Protein–RNA interactions for Protein: Q9QXD8

Limd1, LIM domain-containing protein 1, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd1Q9QXD8 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.16□□□□□ -1.9
Limd1Q9QXD8 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Limd1Q9QXD8 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Limd1Q9QXD8 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
Limd1Q9QXD8 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Limd1Q9QXD8 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Limd1Q9QXD8 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Limd1Q9QXD8 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Limd1Q9QXD8 Gm25526-201ENSMUST00000104332 132 ntBASIC3.15□□□□□ -1.91
Limd1Q9QXD8 Gm22071-201ENSMUST00000116857 83 ntBASIC3.15□□□□□ -1.91
Limd1Q9QXD8 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Limd1Q9QXD8 Mir490-201ENSMUST00000093567 84 ntBASIC3.15□□□□□ -1.91
Limd1Q9QXD8 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Limd1Q9QXD8 AC122828.3-201ENSMUST00000223019 3915 ntBASIC3.15□□□□□ -1.91
Limd1Q9QXD8 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Limd1Q9QXD8 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Limd1Q9QXD8 Gm23128-201ENSMUST00000104257 132 ntBASIC3.14□□□□□ -1.91
Limd1Q9QXD8 Gm26247-201ENSMUST00000116702 91 ntBASIC3.14□□□□□ -1.91
Limd1Q9QXD8 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Limd1Q9QXD8 Gm24649-201ENSMUST00000157106 134 ntBASIC3.14□□□□□ -1.91
Limd1Q9QXD8 Mir3092-201ENSMUST00000174954 96 ntBASIC3.14□□□□□ -1.91
Limd1Q9QXD8 Gm23128-202ENSMUST00000196578 133 ntBASIC3.14□□□□□ -1.91
Limd1Q9QXD8 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Limd1Q9QXD8 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Limd1Q9QXD8 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Limd1Q9QXD8 Gm22319-201ENSMUST00000157147 122 ntBASIC3.13□□□□□ -1.91
Limd1Q9QXD8 Gm22888-201ENSMUST00000158640 77 ntBASIC3.13□□□□□ -1.91
Limd1Q9QXD8 Gm23370-201ENSMUST00000199545 130 ntBASIC3.13□□□□□ -1.91
Limd1Q9QXD8 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.13□□□□□ -1.91
Limd1Q9QXD8 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Limd1Q9QXD8 DQ267100-201ENSMUST00000122600 72 ntBASIC3.12□□□□□ -1.91
Limd1Q9QXD8 Gm15733-201ENSMUST00000132957 242 ntBASIC3.12□□□□□ -1.91
Limd1Q9QXD8 Gm24443-201ENSMUST00000157242 132 ntBASIC3.12□□□□□ -1.91
Limd1Q9QXD8 Gm22963-201ENSMUST00000157960 91 ntBASIC3.12□□□□□ -1.91
Limd1Q9QXD8 Gm22961-201ENSMUST00000157964 106 ntBASIC3.12□□□□□ -1.91
Limd1Q9QXD8 Gm24851-201ENSMUST00000158028 103 ntBASIC3.12□□□□□ -1.91
Limd1Q9QXD8 Gm23384-201ENSMUST00000158593 103 ntBASIC3.12□□□□□ -1.91
Limd1Q9QXD8 Traj61-201ENSMUST00000165025 72 ntBASIC3.12□□□□□ -1.91
Limd1Q9QXD8 Trbv7-201ENSMUST00000193339 402 ntBASIC3.12□□□□□ -1.91
Limd1Q9QXD8 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Limd1Q9QXD8 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.12□□□□□ -1.91
Limd1Q9QXD8 Gm45452-201ENSMUST00000210905 177 ntBASIC3.12□□□□□ -1.91
Limd1Q9QXD8 AC126691.1-201ENSMUST00000226534 202 ntBASIC3.12□□□□□ -1.91
Limd1Q9QXD8 Snora20-201ENSMUST00000082703 128 ntBASIC3.12□□□□□ -1.91
Limd1Q9QXD8 Gm23790-201ENSMUST00000083013 107 ntBASIC3.12□□□□□ -1.91
Limd1Q9QXD8 Gm24697-201ENSMUST00000083881 107 ntBASIC3.12□□□□□ -1.91
Limd1Q9QXD8 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Limd1Q9QXD8 AL645643.1-201ENSMUST00000222438 3897 ntBASIC3.12□□□□□ -1.91
Limd1Q9QXD8 Gm27700-201ENSMUST00000185003 81 ntBASIC3.11□□□□□ -1.91
Limd1Q9QXD8 Gm6109-201ENSMUST00000223297 348 ntBASIC3.11□□□□□ -1.91
Limd1Q9QXD8 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Limd1Q9QXD8 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Limd1Q9QXD8 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Limd1Q9QXD8 Gm25153-201ENSMUST00000157118 156 ntBASIC3.1□□□□□ -1.91
Limd1Q9QXD8 Mir3076-201ENSMUST00000175415 60 ntBASIC3.1□□□□□ -1.91
Limd1Q9QXD8 Snord93-201ENSMUST00000175580 71 ntBASIC3.1□□□□□ -1.91
Limd1Q9QXD8 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.1□□□□□ -1.91
Limd1Q9QXD8 Gm24524-201ENSMUST00000082925 170 ntBASIC3.1□□□□□ -1.91
Limd1Q9QXD8 Snord7-201ENSMUST00000083781 97 ntBASIC3.1□□□□□ -1.91
Limd1Q9QXD8 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Limd1Q9QXD8 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
Limd1Q9QXD8 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Limd1Q9QXD8 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Limd1Q9QXD8 Mir878-201ENSMUST00000104680 78 ntBASIC3.09□□□□□ -1.91
Limd1Q9QXD8 Mir880-201ENSMUST00000104809 78 ntBASIC3.09□□□□□ -1.91
Limd1Q9QXD8 Mir466k-201ENSMUST00000116774 122 ntBASIC3.09□□□□□ -1.91
Limd1Q9QXD8 Gm24656-201ENSMUST00000177548 132 ntBASIC3.09□□□□□ -1.91
Limd1Q9QXD8 Mir7242-201ENSMUST00000183710 79 ntBASIC3.09□□□□□ -1.91
Limd1Q9QXD8 Mir6388-201ENSMUST00000184417 75 ntBASIC3.09□□□□□ -1.91
Limd1Q9QXD8 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.09□□□□□ -1.91
Limd1Q9QXD8 Gm25855-201ENSMUST00000082787 72 ntBASIC3.09□□□□□ -1.91
Limd1Q9QXD8 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Limd1Q9QXD8 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Limd1Q9QXD8 Gm11414-201ENSMUST00000121795 263 ntBASIC3.08□□□□□ -1.92
Limd1Q9QXD8 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC3.08□□□□□ -1.92
Limd1Q9QXD8 Gm24922-201ENSMUST00000158511 102 ntBASIC3.08□□□□□ -1.92
Limd1Q9QXD8 Mir3103-201ENSMUST00000175474 67 ntBASIC3.08□□□□□ -1.92
Limd1Q9QXD8 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC3.08□□□□□ -1.92
Limd1Q9QXD8 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.08□□□□□ -1.92
Limd1Q9QXD8 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Limd1Q9QXD8 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Limd1Q9QXD8 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.07□□□□□ -1.92
Limd1Q9QXD8 Gm24890-201ENSMUST00000104389 102 ntBASIC3.07□□□□□ -1.92
Limd1Q9QXD8 n-R5s26-201ENSMUST00000104601 122 ntBASIC3.07□□□□□ -1.92
Limd1Q9QXD8 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC3.07□□□□□ -1.92
Limd1Q9QXD8 Gm23986-201ENSMUST00000157144 63 ntBASIC3.07□□□□□ -1.92
Limd1Q9QXD8 Gm25633-201ENSMUST00000178565 107 ntBASIC3.07□□□□□ -1.92
Limd1Q9QXD8 Gm37007-201ENSMUST00000194234 319 ntBASIC3.07□□□□□ -1.92
Limd1Q9QXD8 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC3.07□□□□□ -1.92
Limd1Q9QXD8 Gm22805-201ENSMUST00000082739 107 ntBASIC3.07□□□□□ -1.92
Limd1Q9QXD8 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Limd1Q9QXD8 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Limd1Q9QXD8 n-R5s200-201ENSMUST00000104194 113 ntBASIC3.06□□□□□ -1.92
Limd1Q9QXD8 Gm23601-201ENSMUST00000157259 131 ntBASIC3.06□□□□□ -1.92
Limd1Q9QXD8 Gm23349-201ENSMUST00000158432 98 ntBASIC3.06□□□□□ -1.92
Limd1Q9QXD8 Gm26004-201ENSMUST00000158804 116 ntBASIC3.06□□□□□ -1.92
Limd1Q9QXD8 Gm22500-201ENSMUST00000158982 99 ntBASIC3.06□□□□□ -1.92
Limd1Q9QXD8 Gm24333-201ENSMUST00000175101 84 ntBASIC3.06□□□□□ -1.92
Limd1Q9QXD8 Gm25476-201ENSMUST00000175125 185 ntBASIC3.06□□□□□ -1.92
Limd1Q9QXD8 Gm20718-201ENSMUST00000176058 259 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 175.4 ms