Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Gm24841-201ENSMUST00000158676 357 ntBASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Gm18959-201ENSMUST00000208954 655 ntBASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Gm37194-201ENSMUST00000193092 3031 ntBASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-1A0A075B644 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav13-1A0A075B644 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav13-1A0A075B644 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav13-1A0A075B644 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trav13-1A0A075B644 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-1A0A075B644 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Gm2274-201ENSMUST00000184539 609 ntBASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms