Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Ccdc39Q9D5Y1 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.38□□□□□ -2.19
Ccdc39Q9D5Y1 Gm23760-201ENSMUST00000158350 116 ntBASIC1.38□□□□□ -2.19
Ccdc39Q9D5Y1 Gm22767-201ENSMUST00000158365 165 ntBASIC1.38□□□□□ -2.19
Ccdc39Q9D5Y1 Gm23209-201ENSMUST00000158667 110 ntBASIC1.38□□□□□ -2.19
Ccdc39Q9D5Y1 Gm23339-201ENSMUST00000158962 139 ntBASIC1.38□□□□□ -2.19
Ccdc39Q9D5Y1 Gm25935-201ENSMUST00000178746 107 ntBASIC1.38□□□□□ -2.19
Ccdc39Q9D5Y1 Gm25142-201ENSMUST00000082698 107 ntBASIC1.38□□□□□ -2.19
Ccdc39Q9D5Y1 Snord82-201ENSMUST00000082889 70 ntBASIC1.38□□□□□ -2.19
Ccdc39Q9D5Y1 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Ccdc39Q9D5Y1 Gm24132-201ENSMUST00000104745 91 ntBASIC1.37□□□□□ -2.19
Ccdc39Q9D5Y1 Gm25494-201ENSMUST00000158143 100 ntBASIC1.37□□□□□ -2.19
Ccdc39Q9D5Y1 Mir7052-201ENSMUST00000184821 65 ntBASIC1.37□□□□□ -2.19
Ccdc39Q9D5Y1 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Ccdc39Q9D5Y1 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.37□□□□□ -2.19
Ccdc39Q9D5Y1 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.37□□□□□ -2.19
Ccdc39Q9D5Y1 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.37□□□□□ -2.19
Ccdc39Q9D5Y1 Gm24624-201ENSMUST00000082617 164 ntBASIC1.37□□□□□ -2.19
Ccdc39Q9D5Y1 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.36□□□□□ -2.19
Ccdc39Q9D5Y1 Gm26293-201ENSMUST00000104170 84 ntBASIC1.36□□□□□ -2.19
Ccdc39Q9D5Y1 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.36□□□□□ -2.19
Ccdc39Q9D5Y1 Gm25825-201ENSMUST00000157091 124 ntBASIC1.36□□□□□ -2.19
Ccdc39Q9D5Y1 Gm22279-201ENSMUST00000157200 93 ntBASIC1.36□□□□□ -2.19
Ccdc39Q9D5Y1 Gm22586-201ENSMUST00000157507 122 ntBASIC1.36□□□□□ -2.19
Ccdc39Q9D5Y1 Gm23665-201ENSMUST00000158054 62 ntBASIC1.36□□□□□ -2.19
Ccdc39Q9D5Y1 Mir7675-201ENSMUST00000184262 58 ntBASIC1.36□□□□□ -2.19
Ccdc39Q9D5Y1 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Ccdc39Q9D5Y1 Gm38183-201ENSMUST00000193189 205 ntBASIC1.36□□□□□ -2.19
Ccdc39Q9D5Y1 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.36□□□□□ -2.19
Ccdc39Q9D5Y1 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.36□□□□□ -2.19
Ccdc39Q9D5Y1 Gm22980-201ENSMUST00000082608 70 ntBASIC1.36□□□□□ -2.19
Ccdc39Q9D5Y1 Snord47-201ENSMUST00000083034 77 ntBASIC1.36□□□□□ -2.19
Ccdc39Q9D5Y1 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.36□□□□□ -2.19
Ccdc39Q9D5Y1 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.35□□□□□ -2.19
Ccdc39Q9D5Y1 Gm12449-201ENSMUST00000117572 234 ntBASIC1.35□□□□□ -2.19
Ccdc39Q9D5Y1 Gm14536-201ENSMUST00000118324 138 ntBASIC1.35□□□□□ -2.19
Ccdc39Q9D5Y1 Gm15027-201ENSMUST00000120922 138 ntBASIC1.35□□□□□ -2.19
Ccdc39Q9D5Y1 Gm23329-201ENSMUST00000157415 108 ntBASIC1.35□□□□□ -2.19
Ccdc39Q9D5Y1 Gm24015-201ENSMUST00000157725 232 ntBASIC1.35□□□□□ -2.19
Ccdc39Q9D5Y1 Gm22485-201ENSMUST00000157990 109 ntBASIC1.35□□□□□ -2.19
Ccdc39Q9D5Y1 Gm37624-201ENSMUST00000193751 219 ntBASIC1.35□□□□□ -2.19
Ccdc39Q9D5Y1 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.35□□□□□ -2.19
Ccdc39Q9D5Y1 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Ccdc39Q9D5Y1 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.35□□□□□ -2.19
Ccdc39Q9D5Y1 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Ccdc39Q9D5Y1 Gm25768-201ENSMUST00000158570 98 ntBASIC1.34□□□□□ -2.19
Ccdc39Q9D5Y1 Gm23194-201ENSMUST00000158813 105 ntBASIC1.34□□□□□ -2.19
Ccdc39Q9D5Y1 Gm36189-201ENSMUST00000204113 523 ntBASIC1.34□□□□□ -2.19
Ccdc39Q9D5Y1 Gm25895-201ENSMUST00000083714 100 ntBASIC1.34□□□□□ -2.19
Ccdc39Q9D5Y1 Mir471-201ENSMUST00000093596 67 ntBASIC1.34□□□□□ -2.19
Ccdc39Q9D5Y1 Gm25538-201ENSMUST00000101943 107 ntBASIC1.33□□□□□ -2.2
Ccdc39Q9D5Y1 Gm24915-201ENSMUST00000157288 78 ntBASIC1.33□□□□□ -2.2
Ccdc39Q9D5Y1 Gm25884-201ENSMUST00000157782 62 ntBASIC1.33□□□□□ -2.2
Ccdc39Q9D5Y1 Gm24750-201ENSMUST00000157843 104 ntBASIC1.33□□□□□ -2.2
Ccdc39Q9D5Y1 Mir6240-201ENSMUST00000184281 117 ntBASIC1.33□□□□□ -2.2
Ccdc39Q9D5Y1 Mir6481-201ENSMUST00000184617 110 ntBASIC1.33□□□□□ -2.2
Ccdc39Q9D5Y1 Gm44308-201ENSMUST00000197080 99 ntBASIC1.33□□□□□ -2.2
Ccdc39Q9D5Y1 BC022960-201ENSMUST00000119987 1815 ntBASIC1.32□□□□□ -2.2
Ccdc39Q9D5Y1 Gm24683-201ENSMUST00000104840 88 ntBASIC1.32□□□□□ -2.2
Ccdc39Q9D5Y1 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Ccdc39Q9D5Y1 Gm23655-201ENSMUST00000122627 105 ntBASIC1.32□□□□□ -2.2
Ccdc39Q9D5Y1 Mir1904-201ENSMUST00000122702 80 ntBASIC1.32□□□□□ -2.2
Ccdc39Q9D5Y1 Gm22337-201ENSMUST00000157721 132 ntBASIC1.32□□□□□ -2.2
Ccdc39Q9D5Y1 Gm26363-201ENSMUST00000158866 83 ntBASIC1.32□□□□□ -2.2
Ccdc39Q9D5Y1 Mir669k-201ENSMUST00000177742 127 ntBASIC1.32□□□□□ -2.2
Ccdc39Q9D5Y1 Gm25673-201ENSMUST00000179957 127 ntBASIC1.32□□□□□ -2.2
Ccdc39Q9D5Y1 Gm27285-201ENSMUST00000183875 127 ntBASIC1.32□□□□□ -2.2
Ccdc39Q9D5Y1 Gm27465-201ENSMUST00000184290 91 ntBASIC1.32□□□□□ -2.2
Ccdc39Q9D5Y1 Gm28409-201ENSMUST00000187064 103 ntBASIC1.32□□□□□ -2.2
Ccdc39Q9D5Y1 Gm44326-201ENSMUST00000198226 101 ntBASIC1.32□□□□□ -2.2
Ccdc39Q9D5Y1 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.32□□□□□ -2.2
Ccdc39Q9D5Y1 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Ccdc39Q9D5Y1 Gm22973-201ENSMUST00000083298 191 ntBASIC1.32□□□□□ -2.2
Ccdc39Q9D5Y1 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.31□□□□□ -2.2
Ccdc39Q9D5Y1 Gm24375-201ENSMUST00000104397 132 ntBASIC1.31□□□□□ -2.2
Ccdc39Q9D5Y1 Snord89-201ENSMUST00000104516 110 ntBASIC1.31□□□□□ -2.2
Ccdc39Q9D5Y1 Gm22051-201ENSMUST00000117002 127 ntBASIC1.31□□□□□ -2.2
Ccdc39Q9D5Y1 Gm12432-201ENSMUST00000119540 186 ntBASIC1.31□□□□□ -2.2
Ccdc39Q9D5Y1 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.31□□□□□ -2.2
Ccdc39Q9D5Y1 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.31□□□□□ -2.2
Ccdc39Q9D5Y1 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.31□□□□□ -2.2
Ccdc39Q9D5Y1 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.31□□□□□ -2.2
Ccdc39Q9D5Y1 Gm23328-201ENSMUST00000157418 132 ntBASIC1.31□□□□□ -2.2
Ccdc39Q9D5Y1 Gm25223-201ENSMUST00000158200 110 ntBASIC1.31□□□□□ -2.2
Ccdc39Q9D5Y1 Gm24634-201ENSMUST00000158672 107 ntBASIC1.31□□□□□ -2.2
Ccdc39Q9D5Y1 Mir6350-201ENSMUST00000183639 105 ntBASIC1.31□□□□□ -2.2
Ccdc39Q9D5Y1 Mir7091-201ENSMUST00000184075 79 ntBASIC1.31□□□□□ -2.2
Ccdc39Q9D5Y1 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Ccdc39Q9D5Y1 Gm44052-201ENSMUST00000203382 396 ntBASIC1.31□□□□□ -2.2
Ccdc39Q9D5Y1 Gm19855-201ENSMUST00000210145 249 ntBASIC1.31□□□□□ -2.2
Ccdc39Q9D5Y1 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Ccdc39Q9D5Y1 Mir544-201ENSMUST00000103813 78 ntBASIC1.3□□□□□ -2.2
Ccdc39Q9D5Y1 Gm22074-201ENSMUST00000158595 113 ntBASIC1.3□□□□□ -2.2
Ccdc39Q9D5Y1 Gm25069-201ENSMUST00000175238 86 ntBASIC1.3□□□□□ -2.2
Ccdc39Q9D5Y1 Gm44325-201ENSMUST00000196757 77 ntBASIC1.3□□□□□ -2.2
Ccdc39Q9D5Y1 Gm18188-201ENSMUST00000219386 478 ntBASIC1.3□□□□□ -2.2
Ccdc39Q9D5Y1 Gm25038-201ENSMUST00000082928 130 ntBASIC1.3□□□□□ -2.2
Ccdc39Q9D5Y1 Gm24929-201ENSMUST00000083403 139 ntBASIC1.3□□□□□ -2.2
Ccdc39Q9D5Y1 Mir196b-201ENSMUST00000083509 85 ntBASIC1.3□□□□□ -2.2
Ccdc39Q9D5Y1 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms