Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.8□□□□□ -1.96
Trim42Q9D2H5 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.8□□□□□ -1.96
Trim42Q9D2H5 Gm25485-201ENSMUST00000104120 132 ntBASIC2.8□□□□□ -1.96
Trim42Q9D2H5 Gm23033-201ENSMUST00000157996 134 ntBASIC2.8□□□□□ -1.96
Trim42Q9D2H5 Gm24801-201ENSMUST00000178503 105 ntBASIC2.8□□□□□ -1.96
Trim42Q9D2H5 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.8□□□□□ -1.96
Trim42Q9D2H5 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.8□□□□□ -1.96
Trim42Q9D2H5 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trim42Q9D2H5 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.8□□□□□ -1.96
Trim42Q9D2H5 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.79□□□□□ -1.96
Trim42Q9D2H5 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
Trim42Q9D2H5 Mir499-201ENSMUST00000102357 79 ntBASIC2.79□□□□□ -1.96
Trim42Q9D2H5 Gm24403-201ENSMUST00000104616 130 ntBASIC2.79□□□□□ -1.96
Trim42Q9D2H5 Gm12309-201ENSMUST00000119889 182 ntBASIC2.79□□□□□ -1.96
Trim42Q9D2H5 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC2.79□□□□□ -1.96
Trim42Q9D2H5 Gm23168-201ENSMUST00000157156 143 ntBASIC2.79□□□□□ -1.96
Trim42Q9D2H5 Gm25748-201ENSMUST00000175487 70 ntBASIC2.79□□□□□ -1.96
Trim42Q9D2H5 Gm37085-201ENSMUST00000193780 196 ntBASIC2.79□□□□□ -1.96
Trim42Q9D2H5 Igkv11-118-201ENSMUST00000199448 346 ntBASIC2.79□□□□□ -1.96
Trim42Q9D2H5 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC2.79□□□□□ -1.96
Trim42Q9D2H5 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
Trim42Q9D2H5 Gm24536-201ENSMUST00000083144 107 ntBASIC2.79□□□□□ -1.96
Trim42Q9D2H5 Mir34a-201ENSMUST00000083559 102 ntBASIC2.79□□□□□ -1.96
Trim42Q9D2H5 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.79□□□□□ -1.96
Trim42Q9D2H5 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Trim42Q9D2H5 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Trim42Q9D2H5 Mir673-201ENSMUST00000102361 91 ntBASIC2.78□□□□□ -1.96
Trim42Q9D2H5 Gm24118-201ENSMUST00000103972 126 ntBASIC2.78□□□□□ -1.96
Trim42Q9D2H5 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.78□□□□□ -1.96
Trim42Q9D2H5 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.78□□□□□ -1.96
Trim42Q9D2H5 Gm23468-201ENSMUST00000157125 108 ntBASIC2.78□□□□□ -1.96
Trim42Q9D2H5 Gm23865-201ENSMUST00000157723 97 ntBASIC2.78□□□□□ -1.96
Trim42Q9D2H5 Gm24238-201ENSMUST00000157792 98 ntBASIC2.78□□□□□ -1.96
Trim42Q9D2H5 Gm25711-201ENSMUST00000158633 128 ntBASIC2.78□□□□□ -1.96
Trim42Q9D2H5 Gm42807-201ENSMUST00000200141 329 ntBASIC2.78□□□□□ -1.96
Trim42Q9D2H5 Gm45544-201ENSMUST00000211130 88 ntBASIC2.78□□□□□ -1.96
Trim42Q9D2H5 Gm19118-201ENSMUST00000222554 98 ntBASIC2.78□□□□□ -1.96
Trim42Q9D2H5 Mir411-201ENSMUST00000083543 82 ntBASIC2.78□□□□□ -1.96
Trim42Q9D2H5 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Trim42Q9D2H5 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Trim42Q9D2H5 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Trim42Q9D2H5 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Trim42Q9D2H5 Gm23351-201ENSMUST00000158427 125 ntBASIC2.77□□□□□ -1.97
Trim42Q9D2H5 Rnu7-201ENSMUST00000158458 62 ntBASIC2.77□□□□□ -1.97
Trim42Q9D2H5 Gm23090-201ENSMUST00000177331 78 ntBASIC2.77□□□□□ -1.97
Trim42Q9D2H5 Gm27379-201ENSMUST00000183730 123 ntBASIC2.77□□□□□ -1.97
Trim42Q9D2H5 Gm44555-201ENSMUST00000209008 148 ntBASIC2.77□□□□□ -1.97
Trim42Q9D2H5 Gm26441-201ENSMUST00000082590 104 ntBASIC2.77□□□□□ -1.97
Trim42Q9D2H5 Snora33-201ENSMUST00000093556 129 ntBASIC2.77□□□□□ -1.97
Trim42Q9D2H5 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Trim42Q9D2H5 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.76□□□□□ -1.97
