Protein–RNA interactions for Protein: A2A8L1

Chd5, Chromodomain-helicase-DNA-binding protein 5, mousemouse

Predictions only

Length 1,946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd5A2A8L1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chd5A2A8L1 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd5A2A8L1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd5A2A8L1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd5A2A8L1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd5A2A8L1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd5A2A8L1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd5A2A8L1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd5A2A8L1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd5A2A8L1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd5A2A8L1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd5A2A8L1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chd5A2A8L1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Chd5A2A8L1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd5A2A8L1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chd5A2A8L1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.67■□□□□ 0.74
Chd5A2A8L1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chd5A2A8L1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.67■□□□□ 0.74
Chd5A2A8L1 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.67■□□□□ 0.74
Chd5A2A8L1 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chd5A2A8L1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd5A2A8L1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.67■□□□□ 0.74
Chd5A2A8L1 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.67■□□□□ 0.74
Chd5A2A8L1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Chd5A2A8L1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd5A2A8L1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd5A2A8L1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chd5A2A8L1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd5A2A8L1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chd5A2A8L1 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd5A2A8L1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd5A2A8L1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd5A2A8L1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd5A2A8L1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd5A2A8L1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd5A2A8L1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd5A2A8L1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.66■□□□□ 0.74
Chd5A2A8L1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Chd5A2A8L1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.66■□□□□ 0.74
Chd5A2A8L1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.66■□□□□ 0.74
Chd5A2A8L1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Chd5A2A8L1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd5A2A8L1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Chd5A2A8L1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chd5A2A8L1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Chd5A2A8L1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chd5A2A8L1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Chd5A2A8L1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.65■□□□□ 0.74
Chd5A2A8L1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.65■□□□□ 0.74
Chd5A2A8L1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd5A2A8L1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.65■□□□□ 0.74
Chd5A2A8L1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chd5A2A8L1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chd5A2A8L1 Gm5864-201ENSMUST00000202263 970 ntBASIC19.65■□□□□ 0.74
Chd5A2A8L1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd5A2A8L1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Chd5A2A8L1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chd5A2A8L1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.65■□□□□ 0.74
Chd5A2A8L1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd5A2A8L1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Chd5A2A8L1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Chd5A2A8L1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd5A2A8L1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.64■□□□□ 0.74
Chd5A2A8L1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chd5A2A8L1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chd5A2A8L1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Chd5A2A8L1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Chd5A2A8L1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd5A2A8L1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd5A2A8L1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.64■□□□□ 0.73
Chd5A2A8L1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd5A2A8L1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd5A2A8L1 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd5A2A8L1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd5A2A8L1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd5A2A8L1 Rps4l-201ENSMUST00000071745 943 ntBASIC19.64■□□□□ 0.73
Chd5A2A8L1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd5A2A8L1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd5A2A8L1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd5A2A8L1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd5A2A8L1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd5A2A8L1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Chd5A2A8L1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd5A2A8L1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd5A2A8L1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.63■□□□□ 0.73
Chd5A2A8L1 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.63■□□□□ 0.73
Chd5A2A8L1 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd5A2A8L1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Chd5A2A8L1 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Chd5A2A8L1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd5A2A8L1 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
Chd5A2A8L1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd5A2A8L1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chd5A2A8L1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd5A2A8L1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd5A2A8L1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chd5A2A8L1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd5A2A8L1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chd5A2A8L1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Chd5A2A8L1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms