Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sptbn4E9PX29 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sptbn4E9PX29 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sptbn4E9PX29 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sptbn4E9PX29 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Sptbn4E9PX29 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sptbn4E9PX29 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Sptbn4E9PX29 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.24■□□□□ 0.03
Sptbn4E9PX29 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sptbn4E9PX29 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.24■□□□□ 0.03
Sptbn4E9PX29 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sptbn4E9PX29 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Sptbn4E9PX29 Gm27494-201ENSMUST00000184735 189 ntBASIC15.23■□□□□ 0.03
Sptbn4E9PX29 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.23■□□□□ 0.03
Sptbn4E9PX29 Gm18421-201ENSMUST00000204122 625 ntBASIC15.23■□□□□ 0.03
Sptbn4E9PX29 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sptbn4E9PX29 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sptbn4E9PX29 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.23■□□□□ 0.03
Sptbn4E9PX29 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Sptbn4E9PX29 Gm13186-201ENSMUST00000118031 316 ntBASIC15.23■□□□□ 0.03
Sptbn4E9PX29 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sptbn4E9PX29 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.23■□□□□ 0.03
Sptbn4E9PX29 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sptbn4E9PX29 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.23■□□□□ 0.03
Sptbn4E9PX29 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Gm5312-201ENSMUST00000203728 547 ntBASIC15.22■□□□□ 0.03
Sptbn4E9PX29 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Gm44430-201ENSMUST00000203376 995 ntBASIC15.22■□□□□ 0.03
Sptbn4E9PX29 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sptbn4E9PX29 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sptbn4E9PX29 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sptbn4E9PX29 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Sptbn4E9PX29 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.21■□□□□ 0.03
Sptbn4E9PX29 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.21■□□□□ 0.03
Sptbn4E9PX29 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Sptbn4E9PX29 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sptbn4E9PX29 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.21■□□□□ 0.03
Sptbn4E9PX29 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.21■□□□□ 0.03
Sptbn4E9PX29 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Sptbn4E9PX29 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sptbn4E9PX29 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.21■□□□□ 0.03
Sptbn4E9PX29 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sptbn4E9PX29 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sptbn4E9PX29 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Sptbn4E9PX29 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Sptbn4E9PX29 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Sptbn4E9PX29 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sptbn4E9PX29 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Sptbn4E9PX29 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sptbn4E9PX29 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.21■□□□□ 0.02
Sptbn4E9PX29 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sptbn4E9PX29 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sptbn4E9PX29 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sptbn4E9PX29 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sptbn4E9PX29 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sptbn4E9PX29 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sptbn4E9PX29 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.2■□□□□ 0.02
Sptbn4E9PX29 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sptbn4E9PX29 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.2■□□□□ 0.02
Sptbn4E9PX29 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.2■□□□□ 0.02
Sptbn4E9PX29 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sptbn4E9PX29 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sptbn4E9PX29 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Sptbn4E9PX29 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sptbn4E9PX29 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sptbn4E9PX29 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sptbn4E9PX29 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.2■□□□□ 0.02
Sptbn4E9PX29 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sptbn4E9PX29 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sptbn4E9PX29 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.2■□□□□ 0.02
Sptbn4E9PX29 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms