Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm44325-201ENSMUST00000196757 77 ntBASIC2.59□□□□□ -1.99
Upf1Q9EPU0 Gm23370-201ENSMUST00000199545 130 ntBASIC2.59□□□□□ -1.99
Upf1Q9EPU0 AC164561.1-201ENSMUST00000220414 115 ntBASIC2.59□□□□□ -1.99
Upf1Q9EPU0 mt-Ta-201ENSMUST00000082398 69 ntBASIC2.59□□□□□ -1.99
Upf1Q9EPU0 Gm23138-201ENSMUST00000083365 103 ntBASIC2.59□□□□□ -1.99
Upf1Q9EPU0 Gm22866-201ENSMUST00000083947 177 ntBASIC2.59□□□□□ -1.99
Upf1Q9EPU0 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.59□□□□□ -2
Upf1Q9EPU0 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
Upf1Q9EPU0 Gm25976-201ENSMUST00000158695 130 ntBASIC2.58□□□□□ -2
Upf1Q9EPU0 Gm24461-201ENSMUST00000082735 103 ntBASIC2.58□□□□□ -2
Upf1Q9EPU0 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Upf1Q9EPU0 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.58□□□□□ -2
Upf1Q9EPU0 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Upf1Q9EPU0 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Upf1Q9EPU0 Gm14937-201ENSMUST00000119709 208 ntBASIC2.57□□□□□ -2
Upf1Q9EPU0 Gm23600-201ENSMUST00000157260 71 ntBASIC2.57□□□□□ -2
Upf1Q9EPU0 Gm25460-201ENSMUST00000157954 127 ntBASIC2.57□□□□□ -2
Upf1Q9EPU0 Gm27979-201ENSMUST00000185126 56 ntBASIC2.57□□□□□ -2
Upf1Q9EPU0 Snord43-201ENSMUST00000199549 108 ntBASIC2.57□□□□□ -2
Upf1Q9EPU0 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Upf1Q9EPU0 Gm37824-201ENSMUST00000193430 3236 ntBASIC2.57□□□□□ -2
Upf1Q9EPU0 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Upf1Q9EPU0 Gm24559-201ENSMUST00000157519 121 ntBASIC2.56□□□□□ -2
Upf1Q9EPU0 Gm16561-201ENSMUST00000163001 192 ntBASIC2.56□□□□□ -2
Upf1Q9EPU0 Mir448-201ENSMUST00000083516 112 ntBASIC2.56□□□□□ -2
Upf1Q9EPU0 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.56□□□□□ -2
Upf1Q9EPU0 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Upf1Q9EPU0 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.55□□□□□ -2
Upf1Q9EPU0 Gm24288-201ENSMUST00000157630 144 ntBASIC2.55□□□□□ -2
Upf1Q9EPU0 Gm26406-201ENSMUST00000158503 124 ntBASIC2.55□□□□□ -2
Upf1Q9EPU0 Gm24736-201ENSMUST00000158862 130 ntBASIC2.55□□□□□ -2
Upf1Q9EPU0 Gm20477-201ENSMUST00000174028 280 ntBASIC2.55□□□□□ -2
Upf1Q9EPU0 Mir6353-201ENSMUST00000183596 113 ntBASIC2.55□□□□□ -2
Upf1Q9EPU0 Gm45492-201ENSMUST00000211611 288 ntBASIC2.55□□□□□ -2
Upf1Q9EPU0 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Upf1Q9EPU0 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Upf1Q9EPU0 Gm22228-201ENSMUST00000157364 101 ntBASIC2.54□□□□□ -2
Upf1Q9EPU0 Gm22384-201ENSMUST00000158187 104 ntBASIC2.54□□□□□ -2
Upf1Q9EPU0 Gm22946-201ENSMUST00000158558 82 ntBASIC2.54□□□□□ -2
Upf1Q9EPU0 Gm22416-201ENSMUST00000158590 88 ntBASIC2.54□□□□□ -2
Upf1Q9EPU0 Gm25119-201ENSMUST00000158815 88 ntBASIC2.54□□□□□ -2
Upf1Q9EPU0 Gm23567-201ENSMUST00000178005 107 ntBASIC2.54□□□□□ -2
Upf1Q9EPU0 Gm5900-201ENSMUST00000179862 375 ntBASIC2.54□□□□□ -2
Upf1Q9EPU0 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Upf1Q9EPU0 Gm25878-201ENSMUST00000104327 93 ntBASIC2.53□□□□□ -2
Upf1Q9EPU0 Gm24605-201ENSMUST00000104772 96 ntBASIC2.53□□□□□ -2
Upf1Q9EPU0 Gm22105-201ENSMUST00000116734 116 ntBASIC2.53□□□□□ -2
Upf1Q9EPU0 Gm22486-201ENSMUST00000116815 137 ntBASIC2.53□□□□□ -2
Upf1Q9EPU0 Gm27443-201ENSMUST00000184660 98 ntBASIC2.53□□□□□ -2
Upf1Q9EPU0 Mir151-201ENSMUST00000083678 68 ntBASIC2.53□□□□□ -2
Upf1Q9EPU0 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Upf1Q9EPU0 Gm15281-201ENSMUST00000125181 351 ntBASIC2.52□□□□□ -2.01
Upf1Q9EPU0 Gm24717-201ENSMUST00000157522 124 ntBASIC2.52□□□□□ -2.01
Upf1Q9EPU0 Gm24237-201ENSMUST00000157790 132 ntBASIC2.52□□□□□ -2.01
Upf1Q9EPU0 Gm22966-201ENSMUST00000157957 129 ntBASIC2.52□□□□□ -2.01
Upf1Q9EPU0 Gm25558-201ENSMUST00000158083 106 ntBASIC2.52□□□□□ -2.01
Upf1Q9EPU0 Gm22387-201ENSMUST00000158191 131 ntBASIC2.52□□□□□ -2.01
Upf1Q9EPU0 Gm25364-201ENSMUST00000158851 107 ntBASIC2.52□□□□□ -2.01
Upf1Q9EPU0 Gm22775-201ENSMUST00000177630 120 ntBASIC2.52□□□□□ -2.01
Upf1Q9EPU0 Gm23569-201ENSMUST00000180120 120 ntBASIC2.52□□□□□ -2.01
Upf1Q9EPU0 Gm27330-201ENSMUST00000184689 132 ntBASIC2.52□□□□□ -2.01
Upf1Q9EPU0 Gm44358-201ENSMUST00000196301 98 ntBASIC2.52□□□□□ -2.01
Upf1Q9EPU0 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC2.52□□□□□ -2.01
Upf1Q9EPU0 Gm43602-201ENSMUST00000196772 300 ntBASIC2.52□□□□□ -2.01
Upf1Q9EPU0 Gm45544-201ENSMUST00000211130 88 ntBASIC2.52□□□□□ -2.01
Upf1Q9EPU0 n-R5s96-201ENSMUST00000082574 124 ntBASIC2.52□□□□□ -2.01
Upf1Q9EPU0 Gm25797-201ENSMUST00000082640 107 ntBASIC2.52□□□□□ -2.01
Upf1Q9EPU0 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.52□□□□□ -2.01
Upf1Q9EPU0 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Upf1Q9EPU0 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Upf1Q9EPU0 Gm12432-201ENSMUST00000119540 186 ntBASIC2.51□□□□□ -2.01
Upf1Q9EPU0 Gm23656-201ENSMUST00000122626 112 ntBASIC2.51□□□□□ -2.01
Upf1Q9EPU0 Gm23260-201ENSMUST00000158317 172 ntBASIC2.51□□□□□ -2.01
Upf1Q9EPU0 Mir6394-201ENSMUST00000184738 99 ntBASIC2.51□□□□□ -2.01
Upf1Q9EPU0 Mir6901-201ENSMUST00000185062 62 ntBASIC2.51□□□□□ -2.01
Upf1Q9EPU0 Gm25588-201ENSMUST00000082501 140 ntBASIC2.51□□□□□ -2.01
Upf1Q9EPU0 Gm25409-201ENSMUST00000083764 131 ntBASIC2.51□□□□□ -2.01
Upf1Q9EPU0 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Upf1Q9EPU0 Gm26074-201ENSMUST00000104063 129 ntBASIC2.5□□□□□ -2.01
Upf1Q9EPU0 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.5□□□□□ -2.01
Upf1Q9EPU0 Gm23504-201ENSMUST00000158988 95 ntBASIC2.5□□□□□ -2.01
Upf1Q9EPU0 Mir7679-201ENSMUST00000183379 63 ntBASIC2.5□□□□□ -2.01
Upf1Q9EPU0 Gm25812-201ENSMUST00000082751 103 ntBASIC2.5□□□□□ -2.01
Upf1Q9EPU0 Gm25697-201ENSMUST00000082902 98 ntBASIC2.5□□□□□ -2.01
Upf1Q9EPU0 Gm22743-201ENSMUST00000083445 133 ntBASIC2.5□□□□□ -2.01
Upf1Q9EPU0 Gm22681-201ENSMUST00000083853 106 ntBASIC2.5□□□□□ -2.01
Upf1Q9EPU0 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.49□□□□□ -2.01
Upf1Q9EPU0 Mir1949-201ENSMUST00000157434 141 ntBASIC2.49□□□□□ -2.01
Upf1Q9EPU0 Gm26415-201ENSMUST00000157673 292 ntBASIC2.49□□□□□ -2.01
Upf1Q9EPU0 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2.49□□□□□ -2.01
Upf1Q9EPU0 Mir107-201ENSMUST00000083660 87 ntBASIC2.49□□□□□ -2.01
Upf1Q9EPU0 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Upf1Q9EPU0 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Upf1Q9EPU0 Gm24586-201ENSMUST00000116695 89 ntBASIC2.48□□□□□ -2.01
Upf1Q9EPU0 Gm22790-201ENSMUST00000157229 129 ntBASIC2.48□□□□□ -2.01
Upf1Q9EPU0 Gm23599-201ENSMUST00000157261 251 ntBASIC2.48□□□□□ -2.01
Upf1Q9EPU0 Gm22163-201ENSMUST00000158408 135 ntBASIC2.48□□□□□ -2.01
Upf1Q9EPU0 Mir7683-201ENSMUST00000183842 61 ntBASIC2.48□□□□□ -2.01
Upf1Q9EPU0 Mir6240-201ENSMUST00000184281 117 ntBASIC2.48□□□□□ -2.01
Upf1Q9EPU0 Gm18665-201ENSMUST00000189783 270 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 171.9 ms