Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm22283-201ENSMUST00000082556 161 ntBASIC1.75□□□□□ -2.13
Ddx56Q9D0R4 Gm23461-201ENSMUST00000083265 107 ntBASIC1.75□□□□□ -2.13
Ddx56Q9D0R4 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Ddx56Q9D0R4 Snord100-201ENSMUST00000116836 74 ntBASIC1.74□□□□□ -2.13
Ddx56Q9D0R4 Gm24559-201ENSMUST00000157519 121 ntBASIC1.74□□□□□ -2.13
Ddx56Q9D0R4 Gm23106-201ENSMUST00000157554 101 ntBASIC1.74□□□□□ -2.13
Ddx56Q9D0R4 Gm22603-201ENSMUST00000157603 96 ntBASIC1.74□□□□□ -2.13
Ddx56Q9D0R4 Gm26415-201ENSMUST00000157673 292 ntBASIC1.74□□□□□ -2.13
Ddx56Q9D0R4 Gm25663-201ENSMUST00000157698 135 ntBASIC1.74□□□□□ -2.13
Ddx56Q9D0R4 Gm22664-201ENSMUST00000158719 105 ntBASIC1.74□□□□□ -2.13
Ddx56Q9D0R4 Gm22665-201ENSMUST00000158720 275 ntBASIC1.74□□□□□ -2.13
Ddx56Q9D0R4 Gm28862-201ENSMUST00000188246 163 ntBASIC1.74□□□□□ -2.13
Ddx56Q9D0R4 Gm25820-202ENSMUST00000197479 128 ntBASIC1.74□□□□□ -2.13
Ddx56Q9D0R4 Gm44853-201ENSMUST00000209070 250 ntBASIC1.74□□□□□ -2.13
Ddx56Q9D0R4 Mir186-201ENSMUST00000083497 71 ntBASIC1.74□□□□□ -2.13
Ddx56Q9D0R4 Gm25949-201ENSMUST00000175333 114 ntBASIC1.73□□□□□ -2.13
Ddx56Q9D0R4 Gm27285-201ENSMUST00000183875 127 ntBASIC1.73□□□□□ -2.13
Ddx56Q9D0R4 Gm43512-201ENSMUST00000198495 176 ntBASIC1.73□□□□□ -2.13
Ddx56Q9D0R4 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.73□□□□□ -2.13
Ddx56Q9D0R4 Gm25409-201ENSMUST00000083764 131 ntBASIC1.73□□□□□ -2.13
Ddx56Q9D0R4 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Ddx56Q9D0R4 Gm25485-201ENSMUST00000104120 132 ntBASIC1.72□□□□□ -2.13
Ddx56Q9D0R4 Gm22386-201ENSMUST00000158192 129 ntBASIC1.72□□□□□ -2.13
Ddx56Q9D0R4 Gm20391-201ENSMUST00000174722 106 ntBASIC1.72□□□□□ -2.13
Ddx56Q9D0R4 Mir6406-201ENSMUST00000183592 120 ntBASIC1.72□□□□□ -2.13
Ddx56Q9D0R4 Gm28383-201ENSMUST00000187563 139 ntBASIC1.72□□□□□ -2.13
Ddx56Q9D0R4 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.72□□□□□ -2.13
Ddx56Q9D0R4 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.72□□□□□ -2.13
Ddx56Q9D0R4 Gm26922-201ENSMUST00000082687 72 ntBASIC1.72□□□□□ -2.13
Ddx56Q9D0R4 Gm14567-201ENSMUST00000117155 174 ntBASIC1.71□□□□□ -2.14
Ddx56Q9D0R4 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.71□□□□□ -2.14
Ddx56Q9D0R4 Gm26181-201ENSMUST00000157687 106 ntBASIC1.71□□□□□ -2.14
Ddx56Q9D0R4 Gm25838-201ENSMUST00000158920 120 ntBASIC1.71□□□□□ -2.14
Ddx56Q9D0R4 Traj60-201ENSMUST00000167781 54 ntBASIC1.71□□□□□ -2.14
Ddx56Q9D0R4 Gm22802-201ENSMUST00000175621 89 ntBASIC1.71□□□□□ -2.14
Ddx56Q9D0R4 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.71□□□□□ -2.14
Ddx56Q9D0R4 Gm45002-201ENSMUST00000208045 120 ntBASIC1.71□□□□□ -2.14
Ddx56Q9D0R4 Gm24406-201ENSMUST00000083026 128 ntBASIC1.71□□□□□ -2.14
Ddx56Q9D0R4 Gm24588-201ENSMUST00000116696 83 ntBASIC1.7□□□□□ -2.14
Ddx56Q9D0R4 Gm26073-201ENSMUST00000179906 127 ntBASIC1.7□□□□□ -2.14
Ddx56Q9D0R4 Gm44464-201ENSMUST00000198010 138 ntBASIC1.7□□□□□ -2.14
Ddx56Q9D0R4 Gm26074-201ENSMUST00000104063 129 ntBASIC1.69□□□□□ -2.14
Ddx56Q9D0R4 Gm25836-201ENSMUST00000158918 123 ntBASIC1.69□□□□□ -2.14
Ddx56Q9D0R4 Mir7050-201ENSMUST00000184636 60 ntBASIC1.69□□□□□ -2.14
Ddx56Q9D0R4 Gm25650-201ENSMUST00000083784 162 ntBASIC1.69□□□□□ -2.14
Ddx56Q9D0R4 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Ddx56Q9D0R4 Mir654-201ENSMUST00000104787 84 ntBASIC1.68□□□□□ -2.14
Ddx56Q9D0R4 Gm22850-201ENSMUST00000157714 82 ntBASIC1.68□□□□□ -2.14
Ddx56Q9D0R4 Gm27248-201ENSMUST00000184004 166 ntBASIC1.68□□□□□ -2.14
Ddx56Q9D0R4 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.68□□□□□ -2.14
Ddx56Q9D0R4 Snora20-201ENSMUST00000082703 128 ntBASIC1.68□□□□□ -2.14
Ddx56Q9D0R4 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
Ddx56Q9D0R4 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Ddx56Q9D0R4 Gm22761-201ENSMUST00000102278 96 ntBASIC1.67□□□□□ -2.14
Ddx56Q9D0R4 Gm23907-201ENSMUST00000104595 189 ntBASIC1.67□□□□□ -2.14
Ddx56Q9D0R4 Gm25985-201ENSMUST00000122677 107 ntBASIC1.67□□□□□ -2.14
Ddx56Q9D0R4 Gm22476-201ENSMUST00000158902 100 ntBASIC1.67□□□□□ -2.14
Ddx56Q9D0R4 Gm24174-201ENSMUST00000158933 111 ntBASIC1.67□□□□□ -2.14
Ddx56Q9D0R4 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Ddx56Q9D0R4 Gm16399-201ENSMUST00000181423 219 ntBASIC1.67□□□□□ -2.14
Ddx56Q9D0R4 Mir6351-201ENSMUST00000183826 99 ntBASIC1.67□□□□□ -2.14
Ddx56Q9D0R4 Mir7026-201ENSMUST00000184384 67 ntBASIC1.67□□□□□ -2.14
Ddx56Q9D0R4 Snord80-202ENSMUST00000199023 77 ntBASIC1.67□□□□□ -2.14
Ddx56Q9D0R4 Gm45654-201ENSMUST00000210980 123 ntBASIC1.67□□□□□ -2.14
Ddx56Q9D0R4 Gm18188-201ENSMUST00000219386 478 ntBASIC1.67□□□□□ -2.14
Ddx56Q9D0R4 Mir148b-201ENSMUST00000083626 97 ntBASIC1.67□□□□□ -2.14
Ddx56Q9D0R4 Gm22723-201ENSMUST00000083820 129 ntBASIC1.67□□□□□ -2.14
Ddx56Q9D0R4 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Ddx56Q9D0R4 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.66□□□□□ -2.14
Ddx56Q9D0R4 Gm24394-201ENSMUST00000158141 123 ntBASIC1.66□□□□□ -2.14
Ddx56Q9D0R4 Gm25495-201ENSMUST00000104431 131 ntBASIC1.65□□□□□ -2.15
Ddx56Q9D0R4 Gm22551-201ENSMUST00000157795 103 ntBASIC1.65□□□□□ -2.15
Ddx56Q9D0R4 Gm22200-201ENSMUST00000158614 67 ntBASIC1.65□□□□□ -2.15
Ddx56Q9D0R4 Gm24177-201ENSMUST00000158927 131 ntBASIC1.65□□□□□ -2.15
Ddx56Q9D0R4 Gm22914-201ENSMUST00000175195 77 ntBASIC1.65□□□□□ -2.15
Ddx56Q9D0R4 Gm18433-201ENSMUST00000192747 197 ntBASIC1.65□□□□□ -2.15
Ddx56Q9D0R4 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.65□□□□□ -2.15
Ddx56Q9D0R4 Gm26204-201ENSMUST00000082906 107 ntBASIC1.65□□□□□ -2.15
Ddx56Q9D0R4 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.65□□□□□ -2.15
Ddx56Q9D0R4 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Ddx56Q9D0R4 Gm16404-201ENSMUST00000177739 468 ntBASIC1.64□□□□□ -2.15
Ddx56Q9D0R4 Gm14598-201ENSMUST00000180109 468 ntBASIC1.64□□□□□ -2.15
Ddx56Q9D0R4 Gm14625-201ENSMUST00000180231 468 ntBASIC1.64□□□□□ -2.15
Ddx56Q9D0R4 Gm37624-201ENSMUST00000193751 219 ntBASIC1.64□□□□□ -2.15
Ddx56Q9D0R4 Gm37116-201ENSMUST00000195161 147 ntBASIC1.64□□□□□ -2.15
Ddx56Q9D0R4 Gm45471-201ENSMUST00000211270 281 ntBASIC1.64□□□□□ -2.15
Ddx56Q9D0R4 AC192091.2-201ENSMUST00000217869 117 ntBASIC1.64□□□□□ -2.15
Ddx56Q9D0R4 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.63□□□□□ -2.15
Ddx56Q9D0R4 Gm14568-201ENSMUST00000119321 294 ntBASIC1.63□□□□□ -2.15
Ddx56Q9D0R4 Gm26090-201ENSMUST00000157897 128 ntBASIC1.63□□□□□ -2.15
Ddx56Q9D0R4 Gm24880-201ENSMUST00000158776 85 ntBASIC1.63□□□□□ -2.15
Ddx56Q9D0R4 Gm25364-201ENSMUST00000158851 107 ntBASIC1.63□□□□□ -2.15
Ddx56Q9D0R4 Gm27420-201ENSMUST00000183823 79 ntBASIC1.63□□□□□ -2.15
Ddx56Q9D0R4 Gm37579-201ENSMUST00000194291 142 ntBASIC1.63□□□□□ -2.15
Ddx56Q9D0R4 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC1.63□□□□□ -2.15
Ddx56Q9D0R4 Gm22738-201ENSMUST00000083440 147 ntBASIC1.63□□□□□ -2.15
Ddx56Q9D0R4 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Ddx56Q9D0R4 Gm13588-201ENSMUST00000120026 135 ntBASIC1.62□□□□□ -2.15
Ddx56Q9D0R4 Gm13345-201ENSMUST00000121928 228 ntBASIC1.62□□□□□ -2.15
Ddx56Q9D0R4 Gm22557-201ENSMUST00000157804 102 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 176.3 ms