Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.75□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-4A0A0B4J1K2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Trav9-4A0A0B4J1K2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-4A0A0B4J1K2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-4A0A0B4J1K2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav9-4A0A0B4J1K2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-4A0A0B4J1K2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm15565-201ENSMUST00000118890 427 ntBASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-4A0A0B4J1K2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-4A0A0B4J1K2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms