Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm24121-201ENSMUST00000102029 106 ntBASIC1.2□□□□□ -2.22
Cpsf3Q9QXK7 Gm26074-201ENSMUST00000104063 129 ntBASIC1.2□□□□□ -2.22
Cpsf3Q9QXK7 Gm26156-201ENSMUST00000116999 123 ntBASIC1.2□□□□□ -2.22
Cpsf3Q9QXK7 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.2□□□□□ -2.22
Cpsf3Q9QXK7 Gm26089-201ENSMUST00000157898 107 ntBASIC1.2□□□□□ -2.22
Cpsf3Q9QXK7 Gm24808-201ENSMUST00000157993 118 ntBASIC1.2□□□□□ -2.22
Cpsf3Q9QXK7 Gm25015-201ENSMUST00000158400 128 ntBASIC1.2□□□□□ -2.22
Cpsf3Q9QXK7 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.2□□□□□ -2.22
Cpsf3Q9QXK7 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC1.2□□□□□ -2.22
Cpsf3Q9QXK7 Gm25935-201ENSMUST00000178746 107 ntBASIC1.2□□□□□ -2.22
Cpsf3Q9QXK7 Gm27894-201ENSMUST00000184177 92 ntBASIC1.2□□□□□ -2.22
Cpsf3Q9QXK7 Mir6375-201ENSMUST00000197176 95 ntBASIC1.2□□□□□ -2.22
Cpsf3Q9QXK7 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.2□□□□□ -2.22
Cpsf3Q9QXK7 Gm24762-201ENSMUST00000083689 104 ntBASIC1.2□□□□□ -2.22
Cpsf3Q9QXK7 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Cpsf3Q9QXK7 Mir880-201ENSMUST00000104809 78 ntBASIC1.19□□□□□ -2.22
Cpsf3Q9QXK7 Gm22051-201ENSMUST00000117002 127 ntBASIC1.19□□□□□ -2.22
Cpsf3Q9QXK7 Gm25069-201ENSMUST00000175238 86 ntBASIC1.19□□□□□ -2.22
Cpsf3Q9QXK7 Gm24154-201ENSMUST00000175261 130 ntBASIC1.19□□□□□ -2.22
Cpsf3Q9QXK7 Gm27476-201ENSMUST00000183366 104 ntBASIC1.19□□□□□ -2.22
Cpsf3Q9QXK7 Gm27419-201ENSMUST00000184576 109 ntBASIC1.19□□□□□ -2.22
Cpsf3Q9QXK7 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.19□□□□□ -2.22
Cpsf3Q9QXK7 Mir384-201ENSMUST00000083565 88 ntBASIC1.19□□□□□ -2.22
Cpsf3Q9QXK7 Snord19-201ENSMUST00000104609 76 ntBASIC1.18□□□□□ -2.22
Cpsf3Q9QXK7 Gm14837-201ENSMUST00000119688 206 ntBASIC1.18□□□□□ -2.22
Cpsf3Q9QXK7 Gm23655-201ENSMUST00000122627 105 ntBASIC1.18□□□□□ -2.22
Cpsf3Q9QXK7 Mir1898-201ENSMUST00000122643 83 ntBASIC1.18□□□□□ -2.22
Cpsf3Q9QXK7 Gm22074-201ENSMUST00000158595 113 ntBASIC1.18□□□□□ -2.22
Cpsf3Q9QXK7 Gm20630-201ENSMUST00000177387 551 ntBASIC1.18□□□□□ -2.22
Cpsf3Q9QXK7 Mir6381-201ENSMUST00000183426 87 ntBASIC1.18□□□□□ -2.22
Cpsf3Q9QXK7 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.18□□□□□ -2.22
Cpsf3Q9QXK7 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.18□□□□□ -2.22
Cpsf3Q9QXK7 Snord89-201ENSMUST00000104516 110 ntBASIC1.17□□□□□ -2.22
Cpsf3Q9QXK7 Gm25783-201ENSMUST00000122525 190 ntBASIC1.17□□□□□ -2.22
Cpsf3Q9QXK7 Gm24345-201ENSMUST00000158706 124 ntBASIC1.17□□□□□ -2.22
Cpsf3Q9QXK7 Gm25749-201ENSMUST00000175485 111 ntBASIC1.17□□□□□ -2.22
Cpsf3Q9QXK7 Gm22802-201ENSMUST00000175621 89 ntBASIC1.17□□□□□ -2.22
Cpsf3Q9QXK7 Mir669k-201ENSMUST00000177742 127 ntBASIC1.17□□□□□ -2.22
Cpsf3Q9QXK7 Gm25673-201ENSMUST00000179957 127 ntBASIC1.17□□□□□ -2.22
Cpsf3Q9QXK7 Gm44353-201ENSMUST00000200618 138 ntBASIC1.17□□□□□ -2.22
Cpsf3Q9QXK7 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Cpsf3Q9QXK7 Gm26293-201ENSMUST00000104170 84 ntBASIC1.16□□□□□ -2.22
Cpsf3Q9QXK7 Mir1904-201ENSMUST00000122702 80 ntBASIC1.16□□□□□ -2.22
Cpsf3Q9QXK7 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.16□□□□□ -2.22
Cpsf3Q9QXK7 Gm26073-201ENSMUST00000179906 127 ntBASIC1.16□□□□□ -2.22
Cpsf3Q9QXK7 Gm27402-201ENSMUST00000183890 120 ntBASIC1.16□□□□□ -2.22
Cpsf3Q9QXK7 Gm6003-201ENSMUST00000187903 463 ntBASIC1.16□□□□□ -2.22
Cpsf3Q9QXK7 Gm44358-201ENSMUST00000196301 98 ntBASIC1.16□□□□□ -2.22
Cpsf3Q9QXK7 Gm26379-202ENSMUST00000200225 132 ntBASIC1.16□□□□□ -2.22
Cpsf3Q9QXK7 mt-Td-201ENSMUST00000082404 70 ntBASIC1.16□□□□□ -2.22
Cpsf3Q9QXK7 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Cpsf3Q9QXK7 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC1.15□□□□□ -2.22
Cpsf3Q9QXK7 Gm26415-201ENSMUST00000157673 292 ntBASIC1.15□□□□□ -2.23
Cpsf3Q9QXK7 Gm24000-201ENSMUST00000158063 89 ntBASIC1.15□□□□□ -2.23
Cpsf3Q9QXK7 Gm23760-201ENSMUST00000158350 116 ntBASIC1.15□□□□□ -2.23
Cpsf3Q9QXK7 Gm22163-201ENSMUST00000158408 135 ntBASIC1.15□□□□□ -2.23
Cpsf3Q9QXK7 Gm26363-201ENSMUST00000158866 83 ntBASIC1.15□□□□□ -2.23
Cpsf3Q9QXK7 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.15□□□□□ -2.23
Cpsf3Q9QXK7 Gm22258-201ENSMUST00000177645 94 ntBASIC1.15□□□□□ -2.23
Cpsf3Q9QXK7 Gm26032-201ENSMUST00000178535 94 ntBASIC1.15□□□□□ -2.23
Cpsf3Q9QXK7 Gm25210-201ENSMUST00000178813 94 ntBASIC1.15□□□□□ -2.23
Cpsf3Q9QXK7 Gm25157-201ENSMUST00000178914 94 ntBASIC1.15□□□□□ -2.23
Cpsf3Q9QXK7 Gm22046-201ENSMUST00000179027 94 ntBASIC1.15□□□□□ -2.23
Cpsf3Q9QXK7 Gm22941-201ENSMUST00000179630 94 ntBASIC1.15□□□□□ -2.23
Cpsf3Q9QXK7 Gm25471-201ENSMUST00000180126 94 ntBASIC1.15□□□□□ -2.23
Cpsf3Q9QXK7 Gm43199-201ENSMUST00000200019 307 ntBASIC1.15□□□□□ -2.23
Cpsf3Q9QXK7 Gm25650-201ENSMUST00000083784 162 ntBASIC1.15□□□□□ -2.23
Cpsf3Q9QXK7 Mir466b-8-201ENSMUST00000103883 86 ntBASIC1.14□□□□□ -2.23
Cpsf3Q9QXK7 Gm26082-201ENSMUST00000104070 127 ntBASIC1.14□□□□□ -2.23
Cpsf3Q9QXK7 Gm25315-201ENSMUST00000116823 121 ntBASIC1.14□□□□□ -2.23
Cpsf3Q9QXK7 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.14□□□□□ -2.23
Cpsf3Q9QXK7 Gm23584-201ENSMUST00000157655 129 ntBASIC1.14□□□□□ -2.23
Cpsf3Q9QXK7 Gm27579-201ENSMUST00000158113 63 ntBASIC1.14□□□□□ -2.23
Cpsf3Q9QXK7 Gm25768-201ENSMUST00000158570 98 ntBASIC1.14□□□□□ -2.23
Cpsf3Q9QXK7 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Cpsf3Q9QXK7 Mir466e-201ENSMUST00000198862 84 ntBASIC1.14□□□□□ -2.23
Cpsf3Q9QXK7 Mir466c-1-201ENSMUST00000200654 84 ntBASIC1.14□□□□□ -2.23
Cpsf3Q9QXK7 Mir22-201ENSMUST00000083595 95 ntBASIC1.14□□□□□ -2.23
Cpsf3Q9QXK7 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Cpsf3Q9QXK7 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.13□□□□□ -2.23
Cpsf3Q9QXK7 Mir654-201ENSMUST00000104787 84 ntBASIC1.13□□□□□ -2.23
Cpsf3Q9QXK7 Gm24385-201ENSMUST00000122694 350 ntBASIC1.13□□□□□ -2.23
Cpsf3Q9QXK7 Gm23329-201ENSMUST00000157415 108 ntBASIC1.13□□□□□ -2.23
Cpsf3Q9QXK7 Gm24942-201ENSMUST00000158328 114 ntBASIC1.13□□□□□ -2.23
Cpsf3Q9QXK7 Gm25654-201ENSMUST00000158467 88 ntBASIC1.13□□□□□ -2.23
Cpsf3Q9QXK7 Gm23141-201ENSMUST00000178682 94 ntBASIC1.13□□□□□ -2.23
Cpsf3Q9QXK7 Mir7059-201ENSMUST00000184825 59 ntBASIC1.13□□□□□ -2.23
Cpsf3Q9QXK7 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.13□□□□□ -2.23
Cpsf3Q9QXK7 Gm45544-201ENSMUST00000211130 88 ntBASIC1.13□□□□□ -2.23
Cpsf3Q9QXK7 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.13□□□□□ -2.23
Cpsf3Q9QXK7 Gm26224-201ENSMUST00000082506 80 ntBASIC1.13□□□□□ -2.23
Cpsf3Q9QXK7 Gm22283-201ENSMUST00000082556 161 ntBASIC1.13□□□□□ -2.23
Cpsf3Q9QXK7 Gm22744-201ENSMUST00000083444 65 ntBASIC1.13□□□□□ -2.23
Cpsf3Q9QXK7 Mir196b-201ENSMUST00000083509 85 ntBASIC1.13□□□□□ -2.23
Cpsf3Q9QXK7 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.13□□□□□ -2.23
Cpsf3Q9QXK7 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.12□□□□□ -2.23
Cpsf3Q9QXK7 Gm25949-201ENSMUST00000175333 114 ntBASIC1.12□□□□□ -2.23
Cpsf3Q9QXK7 Gm28862-201ENSMUST00000188246 163 ntBASIC1.12□□□□□ -2.23
Cpsf3Q9QXK7 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.12□□□□□ -2.23
Cpsf3Q9QXK7 Gm22686-201ENSMUST00000082847 100 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms