Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm28669-201ENSMUST00000188400 100 ntBASIC0.87□□□□□ -2.27
Trim3Q9R1R2 Gm38019-201ENSMUST00000195133 380 ntBASIC0.87□□□□□ -2.27
Trim3Q9R1R2 Gm44057-201ENSMUST00000204547 96 ntBASIC0.87□□□□□ -2.27
Trim3Q9R1R2 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.87□□□□□ -2.27
Trim3Q9R1R2 Gm23679-201ENSMUST00000083161 119 ntBASIC0.87□□□□□ -2.27
Trim3Q9R1R2 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.87□□□□□ -2.27
Trim3Q9R1R2 Gm25506-201ENSMUST00000104339 70 ntBASIC0.86□□□□□ -2.27
Trim3Q9R1R2 Gm25783-201ENSMUST00000122525 190 ntBASIC0.86□□□□□ -2.27
Trim3Q9R1R2 Gm23219-201ENSMUST00000158123 87 ntBASIC0.86□□□□□ -2.27
Trim3Q9R1R2 Gm27974-201ENSMUST00000183415 105 ntBASIC0.86□□□□□ -2.27
Trim3Q9R1R2 Gm44308-201ENSMUST00000197080 99 ntBASIC0.86□□□□□ -2.27
Trim3Q9R1R2 Mir181b-2-201ENSMUST00000083644 89 ntBASIC0.86□□□□□ -2.27
Trim3Q9R1R2 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.85□□□□□ -2.27
Trim3Q9R1R2 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
Trim3Q9R1R2 Gm22163-201ENSMUST00000158408 135 ntBASIC0.85□□□□□ -2.27
Trim3Q9R1R2 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.85□□□□□ -2.27
Trim3Q9R1R2 Gm42988-201ENSMUST00000198116 225 ntBASIC0.85□□□□□ -2.27
Trim3Q9R1R2 Gm22704-201ENSMUST00000083027 137 ntBASIC0.85□□□□□ -2.27
Trim3Q9R1R2 Mir27b-201ENSMUST00000083541 73 ntBASIC0.85□□□□□ -2.27
Trim3Q9R1R2 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
Trim3Q9R1R2 Gm25538-201ENSMUST00000101943 107 ntBASIC0.84□□□□□ -2.27
Trim3Q9R1R2 Gm14568-201ENSMUST00000119321 294 ntBASIC0.84□□□□□ -2.27
Trim3Q9R1R2 Gm23584-201ENSMUST00000157655 129 ntBASIC0.84□□□□□ -2.27
Trim3Q9R1R2 Gm24401-201ENSMUST00000157868 91 ntBASIC0.84□□□□□ -2.27
Trim3Q9R1R2 Gm23002-201ENSMUST00000179221 107 ntBASIC0.84□□□□□ -2.27
Trim3Q9R1R2 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.84□□□□□ -2.28
Trim3Q9R1R2 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.83□□□□□ -2.28
Trim3Q9R1R2 Gm23130-201ENSMUST00000104252 74 ntBASIC0.83□□□□□ -2.28
Trim3Q9R1R2 Gm13797-201ENSMUST00000121792 120 ntBASIC0.83□□□□□ -2.28
Trim3Q9R1R2 Gm24000-201ENSMUST00000158063 89 ntBASIC0.83□□□□□ -2.28
Trim3Q9R1R2 Gm24345-201ENSMUST00000158706 124 ntBASIC0.83□□□□□ -2.28
Trim3Q9R1R2 Gm44301-201ENSMUST00000200362 143 ntBASIC0.83□□□□□ -2.28
Trim3Q9R1R2 Gm36189-201ENSMUST00000204113 523 ntBASIC0.83□□□□□ -2.28
