Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Timm23-208ENSMUST00000226683 750 ntBASIC15.75■□□□□ 0.11
Trav1A0A075B5Z4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav1A0A075B5Z4 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav1A0A075B5Z4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav1A0A075B5Z4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav1A0A075B5Z4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav1A0A075B5Z4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav1A0A075B5Z4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav1A0A075B5Z4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav1A0A075B5Z4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav1A0A075B5Z4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav1A0A075B5Z4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav1A0A075B5Z4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.75■□□□□ 0.11
Trav1A0A075B5Z4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav1A0A075B5Z4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav1A0A075B5Z4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav1A0A075B5Z4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav1A0A075B5Z4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav1A0A075B5Z4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav1A0A075B5Z4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trav1A0A075B5Z4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav1A0A075B5Z4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav1A0A075B5Z4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav1A0A075B5Z4 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav1A0A075B5Z4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav1A0A075B5Z4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav1A0A075B5Z4 Gm8520-201ENSMUST00000186517 868 ntBASIC15.72■□□□□ 0.11
Trav1A0A075B5Z4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav1A0A075B5Z4 Odf3b-204ENSMUST00000227834 930 ntBASIC15.72■□□□□ 0.11
Trav1A0A075B5Z4 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav1A0A075B5Z4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trav1A0A075B5Z4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav1A0A075B5Z4 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav1A0A075B5Z4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav1A0A075B5Z4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav1A0A075B5Z4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav1A0A075B5Z4 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav1A0A075B5Z4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav1A0A075B5Z4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav1A0A075B5Z4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav1A0A075B5Z4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav1A0A075B5Z4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav1A0A075B5Z4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav1A0A075B5Z4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav1A0A075B5Z4 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav1A0A075B5Z4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms