Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx8D3YU81 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx8D3YU81 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx8D3YU81 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Rfx8D3YU81 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx8D3YU81 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx8D3YU81 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx8D3YU81 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.97■□□□□ 0.47
Rfx8D3YU81 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx8D3YU81 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx8D3YU81 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx8D3YU81 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.97■□□□□ 0.47
Rfx8D3YU81 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx8D3YU81 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.97■□□□□ 0.47
Rfx8D3YU81 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx8D3YU81 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx8D3YU81 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx8D3YU81 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx8D3YU81 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Rfx8D3YU81 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx8D3YU81 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx8D3YU81 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx8D3YU81 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx8D3YU81 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx8D3YU81 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx8D3YU81 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx8D3YU81 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rfx8D3YU81 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx8D3YU81 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rfx8D3YU81 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Rfx8D3YU81 Gm7791-201ENSMUST00000219066 539 ntBASIC17.96■□□□□ 0.47
Rfx8D3YU81 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx8D3YU81 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx8D3YU81 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Rfx8D3YU81 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx8D3YU81 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.96■□□□□ 0.47
Rfx8D3YU81 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx8D3YU81 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rfx8D3YU81 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.95■□□□□ 0.46
Rfx8D3YU81 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx8D3YU81 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rfx8D3YU81 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.95■□□□□ 0.46
Rfx8D3YU81 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rfx8D3YU81 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx8D3YU81 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx8D3YU81 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx8D3YU81 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx8D3YU81 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rfx8D3YU81 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx8D3YU81 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx8D3YU81 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx8D3YU81 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx8D3YU81 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Rfx8D3YU81 Haglr-201ENSMUST00000100000 2085 ntBASIC17.94■□□□□ 0.46
Rfx8D3YU81 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx8D3YU81 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx8D3YU81 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx8D3YU81 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx8D3YU81 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx8D3YU81 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx8D3YU81 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.94■□□□□ 0.46
Rfx8D3YU81 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx8D3YU81 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx8D3YU81 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx8D3YU81 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx8D3YU81 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.94■□□□□ 0.46
Rfx8D3YU81 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx8D3YU81 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rfx8D3YU81 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx8D3YU81 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx8D3YU81 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx8D3YU81 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rfx8D3YU81 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx8D3YU81 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx8D3YU81 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.93■□□□□ 0.46
Rfx8D3YU81 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.93■□□□□ 0.46
Rfx8D3YU81 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx8D3YU81 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Rfx8D3YU81 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx8D3YU81 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx8D3YU81 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx8D3YU81 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rfx8D3YU81 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx8D3YU81 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rfx8D3YU81 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx8D3YU81 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Rfx8D3YU81 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx8D3YU81 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.92■□□□□ 0.46
Rfx8D3YU81 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx8D3YU81 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx8D3YU81 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx8D3YU81 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.92■□□□□ 0.46
Rfx8D3YU81 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx8D3YU81 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx8D3YU81 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx8D3YU81 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx8D3YU81 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rfx8D3YU81 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rfx8D3YU81 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx8D3YU81 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms