Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Trim54Q9ERP3 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Trim54Q9ERP3 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.62□□□□□ -2.15
Trim54Q9ERP3 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Trim54Q9ERP3 Gm24015-201ENSMUST00000157725 232 ntBASIC1.62□□□□□ -2.15
Trim54Q9ERP3 Gm24677-201ENSMUST00000158755 150 ntBASIC1.62□□□□□ -2.15
Trim54Q9ERP3 Gm24174-201ENSMUST00000158933 111 ntBASIC1.62□□□□□ -2.15
Trim54Q9ERP3 Mir6350-201ENSMUST00000183639 105 ntBASIC1.62□□□□□ -2.15
Trim54Q9ERP3 Gm28669-201ENSMUST00000188400 100 ntBASIC1.62□□□□□ -2.15
Trim54Q9ERP3 Mir1a-2-201ENSMUST00000198520 72 ntBASIC1.62□□□□□ -2.15
Trim54Q9ERP3 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.62□□□□□ -2.15
Trim54Q9ERP3 Gm23461-201ENSMUST00000083265 107 ntBASIC1.62□□□□□ -2.15
Trim54Q9ERP3 Gm22743-201ENSMUST00000083445 133 ntBASIC1.62□□□□□ -2.15
Trim54Q9ERP3 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.62□□□□□ -2.15
Trim54Q9ERP3 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.61□□□□□ -2.15
Trim54Q9ERP3 Gm25750-201ENSMUST00000175483 112 ntBASIC1.61□□□□□ -2.15
Trim54Q9ERP3 Gm27248-201ENSMUST00000184004 166 ntBASIC1.61□□□□□ -2.15
Trim54Q9ERP3 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Trim54Q9ERP3 Mir7665-201ENSMUST00000184907 63 ntBASIC1.61□□□□□ -2.15
Trim54Q9ERP3 Gm44921-201ENSMUST00000205290 301 ntBASIC1.61□□□□□ -2.15
Trim54Q9ERP3 Gm45002-201ENSMUST00000208045 120 ntBASIC1.61□□□□□ -2.15
Trim54Q9ERP3 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Trim54Q9ERP3 Gm23060-201ENSMUST00000102345 109 ntBASIC1.6□□□□□ -2.15
Trim54Q9ERP3 Gm24171-201ENSMUST00000104126 131 ntBASIC1.6□□□□□ -2.15
Trim54Q9ERP3 Gm22149-201ENSMUST00000104442 136 ntBASIC1.6□□□□□ -2.15
Trim54Q9ERP3 Gm25316-201ENSMUST00000116826 118 ntBASIC1.6□□□□□ -2.15
Trim54Q9ERP3 Mir467g-201ENSMUST00000116906 120 ntBASIC1.6□□□□□ -2.15
Trim54Q9ERP3 Gm15069-201ENSMUST00000117792 192 ntBASIC1.6□□□□□ -2.15
Trim54Q9ERP3 Gm6952-201ENSMUST00000118629 159 ntBASIC1.6□□□□□ -2.15
Trim54Q9ERP3 Gm15068-201ENSMUST00000119796 192 ntBASIC1.6□□□□□ -2.15
Trim54Q9ERP3 Gm25323-201ENSMUST00000122555 103 ntBASIC1.6□□□□□ -2.15
Trim54Q9ERP3 Gm24262-201ENSMUST00000157431 144 ntBASIC1.6□□□□□ -2.15
Trim54Q9ERP3 Gm22163-201ENSMUST00000158408 135 ntBASIC1.6□□□□□ -2.15
Trim54Q9ERP3 Gm25464-201ENSMUST00000175481 107 ntBASIC1.6□□□□□ -2.15
Trim54Q9ERP3 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.6□□□□□ -2.15
Trim54Q9ERP3 Gm22884-201ENSMUST00000083127 140 ntBASIC1.6□□□□□ -2.15
Trim54Q9ERP3 Mir302d-201ENSMUST00000083513 66 ntBASIC1.6□□□□□ -2.15
Trim54Q9ERP3 Mir471-201ENSMUST00000093596 67 ntBASIC1.6□□□□□ -2.15
Trim54Q9ERP3 Gm25541-201ENSMUST00000116888 126 ntBASIC1.59□□□□□ -2.15
Trim54Q9ERP3 Gm13246-201ENSMUST00000120994 315 ntBASIC1.59□□□□□ -2.15
Trim54Q9ERP3 Gm26049-201ENSMUST00000157313 108 ntBASIC1.59□□□□□ -2.15
Trim54Q9ERP3 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.59□□□□□ -2.15
Trim54Q9ERP3 Mir5104-201ENSMUST00000175319 94 ntBASIC1.59□□□□□ -2.15
Trim54Q9ERP3 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.59□□□□□ -2.15
Trim54Q9ERP3 Gm24523-201ENSMUST00000083965 132 ntBASIC1.59□□□□□ -2.15
Trim54Q9ERP3 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.59□□□□□ -2.16
Trim54Q9ERP3 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.58□□□□□ -2.16
Trim54Q9ERP3 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Trim54Q9ERP3 Mir3061-201ENSMUST00000175129 91 ntBASIC1.58□□□□□ -2.16
Trim54Q9ERP3 Gm27285-201ENSMUST00000183875 127 ntBASIC1.58□□□□□ -2.16
Trim54Q9ERP3 Gm25410-201ENSMUST00000083758 137 ntBASIC1.58□□□□□ -2.16
Trim54Q9ERP3 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
Trim54Q9ERP3 Mir544-201ENSMUST00000103813 78 ntBASIC1.57□□□□□ -2.16
Trim54Q9ERP3 Mir466h-201ENSMUST00000104748 81 ntBASIC1.57□□□□□ -2.16
Trim54Q9ERP3 Gm11856-201ENSMUST00000118712 276 ntBASIC1.57□□□□□ -2.16
Trim54Q9ERP3 Gm14671-201ENSMUST00000121790 262 ntBASIC1.57□□□□□ -2.16
Trim54Q9ERP3 Gm11334-201ENSMUST00000121969 156 ntBASIC1.57□□□□□ -2.16
Trim54Q9ERP3 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.57□□□□□ -2.16
Trim54Q9ERP3 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.57□□□□□ -2.16
Trim54Q9ERP3 Gm22888-201ENSMUST00000158640 77 ntBASIC1.57□□□□□ -2.16
Trim54Q9ERP3 Gm26160-201ENSMUST00000158965 63 ntBASIC1.57□□□□□ -2.16
Trim54Q9ERP3 Gm25936-201ENSMUST00000179952 114 ntBASIC1.57□□□□□ -2.16
Trim54Q9ERP3 Mir7675-201ENSMUST00000184262 58 ntBASIC1.57□□□□□ -2.16
Trim54Q9ERP3 Gm42855-201ENSMUST00000197388 253 ntBASIC1.57□□□□□ -2.16
Trim54Q9ERP3 Mir721-201ENSMUST00000200230 88 ntBASIC1.57□□□□□ -2.16
Trim54Q9ERP3 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.57□□□□□ -2.16
Trim54Q9ERP3 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Trim54Q9ERP3 Mir653-201ENSMUST00000102402 85 ntBASIC1.56□□□□□ -2.16
Trim54Q9ERP3 Gm26038-201ENSMUST00000158151 106 ntBASIC1.56□□□□□ -2.16
Trim54Q9ERP3 Gm44962-201ENSMUST00000206460 279 ntBASIC1.56□□□□□ -2.16
Trim54Q9ERP3 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.56□□□□□ -2.16
Trim54Q9ERP3 Gm24457-201ENSMUST00000083196 105 ntBASIC1.56□□□□□ -2.16
Trim54Q9ERP3 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.56□□□□□ -2.16
Trim54Q9ERP3 Mir880-201ENSMUST00000104809 78 ntBASIC1.55□□□□□ -2.16
Trim54Q9ERP3 Gm23996-201ENSMUST00000158062 131 ntBASIC1.55□□□□□ -2.16
Trim54Q9ERP3 Gm24000-201ENSMUST00000158063 89 ntBASIC1.55□□□□□ -2.16
Trim54Q9ERP3 Gm22403-201ENSMUST00000174919 84 ntBASIC1.55□□□□□ -2.16
Trim54Q9ERP3 Gm43911-201ENSMUST00000203097 76 ntBASIC1.55□□□□□ -2.16
Trim54Q9ERP3 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.55□□□□□ -2.16
Trim54Q9ERP3 Gm25878-201ENSMUST00000104327 93 ntBASIC1.54□□□□□ -2.16
Trim54Q9ERP3 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.54□□□□□ -2.16
Trim54Q9ERP3 Gm22387-201ENSMUST00000158191 131 ntBASIC1.54□□□□□ -2.16
Trim54Q9ERP3 Gm26213-201ENSMUST00000158582 110 ntBASIC1.54□□□□□ -2.16
Trim54Q9ERP3 Gm23864-201ENSMUST00000177607 107 ntBASIC1.54□□□□□ -2.16
Trim54Q9ERP3 Gm38364-201ENSMUST00000191814 179 ntBASIC1.54□□□□□ -2.16
Trim54Q9ERP3 Gm37624-201ENSMUST00000193751 219 ntBASIC1.54□□□□□ -2.16
Trim54Q9ERP3 Gm19790-201ENSMUST00000214414 251 ntBASIC1.54□□□□□ -2.16
Trim54Q9ERP3 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.54□□□□□ -2.16
Trim54Q9ERP3 Gm16976-205ENSMUST00000227324 226 ntBASIC1.54□□□□□ -2.16
Trim54Q9ERP3 Gm26225-201ENSMUST00000082508 135 ntBASIC1.54□□□□□ -2.16
Trim54Q9ERP3 Snord1a-201ENSMUST00000083160 74 ntBASIC1.54□□□□□ -2.16
Trim54Q9ERP3 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.54□□□□□ -2.16
Trim54Q9ERP3 Gm11792-201ENSMUST00000120640 168 ntBASIC1.53□□□□□ -2.16
Trim54Q9ERP3 Gm23277-201ENSMUST00000157914 136 ntBASIC1.53□□□□□ -2.16
Trim54Q9ERP3 Mir3098-201ENSMUST00000175416 87 ntBASIC1.53□□□□□ -2.16
Trim54Q9ERP3 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC1.53□□□□□ -2.16
Trim54Q9ERP3 Gm18188-201ENSMUST00000219386 478 ntBASIC1.53□□□□□ -2.16
Trim54Q9ERP3 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.53□□□□□ -2.16
Trim54Q9ERP3 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Trim54Q9ERP3 Gm22477-201ENSMUST00000122569 316 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 253.4 ms