Trim42Q9D2H5 n-R5s39-201ENSMUST00000122613 108 ntBASIC2.76□□□□□ -1.97
Trim42Q9D2H5 Gm24730-201ENSMUST00000158228 117 ntBASIC2.76□□□□□ -1.97
Trim42Q9D2H5 Gm43932-201ENSMUST00000204499 52 ntBASIC2.76□□□□□ -1.97
Trim42Q9D2H5 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.76□□□□□ -1.97
Trim42Q9D2H5 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Trim42Q9D2H5 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.76□□□□□ -1.97
Trim42Q9D2H5 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.75□□□□□ -1.97
Trim42Q9D2H5 Gm23826-201ENSMUST00000157394 119 ntBASIC2.75□□□□□ -1.97
Trim42Q9D2H5 Gm22535-201ENSMUST00000158174 119 ntBASIC2.75□□□□□ -1.97
Trim42Q9D2H5 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.75□□□□□ -1.97
Trim42Q9D2H5 Snord93-201ENSMUST00000175580 71 ntBASIC2.75□□□□□ -1.97
Trim42Q9D2H5 Gm24674-201ENSMUST00000179194 104 ntBASIC2.75□□□□□ -1.97
Trim42Q9D2H5 Gm45268-201ENSMUST00000210046 370 ntBASIC2.75□□□□□ -1.97
Trim42Q9D2H5 Gm45386-201ENSMUST00000210194 218 ntBASIC2.75□□□□□ -1.97
Trim42Q9D2H5 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Trim42Q9D2H5 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trim42Q9D2H5 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trim42Q9D2H5 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
Trim42Q9D2H5 Mir293-201ENSMUST00000104841 80 ntBASIC2.74□□□□□ -1.97
Trim42Q9D2H5 Gm22151-201ENSMUST00000116963 58 ntBASIC2.74□□□□□ -1.97
Trim42Q9D2H5 Gm23715-201ENSMUST00000157354 106 ntBASIC2.74□□□□□ -1.97
Trim42Q9D2H5 Mir29c-201ENSMUST00000083614 88 ntBASIC2.74□□□□□ -1.97
Trim42Q9D2H5 Snord80-201ENSMUST00000083801 81 ntBASIC2.74□□□□□ -1.97
Trim42Q9D2H5 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.74□□□□□ -1.97
Trim42Q9D2H5 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.74□□□□□ -1.97
Trim42Q9D2H5 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Trim42Q9D2H5 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Trim42Q9D2H5 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Trim42Q9D2H5 Gm24345-201ENSMUST00000158706 124 ntBASIC2.73□□□□□ -1.97
Trim42Q9D2H5 Gm23917-201ENSMUST00000175256 98 ntBASIC2.73□□□□□ -1.97
Trim42Q9D2H5 Gm25354-201ENSMUST00000179110 105 ntBASIC2.73□□□□□ -1.97
Trim42Q9D2H5 Mir7047-201ENSMUST00000184595 64 ntBASIC2.73□□□□□ -1.97
Trim42Q9D2H5 Gm27991-201ENSMUST00000184804 137 ntBASIC2.73□□□□□ -1.97
Trim42Q9D2H5 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Trim42Q9D2H5 Mir7215-201ENSMUST00000200383 51 ntBASIC2.73□□□□□ -1.97
Trim42Q9D2H5 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC2.73□□□□□ -1.97
Trim42Q9D2H5 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.73□□□□□ -1.97
Trim42Q9D2H5 Gm26458-201ENSMUST00000082832 128 ntBASIC2.73□□□□□ -1.97
Trim42Q9D2H5 Snord118-201ENSMUST00000082965 135 ntBASIC2.73□□□□□ -1.97
Trim42Q9D2H5 Gm23249-201ENSMUST00000083369 161 ntBASIC2.73□□□□□ -1.97
Trim42Q9D2H5 Mir423-201ENSMUST00000083584 109 ntBASIC2.73□□□□□ -1.97
Trim42Q9D2H5 Gm25337-201ENSMUST00000083723 104 ntBASIC2.73□□□□□ -1.97
Trim42Q9D2H5 AF357428-201ENSMUST00000083815 69 ntBASIC2.73□□□□□ -1.97
Trim42Q9D2H5 Gm24127-201ENSMUST00000104110 130 ntBASIC2.72□□□□□ -1.97
Trim42Q9D2H5 Gm23011-201ENSMUST00000104148 132 ntBASIC2.72□□□□□ -1.97
Trim42Q9D2H5 Gm25061-201ENSMUST00000104665 107 ntBASIC2.72□□□□□ -1.97
Trim42Q9D2H5 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Trim42Q9D2H5 Gm13433-201ENSMUST00000121701 240 ntBASIC2.72□□□□□ -1.97
Trim42Q9D2H5 Gm23983-201ENSMUST00000157142 114 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 157.1 ms