Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.25□□□□□ -2.37
Lima1Q9ERG0 n-R5s94-201ENSMUST00000082573 119 ntBASIC0.25□□□□□ -2.37
Lima1Q9ERG0 Gm23412-201ENSMUST00000083017 107 ntBASIC0.25□□□□□ -2.37
Lima1Q9ERG0 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Lima1Q9ERG0 Gm25496-201ENSMUST00000104430 120 ntBASIC0.24□□□□□ -2.37
Lima1Q9ERG0 Gm12837-201ENSMUST00000120131 373 ntBASIC0.24□□□□□ -2.37
Lima1Q9ERG0 Gm11835-201ENSMUST00000120635 663 ntBASIC0.24□□□□□ -2.37
Lima1Q9ERG0 Gm23982-201ENSMUST00000157141 106 ntBASIC0.24□□□□□ -2.37
Lima1Q9ERG0 Gm22983-201ENSMUST00000158308 104 ntBASIC0.24□□□□□ -2.37
Lima1Q9ERG0 Gm23853-201ENSMUST00000158375 104 ntBASIC0.24□□□□□ -2.37
Lima1Q9ERG0 Mir1933-201ENSMUST00000158930 88 ntBASIC0.24□□□□□ -2.37
Lima1Q9ERG0 Mir7079-201ENSMUST00000184697 69 ntBASIC0.24□□□□□ -2.37
Lima1Q9ERG0 Gm43563-201ENSMUST00000196761 198 ntBASIC0.24□□□□□ -2.37
Lima1Q9ERG0 AC159619.2-201ENSMUST00000222924 401 ntBASIC0.24□□□□□ -2.37
Lima1Q9ERG0 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.24□□□□□ -2.37
Lima1Q9ERG0 Gm6985-201ENSMUST00000121255 271 ntBASIC0.23□□□□□ -2.37
Lima1Q9ERG0 Gm23640-201ENSMUST00000157860 104 ntBASIC0.23□□□□□ -2.37
Lima1Q9ERG0 Gm25044-201ENSMUST00000158603 104 ntBASIC0.23□□□□□ -2.37
Lima1Q9ERG0 Gm23416-201ENSMUST00000175520 95 ntBASIC0.23□□□□□ -2.37
Lima1Q9ERG0 Gm23571-201ENSMUST00000180073 127 ntBASIC0.23□□□□□ -2.37
Lima1Q9ERG0 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.23□□□□□ -2.37
Lima1Q9ERG0 Gm45544-201ENSMUST00000211130 88 ntBASIC0.23□□□□□ -2.37
Lima1Q9ERG0 AC154296.2-201ENSMUST00000214696 545 ntBASIC0.23□□□□□ -2.37
Lima1Q9ERG0 AC153526.1-201ENSMUST00000219750 190 ntBASIC0.23□□□□□ -2.37
Lima1Q9ERG0 Snora20-201ENSMUST00000082703 128 ntBASIC0.23□□□□□ -2.37
Lima1Q9ERG0 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
Lima1Q9ERG0 Gm14671-201ENSMUST00000121790 262 ntBASIC0.22□□□□□ -2.37
Lima1Q9ERG0 Gm25318-201ENSMUST00000122554 314 ntBASIC0.22□□□□□ -2.37
Lima1Q9ERG0 Gm26415-201ENSMUST00000157673 292 ntBASIC0.22□□□□□ -2.37
Lima1Q9ERG0 Gm16307-201ENSMUST00000161269 210 ntBASIC0.22□□□□□ -2.37
Lima1Q9ERG0 Gm28849-201ENSMUST00000188127 174 ntBASIC0.22□□□□□ -2.37
Lima1Q9ERG0 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC0.22□□□□□ -2.37
Lima1Q9ERG0 Gm44959-201ENSMUST00000209127 231 ntBASIC0.22□□□□□ -2.37
Lima1Q9ERG0 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.22□□□□□ -2.37
Lima1Q9ERG0 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
Lima1Q9ERG0 Gm22469-201ENSMUST00000104118 133 ntBASIC0.21□□□□□ -2.38
Lima1Q9ERG0 Gm26090-201ENSMUST00000157897 128 ntBASIC0.21□□□□□ -2.38
Lima1Q9ERG0 Gm23763-201ENSMUST00000158345 60 ntBASIC0.21□□□□□ -2.38
Lima1Q9ERG0 Mir6350-201ENSMUST00000183639 105 ntBASIC0.21□□□□□ -2.38
Lima1Q9ERG0 Gm27717-201ENSMUST00000183933 151 ntBASIC0.21□□□□□ -2.38
Lima1Q9ERG0 Gm44055-201ENSMUST00000204376 247 ntBASIC0.21□□□□□ -2.38
Lima1Q9ERG0 Gm8219-201ENSMUST00000218309 242 ntBASIC0.21□□□□□ -2.38
Lima1Q9ERG0 Gm24204-201ENSMUST00000082950 107 ntBASIC0.21□□□□□ -2.38
Lima1Q9ERG0 Gm24453-201ENSMUST00000083346 76 ntBASIC0.21□□□□□ -2.38
Lima1Q9ERG0 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.21□□□□□ -2.38
Lima1Q9ERG0 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.2□□□□□ -2.38
Lima1Q9ERG0 Gm27997-201ENSMUST00000184942 69 ntBASIC0.2□□□□□ -2.38
Lima1Q9ERG0 Gm24316-201ENSMUST00000083041 107 ntBASIC0.2□□□□□ -2.38
Lima1Q9ERG0 Mir547-201ENSMUST00000102051 78 ntBASIC0.19□□□□□ -2.38
Lima1Q9ERG0 Gm22021-201ENSMUST00000104353 107 ntBASIC0.19□□□□□ -2.38
Lima1Q9ERG0 Gm24555-201ENSMUST00000104548 124 ntBASIC0.19□□□□□ -2.38
Lima1Q9ERG0 Gm25110-201ENSMUST00000116684 121 ntBASIC0.19□□□□□ -2.38
Lima1Q9ERG0 Gm25775-201ENSMUST00000116716 121 ntBASIC0.19□□□□□ -2.38
Lima1Q9ERG0 Gm24795-201ENSMUST00000116737 121 ntBASIC0.19□□□□□ -2.38
Lima1Q9ERG0 Gm25171-201ENSMUST00000116926 121 ntBASIC0.19□□□□□ -2.38
Lima1Q9ERG0 Gm22321-201ENSMUST00000157152 104 ntBASIC0.19□□□□□ -2.38
Lima1Q9ERG0 Gm22097-201ENSMUST00000157929 278 ntBASIC0.19□□□□□ -2.38
Lima1Q9ERG0 Gm24500-201ENSMUST00000158447 124 ntBASIC0.19□□□□□ -2.38
Lima1Q9ERG0 Gm24772-201ENSMUST00000158507 110 ntBASIC0.19□□□□□ -2.38
Lima1Q9ERG0 Gm24634-201ENSMUST00000158672 107 ntBASIC0.19□□□□□ -2.38
Lima1Q9ERG0 Gm38183-201ENSMUST00000193189 205 ntBASIC0.19□□□□□ -2.38
Lima1Q9ERG0 Gm45541-201ENSMUST00000210443 54 ntBASIC0.19□□□□□ -2.38
Lima1Q9ERG0 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.19□□□□□ -2.38
Lima1Q9ERG0 Snora19-201ENSMUST00000082962 132 ntBASIC0.19□□□□□ -2.38
Lima1Q9ERG0 Gm23658-201ENSMUST00000083233 132 ntBASIC0.19□□□□□ -2.38
Lima1Q9ERG0 Mir30a-201ENSMUST00000083471 71 ntBASIC0.19□□□□□ -2.38
Lima1Q9ERG0 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
Lima1Q9ERG0 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.18□□□□□ -2.38
Lima1Q9ERG0 Gm25787-201ENSMUST00000104709 92 ntBASIC0.18□□□□□ -2.38
Lima1Q9ERG0 Gm22586-201ENSMUST00000157507 122 ntBASIC0.18□□□□□ -2.38
Lima1Q9ERG0 Gm25882-201ENSMUST00000157784 85 ntBASIC0.18□□□□□ -2.38
Lima1Q9ERG0 Gm23783-201ENSMUST00000157941 102 ntBASIC0.18□□□□□ -2.38
Lima1Q9ERG0 Gm24501-201ENSMUST00000158452 62 ntBASIC0.18□□□□□ -2.38
Lima1Q9ERG0 Gm27475-201ENSMUST00000183420 61 ntBASIC0.18□□□□□ -2.38
Lima1Q9ERG0 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.18□□□□□ -2.38
Lima1Q9ERG0 Mir7065-201ENSMUST00000185110 61 ntBASIC0.18□□□□□ -2.38
Lima1Q9ERG0 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC0.18□□□□□ -2.38
Lima1Q9ERG0 Gm24527-201ENSMUST00000082920 107 ntBASIC0.18□□□□□ -2.38
Lima1Q9ERG0 Gm22364-201ENSMUST00000083097 98 ntBASIC0.18□□□□□ -2.38
Lima1Q9ERG0 Gm23845-201ENSMUST00000083834 152 ntBASIC0.18□□□□□ -2.38
Lima1Q9ERG0 Gm25538-201ENSMUST00000101943 107 ntBASIC0.17□□□□□ -2.38
Lima1Q9ERG0 Gm15289-201ENSMUST00000117793 244 ntBASIC0.17□□□□□ -2.38
Lima1Q9ERG0 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.17□□□□□ -2.38
Lima1Q9ERG0 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
Lima1Q9ERG0 Gm24211-201ENSMUST00000158264 107 ntBASIC0.17□□□□□ -2.38
Lima1Q9ERG0 Gm25615-201ENSMUST00000177836 94 ntBASIC0.17□□□□□ -2.38
Lima1Q9ERG0 Gm25633-201ENSMUST00000178565 107 ntBASIC0.17□□□□□ -2.38
Lima1Q9ERG0 Mir6365-201ENSMUST00000183990 101 ntBASIC0.17□□□□□ -2.38
Lima1Q9ERG0 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.17□□□□□ -2.38
Lima1Q9ERG0 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.17□□□□□ -2.38
Lima1Q9ERG0 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
Lima1Q9ERG0 Mir710-201ENSMUST00000102088 110 ntBASIC0.16□□□□□ -2.38
Lima1Q9ERG0 Gm13801-201ENSMUST00000120750 160 ntBASIC0.16□□□□□ -2.38
Lima1Q9ERG0 Gm23375-201ENSMUST00000175407 83 ntBASIC0.16□□□□□ -2.38
Lima1Q9ERG0 Mir7077-201ENSMUST00000183991 57 ntBASIC0.16□□□□□ -2.38
Lima1Q9ERG0 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC0.16□□□□□ -2.38
Lima1Q9ERG0 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.16□□□□□ -2.38
Lima1Q9ERG0 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.16□□□□□ -2.38
Lima1Q9ERG0 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.16□□□□□ -2.38
Lima1Q9ERG0 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 240.4 ms