Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC-0.43□□□□□ -2.48
Trem3Q9JKE1 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC-0.43□□□□□ -2.48
Trem3Q9JKE1 Gm26071-201ENSMUST00000083261 107 ntBASIC-0.43□□□□□ -2.48
Trem3Q9JKE1 Mir18-201ENSMUST00000083469 96 ntBASIC-0.43□□□□□ -2.48
Trem3Q9JKE1 Gm24509-201ENSMUST00000157086 101 ntBASIC-0.44□□□□□ -2.48
Trem3Q9JKE1 Gm25358-201ENSMUST00000157189 101 ntBASIC-0.44□□□□□ -2.48
Trem3Q9JKE1 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.44□□□□□ -2.48
Trem3Q9JKE1 Gm25444-201ENSMUST00000158999 113 ntBASIC-0.44□□□□□ -2.48
Trem3Q9JKE1 Gm23148-201ENSMUST00000180367 107 ntBASIC-0.44□□□□□ -2.48
Trem3Q9JKE1 Gm27410-201ENSMUST00000183851 115 ntBASIC-0.44□□□□□ -2.48
Trem3Q9JKE1 Gm10105-201ENSMUST00000184601 270 ntBASIC-0.44□□□□□ -2.48
Trem3Q9JKE1 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC-0.44□□□□□ -2.48
Trem3Q9JKE1 AC166358.10-201ENSMUST00000220556 144 ntBASIC-0.44□□□□□ -2.48
Trem3Q9JKE1 Gm25258-201ENSMUST00000083049 107 ntBASIC-0.44□□□□□ -2.48
Trem3Q9JKE1 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.45□□□□□ -2.48
Trem3Q9JKE1 Gm22656-201ENSMUST00000104199 171 ntBASIC-0.45□□□□□ -2.48
Trem3Q9JKE1 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.45□□□□□ -2.48
Trem3Q9JKE1 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.45□□□□□ -2.48
Trem3Q9JKE1 Gm28597-201ENSMUST00000187664 666 ntBASIC-0.45□□□□□ -2.48
Trem3Q9JKE1 Mir7661-201ENSMUST00000197023 61 ntBASIC-0.45□□□□□ -2.48
Trem3Q9JKE1 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC-0.45□□□□□ -2.48
Trem3Q9JKE1 Gm23625-201ENSMUST00000082457 100 ntBASIC-0.45□□□□□ -2.48
Trem3Q9JKE1 Gm23301-201ENSMUST00000082713 65 ntBASIC-0.45□□□□□ -2.48
Trem3Q9JKE1 Gm24043-201ENSMUST00000083108 116 ntBASIC-0.45□□□□□ -2.48
Trem3Q9JKE1 Gm25241-201ENSMUST00000174909 84 ntBASIC-0.46□□□□□ -2.48
Trem3Q9JKE1 Gm26217-201ENSMUST00000175212 84 ntBASIC-0.46□□□□□ -2.48
Trem3Q9JKE1 Gm23660-201ENSMUST00000178362 79 ntBASIC-0.46□□□□□ -2.48
Trem3Q9JKE1 Gm24088-201ENSMUST00000179100 79 ntBASIC-0.46□□□□□ -2.48
Trem3Q9JKE1 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.46□□□□□ -2.48
Trem3Q9JKE1 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.46□□□□□ -2.48
Trem3Q9JKE1 Gm22387-201ENSMUST00000158191 131 ntBASIC-0.47□□□□□ -2.48
Trem3Q9JKE1 Gm22841-201ENSMUST00000158443 62 ntBASIC-0.47□□□□□ -2.48
Trem3Q9JKE1 Gm23921-201ENSMUST00000175258 107 ntBASIC-0.47□□□□□ -2.48
Trem3Q9JKE1 Gm25671-201ENSMUST00000178612 105 ntBASIC-0.47□□□□□ -2.48
Trem3Q9JKE1 Gm23307-201ENSMUST00000179167 105 ntBASIC-0.47□□□□□ -2.48
Trem3Q9JKE1 Gm25286-201ENSMUST00000179790 105 ntBASIC-0.47□□□□□ -2.48
Trem3Q9JKE1 Mir7079-201ENSMUST00000184697 69 ntBASIC-0.47□□□□□ -2.48
Trem3Q9JKE1 Gm28330-201ENSMUST00000190353 171 ntBASIC-0.47□□□□□ -2.48
Trem3Q9JKE1 Gm44464-201ENSMUST00000198010 138 ntBASIC-0.47□□□□□ -2.48
Trem3Q9JKE1 Gm44811-201ENSMUST00000209120 228 ntBASIC-0.47□□□□□ -2.48
Trem3Q9JKE1 Gm25078-201ENSMUST00000082530 107 ntBASIC-0.47□□□□□ -2.48
Trem3Q9JKE1 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.47□□□□□ -2.48
Trem3Q9JKE1 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.47□□□□□ -2.48
Trem3Q9JKE1 Mir532-201ENSMUST00000093630 96 ntBASIC-0.47□□□□□ -2.48
Trem3Q9JKE1 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-0.48□□□□□ -2.49
Trem3Q9JKE1 Gm15719-201ENSMUST00000120619 635 ntBASIC-0.48□□□□□ -2.49
Trem3Q9JKE1 Gm15213-201ENSMUST00000122098 216 ntBASIC-0.48□□□□□ -2.49
Trem3Q9JKE1 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
Trem3Q9JKE1 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.48□□□□□ -2.49
Trem3Q9JKE1 Mir721-201ENSMUST00000200230 88 ntBASIC-0.48□□□□□ -2.49
Trem3Q9JKE1 Gm42857-201ENSMUST00000200823 339 ntBASIC-0.48□□□□□ -2.49
Trem3Q9JKE1 AC116589.3-202ENSMUST00000221770 649 ntBASIC-0.48□□□□□ -2.49
Trem3Q9JKE1 AC116589.6-201ENSMUST00000222252 649 ntBASIC-0.48□□□□□ -2.49
Trem3Q9JKE1 Mir377-201ENSMUST00000083504 68 ntBASIC-0.48□□□□□ -2.49
Trem3Q9JKE1 Gm25559-201ENSMUST00000157182 74 ntBASIC-0.49□□□□□ -2.49
Trem3Q9JKE1 Gm22814-201ENSMUST00000157452 104 ntBASIC-0.49□□□□□ -2.49
Trem3Q9JKE1 Gm23783-201ENSMUST00000157941 102 ntBASIC-0.49□□□□□ -2.49
Trem3Q9JKE1 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.49□□□□□ -2.49
Trem3Q9JKE1 Gm23191-201ENSMUST00000179147 107 ntBASIC-0.49□□□□□ -2.49
Trem3Q9JKE1 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC-0.49□□□□□ -2.49
Trem3Q9JKE1 Gm27993-201ENSMUST00000184362 85 ntBASIC-0.49□□□□□ -2.49
Trem3Q9JKE1 Mir376a-201ENSMUST00000197584 68 ntBASIC-0.49□□□□□ -2.49
Trem3Q9JKE1 Gm26329-201ENSMUST00000093723 110 ntBASIC-0.49□□□□□ -2.49
Trem3Q9JKE1 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.5□□□□□ -2.49
Trem3Q9JKE1 Gm15899-201ENSMUST00000128586 238 ntBASIC-0.5□□□□□ -2.49
Trem3Q9JKE1 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.5□□□□□ -2.49
Trem3Q9JKE1 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.5□□□□□ -2.49
Trem3Q9JKE1 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-0.5□□□□□ -2.49
Trem3Q9JKE1 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.5□□□□□ -2.49
Trem3Q9JKE1 AC153541.1-201ENSMUST00000213786 294 ntBASIC-0.5□□□□□ -2.49
Trem3Q9JKE1 AC102369.1-201ENSMUST00000218415 373 ntBASIC-0.5□□□□□ -2.49
Trem3Q9JKE1 Gm23140-201ENSMUST00000082487 107 ntBASIC-0.5□□□□□ -2.49
Trem3Q9JKE1 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.51□□□□□ -2.49
Trem3Q9JKE1 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC-0.51□□□□□ -2.49
Trem3Q9JKE1 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC-0.51□□□□□ -2.49
Trem3Q9JKE1 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC-0.51□□□□□ -2.49
Trem3Q9JKE1 Gm13059-201ENSMUST00000119881 398 ntBASIC-0.51□□□□□ -2.49
Trem3Q9JKE1 Gm24438-201ENSMUST00000157893 115 ntBASIC-0.51□□□□□ -2.49
Trem3Q9JKE1 Gm27919-201ENSMUST00000185163 107 ntBASIC-0.51□□□□□ -2.49
Trem3Q9JKE1 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.51□□□□□ -2.49
Trem3Q9JKE1 AL627387.1-201ENSMUST00000226063 250 ntBASIC-0.51□□□□□ -2.49
Trem3Q9JKE1 Snora75-201ENSMUST00000082903 133 ntBASIC-0.51□□□□□ -2.49
Trem3Q9JKE1 Gm22421-201ENSMUST00000083058 107 ntBASIC-0.51□□□□□ -2.49
Trem3Q9JKE1 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.52□□□□□ -2.49
Trem3Q9JKE1 Gm23536-201ENSMUST00000157541 134 ntBASIC-0.52□□□□□ -2.49
Trem3Q9JKE1 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.52□□□□□ -2.49
Trem3Q9JKE1 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC-0.52□□□□□ -2.49
Trem3Q9JKE1 Gm45673-201ENSMUST00000210293 358 ntBASIC-0.52□□□□□ -2.49
Trem3Q9JKE1 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-0.52□□□□□ -2.49
Trem3Q9JKE1 Gm25538-201ENSMUST00000101943 107 ntBASIC-0.53□□□□□ -2.49
Trem3Q9JKE1 Gm12785-201ENSMUST00000122052 172 ntBASIC-0.53□□□□□ -2.49
Trem3Q9JKE1 Gm23994-201ENSMUST00000158059 88 ntBASIC-0.53□□□□□ -2.49
Trem3Q9JKE1 Gm25450-201ENSMUST00000179144 107 ntBASIC-0.53□□□□□ -2.49
Trem3Q9JKE1 AC162857.1-201ENSMUST00000226614 400 ntBASIC-0.53□□□□□ -2.49
Trem3Q9JKE1 AC115735.2-201ENSMUST00000227135 351 ntBASIC-0.53□□□□□ -2.49
Trem3Q9JKE1 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.53□□□□□ -2.49
Trem3Q9JKE1 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.53□□□□□ -2.49
Trem3Q9JKE1 Gm26107-201ENSMUST00000083972 107 ntBASIC-0.53□□□□□ -2.49
Trem3Q9JKE1 Gm3867-201ENSMUST00000086108 279 ntBASIC-0.53□□□□□ -2.49
Trem3Q9JKE1 Mir496a-201ENSMUST00000093627 79 ntBASIC-0.53□□□□□ -2.49
Retrieved 100 of 76,532 protein–RNA pairs in 130.9 ms