Trim3Q9R1R2 Gm45471-201ENSMUST00000211270 281 ntBASIC0.83□□□□□ -2.28
Trim3Q9R1R2 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.83□□□□□ -2.28
Trim3Q9R1R2 Gm25142-201ENSMUST00000082698 107 ntBASIC0.83□□□□□ -2.28
Trim3Q9R1R2 Gm22689-201ENSMUST00000102452 110 ntBASIC0.82□□□□□ -2.28
Trim3Q9R1R2 Gm23766-201ENSMUST00000103894 80 ntBASIC0.82□□□□□ -2.28
Trim3Q9R1R2 Mir654-201ENSMUST00000104787 84 ntBASIC0.82□□□□□ -2.28
Trim3Q9R1R2 Gm24379-201ENSMUST00000122695 86 ntBASIC0.82□□□□□ -2.28
Trim3Q9R1R2 Gm25949-201ENSMUST00000175333 114 ntBASIC0.82□□□□□ -2.28
Trim3Q9R1R2 Gm27365-201ENSMUST00000184041 177 ntBASIC0.82□□□□□ -2.28
Trim3Q9R1R2 Gm29490-201ENSMUST00000190923 342 ntBASIC0.82□□□□□ -2.28
Trim3Q9R1R2 Gm37715-201ENSMUST00000193206 235 ntBASIC0.82□□□□□ -2.28
Trim3Q9R1R2 Gm44921-201ENSMUST00000205290 301 ntBASIC0.82□□□□□ -2.28
Trim3Q9R1R2 Gm25634-201ENSMUST00000082667 105 ntBASIC0.82□□□□□ -2.28
Trim3Q9R1R2 Gm22358-201ENSMUST00000082877 122 ntBASIC0.82□□□□□ -2.28
Trim3Q9R1R2 Gm25188-201ENSMUST00000083913 122 ntBASIC0.82□□□□□ -2.28
Trim3Q9R1R2 Gm14883-201ENSMUST00000120179 157 ntBASIC0.81□□□□□ -2.28
Trim3Q9R1R2 Gm23466-201ENSMUST00000157133 106 ntBASIC0.81□□□□□ -2.28
Trim3Q9R1R2 Gm22586-201ENSMUST00000157507 122 ntBASIC0.81□□□□□ -2.28
Trim3Q9R1R2 Gm22101-201ENSMUST00000157928 103 ntBASIC0.81□□□□□ -2.28
Trim3Q9R1R2 Gm22515-201ENSMUST00000158273 305 ntBASIC0.81□□□□□ -2.28
Trim3Q9R1R2 Gm22914-201ENSMUST00000175195 77 ntBASIC0.81□□□□□ -2.28
Trim3Q9R1R2 Gm26073-201ENSMUST00000179906 127 ntBASIC0.81□□□□□ -2.28
Trim3Q9R1R2 Gm27656-201ENSMUST00000185055 80 ntBASIC0.81□□□□□ -2.28
Trim3Q9R1R2 Gm27587-201ENSMUST00000185116 163 ntBASIC0.81□□□□□ -2.28
Trim3Q9R1R2 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.81□□□□□ -2.28
Trim3Q9R1R2 Gm19572-201ENSMUST00000214326 338 ntBASIC0.81□□□□□ -2.28
Trim3Q9R1R2 Gm22283-201ENSMUST00000082556 161 ntBASIC0.81□□□□□ -2.28
Trim3Q9R1R2 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Trim3Q9R1R2 Gm22673-201ENSMUST00000104415 131 ntBASIC0.8□□□□□ -2.28
Trim3Q9R1R2 Gm14671-201ENSMUST00000121790 262 ntBASIC0.8□□□□□ -2.28
Trim3Q9R1R2 Gm23655-201ENSMUST00000122627 105 ntBASIC0.8□□□□□ -2.28
Trim3Q9R1R2 Gm25976-201ENSMUST00000158695 130 ntBASIC0.8□□□□□ -2.28
Trim3Q9R1R2 Gm28256-201ENSMUST00000188953 139 ntBASIC0.8□□□□□ -2.28
Trim3Q9R1R2 Gm28559-201ENSMUST00000190532 139 ntBASIC0.8□□□□□ -2.28
Trim3Q9R1R2 Mir468-201ENSMUST00000197332 78 ntBASIC0.8□□□□□ -2.28
Trim3Q9R1R2 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.8□□□□□ -2.28
Trim3Q9R1R2 Gm24311-201ENSMUST00000082570 104 ntBASIC0.8□□□□□ -2.28
Trim3Q9R1R2 Snord89-201ENSMUST00000104516 110 ntBASIC0.79□□□□□ -2.28
Trim3Q9R1R2 Gm24015-201ENSMUST00000157725 232 ntBASIC0.79□□□□□ -2.28
Trim3Q9R1R2 Gm22200-201ENSMUST00000158614 67 ntBASIC0.79□□□□□ -2.28
Trim3Q9R1R2 Gm25643-201ENSMUST00000158874 103 ntBASIC0.79□□□□□ -2.28
Trim3Q9R1R2 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Trim3Q9R1R2 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.79□□□□□ -2.28
Trim3Q9R1R2 Gm25274-201ENSMUST00000104296 135 ntBASIC0.78□□□□□ -2.28
Trim3Q9R1R2 Gm11204-201ENSMUST00000122438 147 ntBASIC0.78□□□□□ -2.28
Trim3Q9R1R2 Gm23340-201ENSMUST00000158955 123 ntBASIC0.78□□□□□ -2.28
Trim3Q9R1R2 Gm25397-201ENSMUST00000176951 92 ntBASIC0.78□□□□□ -2.28
Trim3Q9R1R2 Gm38323-201ENSMUST00000192450 210 ntBASIC0.78□□□□□ -2.28
Trim3Q9R1R2 Gm18213-201ENSMUST00000207850 178 ntBASIC0.78□□□□□ -2.28
Trim3Q9R1R2 AC154245.1-201ENSMUST00000224615 601 ntBASIC0.78□□□□□ -2.28
Trim3Q9R1R2 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
Trim3Q9R1R2 Mir881-201ENSMUST00000104844 78 ntBASIC0.77□□□□□ -2.29
Trim3Q9R1R2 Gm26415-201ENSMUST00000157673 292 ntBASIC0.77□□□□□ -2.29
Trim3Q9R1R2 Gm24880-201ENSMUST00000158776 85 ntBASIC0.77□□□□□ -2.29
Trim3Q9R1R2 Gm25838-201ENSMUST00000158920 120 ntBASIC0.77□□□□□ -2.29
Trim3Q9R1R2 Mir669k-201ENSMUST00000177742 127 ntBASIC0.77□□□□□ -2.29
Trim3Q9R1R2 Gm23003-201ENSMUST00000179948 107 ntBASIC0.77□□□□□ -2.29
Trim3Q9R1R2 Gm25673-201ENSMUST00000179957 127 ntBASIC0.77□□□□□ -2.29
Trim3Q9R1R2 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.77□□□□□ -2.29
Trim3Q9R1R2 Gm45544-201ENSMUST00000211130 88 ntBASIC0.77□□□□□ -2.29
Trim3Q9R1R2 AC165157.3-201ENSMUST00000220815 103 ntBASIC0.77□□□□□ -2.29
Trim3Q9R1R2 Snora20-201ENSMUST00000082703 128 ntBASIC0.77□□□□□ -2.29
Trim3Q9R1R2 Gm22809-201ENSMUST00000082743 156 ntBASIC0.77□□□□□ -2.29
Trim3Q9R1R2 Gm26293-201ENSMUST00000104170 84 ntBASIC0.76□□□□□ -2.29
Trim3Q9R1R2 Gm25878-201ENSMUST00000104327 93 ntBASIC0.76□□□□□ -2.29
Trim3Q9R1R2 Gm22051-201ENSMUST00000117002 127 ntBASIC0.76□□□□□ -2.29
Trim3Q9R1R2 Gm25720-201ENSMUST00000157503 105 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 139.7 ms