Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Mir1904-201ENSMUST00000122702 80 ntBASIC1.17□□□□□ -2.22
Vps28Q9D1C8 Gm24634-201ENSMUST00000158672 107 ntBASIC1.17□□□□□ -2.22
Vps28Q9D1C8 Gm24345-201ENSMUST00000158706 124 ntBASIC1.17□□□□□ -2.22
Vps28Q9D1C8 Gm25838-201ENSMUST00000158920 120 ntBASIC1.17□□□□□ -2.22
Vps28Q9D1C8 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Vps28Q9D1C8 Gm37889-201ENSMUST00000194174 251 ntBASIC1.17□□□□□ -2.22
Vps28Q9D1C8 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.17□□□□□ -2.22
Vps28Q9D1C8 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Vps28Q9D1C8 Gm26082-201ENSMUST00000104070 127 ntBASIC1.16□□□□□ -2.22
Vps28Q9D1C8 Gm11936-201ENSMUST00000118323 160 ntBASIC1.16□□□□□ -2.22
Vps28Q9D1C8 Gm14671-201ENSMUST00000121790 262 ntBASIC1.16□□□□□ -2.22
Vps28Q9D1C8 Gm22163-201ENSMUST00000158408 135 ntBASIC1.16□□□□□ -2.22
Vps28Q9D1C8 Gm26073-201ENSMUST00000179906 127 ntBASIC1.16□□□□□ -2.22
Vps28Q9D1C8 Gm44396-201ENSMUST00000199843 114 ntBASIC1.16□□□□□ -2.22
Vps28Q9D1C8 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.16□□□□□ -2.22
Vps28Q9D1C8 Gm45859-201ENSMUST00000212794 214 ntBASIC1.16□□□□□ -2.22
Vps28Q9D1C8 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Vps28Q9D1C8 Gm24171-201ENSMUST00000104126 131 ntBASIC1.15□□□□□ -2.23
Vps28Q9D1C8 Gm25878-201ENSMUST00000104327 93 ntBASIC1.15□□□□□ -2.23
Vps28Q9D1C8 Gm26026-201ENSMUST00000122726 123 ntBASIC1.15□□□□□ -2.23
Vps28Q9D1C8 Gm23329-201ENSMUST00000157415 108 ntBASIC1.15□□□□□ -2.23
Vps28Q9D1C8 Gm25720-201ENSMUST00000157503 105 ntBASIC1.15□□□□□ -2.23
Vps28Q9D1C8 Gm25011-201ENSMUST00000158398 126 ntBASIC1.15□□□□□ -2.23
Vps28Q9D1C8 Gm22200-201ENSMUST00000158614 67 ntBASIC1.15□□□□□ -2.23
Vps28Q9D1C8 Gm22914-201ENSMUST00000175195 77 ntBASIC1.15□□□□□ -2.23
Vps28Q9D1C8 Gm27365-201ENSMUST00000184041 177 ntBASIC1.15□□□□□ -2.23
Vps28Q9D1C8 Mir7059-201ENSMUST00000184825 59 ntBASIC1.15□□□□□ -2.23
Vps28Q9D1C8 Gm25141-201ENSMUST00000083177 107 ntBASIC1.15□□□□□ -2.23
Vps28Q9D1C8 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Vps28Q9D1C8 Gm23841-201ENSMUST00000116951 114 ntBASIC1.14□□□□□ -2.23
Vps28Q9D1C8 Gm15069-201ENSMUST00000117792 192 ntBASIC1.14□□□□□ -2.23
Vps28Q9D1C8 Gm15068-201ENSMUST00000119796 192 ntBASIC1.14□□□□□ -2.23
Vps28Q9D1C8 Gm13246-201ENSMUST00000120994 315 ntBASIC1.14□□□□□ -2.23
Vps28Q9D1C8 Gm23584-201ENSMUST00000157655 129 ntBASIC1.14□□□□□ -2.23
Vps28Q9D1C8 Gm26415-201ENSMUST00000157673 292 ntBASIC1.14□□□□□ -2.23
Vps28Q9D1C8 Gm25718-201ENSMUST00000158632 118 ntBASIC1.14□□□□□ -2.23
Vps28Q9D1C8 Gm25069-201ENSMUST00000175238 86 ntBASIC1.14□□□□□ -2.23
Vps28Q9D1C8 Gm27585-201ENSMUST00000183717 199 ntBASIC1.14□□□□□ -2.23
Vps28Q9D1C8 Gm27894-201ENSMUST00000184177 92 ntBASIC1.14□□□□□ -2.23
Vps28Q9D1C8 AL606472.1-201ENSMUST00000224628 275 ntBASIC1.14□□□□□ -2.23
Vps28Q9D1C8 Gm22283-201ENSMUST00000082556 161 ntBASIC1.14□□□□□ -2.23
Vps28Q9D1C8 Gm22686-201ENSMUST00000082847 100 ntBASIC1.14□□□□□ -2.23
Vps28Q9D1C8 Gm23970-201ENSMUST00000083319 107 ntBASIC1.14□□□□□ -2.23
Vps28Q9D1C8 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.14□□□□□ -2.23
Vps28Q9D1C8 Mir541-201ENSMUST00000102097 90 ntBASIC1.13□□□□□ -2.23
Vps28Q9D1C8 Gm24271-201ENSMUST00000102327 111 ntBASIC1.13□□□□□ -2.23
Vps28Q9D1C8 Gm12815-201ENSMUST00000121737 135 ntBASIC1.13□□□□□ -2.23
Vps28Q9D1C8 Gm26089-201ENSMUST00000157898 107 ntBASIC1.13□□□□□ -2.23
Vps28Q9D1C8 Gm25768-201ENSMUST00000158570 98 ntBASIC1.13□□□□□ -2.23
Vps28Q9D1C8 Mir7091-201ENSMUST00000184075 79 ntBASIC1.13□□□□□ -2.23
Vps28Q9D1C8 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.13□□□□□ -2.23
Vps28Q9D1C8 Gm22387-201ENSMUST00000158191 131 ntBASIC1.12□□□□□ -2.23
Vps28Q9D1C8 Gm22515-201ENSMUST00000158273 305 ntBASIC1.12□□□□□ -2.23
Vps28Q9D1C8 Gm28020-201ENSMUST00000157739 67 ntBASIC1.11□□□□□ -2.23
Vps28Q9D1C8 Gm24880-201ENSMUST00000158776 85 ntBASIC1.11□□□□□ -2.23
Vps28Q9D1C8 Mir6381-201ENSMUST00000183426 87 ntBASIC1.11□□□□□ -2.23
Vps28Q9D1C8 Mir6240-201ENSMUST00000184281 117 ntBASIC1.11□□□□□ -2.23
Vps28Q9D1C8 Mir384-201ENSMUST00000083565 88 ntBASIC1.11□□□□□ -2.23
Vps28Q9D1C8 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.1□□□□□ -2.23
Vps28Q9D1C8 Gm12686-201ENSMUST00000120546 397 ntBASIC1.1□□□□□ -2.23
Vps28Q9D1C8 Gm23760-201ENSMUST00000158350 116 ntBASIC1.1□□□□□ -2.23
Vps28Q9D1C8 Mir3968-201ENSMUST00000175355 100 ntBASIC1.1□□□□□ -2.23
Vps28Q9D1C8 Gm20630-201ENSMUST00000177387 551 ntBASIC1.1□□□□□ -2.23
Vps28Q9D1C8 Gm27419-201ENSMUST00000184576 109 ntBASIC1.1□□□□□ -2.23
Vps28Q9D1C8 Gm28256-201ENSMUST00000188953 139 ntBASIC1.1□□□□□ -2.23
Vps28Q9D1C8 Gm28559-201ENSMUST00000190532 139 ntBASIC1.1□□□□□ -2.23
Vps28Q9D1C8 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.1□□□□□ -2.23
Vps28Q9D1C8 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Vps28Q9D1C8 Gm6897-201ENSMUST00000117714 138 ntBASIC1.09□□□□□ -2.23
Vps28Q9D1C8 Gm14758-201ENSMUST00000119104 138 ntBASIC1.09□□□□□ -2.23
Vps28Q9D1C8 Gm25323-201ENSMUST00000122555 103 ntBASIC1.09□□□□□ -2.23
Vps28Q9D1C8 Gm23328-201ENSMUST00000157418 132 ntBASIC1.09□□□□□ -2.23
Vps28Q9D1C8 Gm22767-201ENSMUST00000158365 165 ntBASIC1.09□□□□□ -2.23
Vps28Q9D1C8 Snora24-201ENSMUST00000174989 130 ntBASIC1.09□□□□□ -2.23
Vps28Q9D1C8 Snora15-201ENSMUST00000177461 131 ntBASIC1.09□□□□□ -2.23
Vps28Q9D1C8 Gm28344-201ENSMUST00000185704 279 ntBASIC1.09□□□□□ -2.23
Vps28Q9D1C8 Gm42988-201ENSMUST00000198116 225 ntBASIC1.09□□□□□ -2.23
Vps28Q9D1C8 Mir410-201ENSMUST00000083563 81 ntBASIC1.09□□□□□ -2.23
Vps28Q9D1C8 Mir146-201ENSMUST00000083667 65 ntBASIC1.09□□□□□ -2.23
Vps28Q9D1C8 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
Vps28Q9D1C8 Gm23892-201ENSMUST00000158105 130 ntBASIC1.08□□□□□ -2.24
Vps28Q9D1C8 Gm25267-201ENSMUST00000158522 63 ntBASIC1.08□□□□□ -2.24
Vps28Q9D1C8 Gm23047-201ENSMUST00000177661 94 ntBASIC1.08□□□□□ -2.24
Vps28Q9D1C8 Mir7052-201ENSMUST00000184821 65 ntBASIC1.08□□□□□ -2.24
Vps28Q9D1C8 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Vps28Q9D1C8 Gm43898-201ENSMUST00000204456 424 ntBASIC1.08□□□□□ -2.24
Vps28Q9D1C8 Gm44976-201ENSMUST00000205543 261 ntBASIC1.08□□□□□ -2.24
Vps28Q9D1C8 Gm45268-201ENSMUST00000210046 370 ntBASIC1.08□□□□□ -2.24
Vps28Q9D1C8 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.08□□□□□ -2.24
Vps28Q9D1C8 Gm24624-201ENSMUST00000082617 164 ntBASIC1.08□□□□□ -2.24
Vps28Q9D1C8 Snora20-201ENSMUST00000082703 128 ntBASIC1.08□□□□□ -2.24
Vps28Q9D1C8 Mir451a-201ENSMUST00000093557 72 ntBASIC1.08□□□□□ -2.24
Vps28Q9D1C8 Gm24121-201ENSMUST00000102029 106 ntBASIC1.07□□□□□ -2.24
Vps28Q9D1C8 Gm24942-201ENSMUST00000158328 114 ntBASIC1.07□□□□□ -2.24
Vps28Q9D1C8 Gm16539-201ENSMUST00000160086 327 ntBASIC1.07□□□□□ -2.24
Vps28Q9D1C8 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC1.07□□□□□ -2.24
Vps28Q9D1C8 Gm22951-201ENSMUST00000179471 107 ntBASIC1.07□□□□□ -2.24
Vps28Q9D1C8 Gm44989-201ENSMUST00000204749 217 ntBASIC1.07□□□□□ -2.24
Vps28Q9D1C8 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Vps28Q9D1C8 Gm24311-201ENSMUST00000082570 104 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms