Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trbv23A0A0A6YWQ1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv23A0A0A6YWQ1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv23A0A0A6YWQ1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv23A0A0A6YWQ1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv23A0A0A6YWQ1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trbv23A0A0A6YWQ1 Gm29257-201ENSMUST00000186115 639 ntBASIC14.61□□□□□ -0.07
Trbv23A0A0A6YWQ1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trbv23A0A0A6YWQ1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.61□□□□□ -0.07
Trbv23A0A0A6YWQ1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.61□□□□□ -0.07
Trbv23A0A0A6YWQ1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.61□□□□□ -0.07
Trbv23A0A0A6YWQ1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv23A0A0A6YWQ1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv23A0A0A6YWQ1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trbv23A0A0A6YWQ1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv23A0A0A6YWQ1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv23A0A0A6YWQ1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv23A0A0A6YWQ1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv23A0A0A6YWQ1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv23A0A0A6YWQ1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.61□□□□□ -0.07
Trbv23A0A0A6YWQ1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv23A0A0A6YWQ1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv23A0A0A6YWQ1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.61□□□□□ -0.07
Trbv23A0A0A6YWQ1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trbv23A0A0A6YWQ1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv23A0A0A6YWQ1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv23A0A0A6YWQ1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.59□□□□□ -0.07
Trbv23A0A0A6YWQ1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trbv23A0A0A6YWQ1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv23A0A0A6YWQ1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv23A0A0A6YWQ1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv23A0A0A6YWQ1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv23A0A0A6YWQ1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.59□□□□□ -0.07
Trbv23A0A0A6YWQ1 Gm26524-201ENSMUST00000192339 390 ntBASIC14.59□□□□□ -0.07
Trbv23A0A0A6YWQ1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv23A0A0A6YWQ1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv23A0A0A6YWQ1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trbv23A0A0A6YWQ1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv23A0A0A6YWQ1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv23A0A0A6YWQ1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv23A0A0A6YWQ1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv23A0A0A6YWQ1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv23A0A0A6YWQ1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv23A0A0A6YWQ1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.59□□□□□ -0.07
Trbv23A0A0A6YWQ1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trbv23A0A0A6YWQ1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trbv23A0A0A6YWQ1 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trbv23A0A0A6YWQ1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Trbv23A0A0A6YWQ1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 Gm44549-201ENSMUST00000208351 577 ntBASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.58□□□□□ -0.08
Trbv23A0A0A6YWQ1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv23A0A0A6YWQ1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv23A0A0A6YWQ1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms