Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Ccdc43Q9CR29 Gm22163-201ENSMUST00000158408 135 ntBASIC0.67□□□□□ -2.3
Ccdc43Q9CR29 Mir6350-201ENSMUST00000183639 105 ntBASIC0.67□□□□□ -2.3
Ccdc43Q9CR29 Mir6540-201ENSMUST00000184886 108 ntBASIC0.67□□□□□ -2.3
Ccdc43Q9CR29 Gm34015-201ENSMUST00000194908 451 ntBASIC0.67□□□□□ -2.3
Ccdc43Q9CR29 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC0.67□□□□□ -2.3
Ccdc43Q9CR29 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.67□□□□□ -2.3
Ccdc43Q9CR29 Gm24616-201ENSMUST00000083274 139 ntBASIC0.67□□□□□ -2.3
Ccdc43Q9CR29 Mir216a-201ENSMUST00000083605 72 ntBASIC0.67□□□□□ -2.3
Ccdc43Q9CR29 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.66□□□□□ -2.3
Ccdc43Q9CR29 Gm25878-201ENSMUST00000104327 93 ntBASIC0.66□□□□□ -2.3
Ccdc43Q9CR29 Gm25901-201ENSMUST00000158494 130 ntBASIC0.66□□□□□ -2.3
Ccdc43Q9CR29 Gm23340-201ENSMUST00000158955 123 ntBASIC0.66□□□□□ -2.3
Ccdc43Q9CR29 Gm26236-201ENSMUST00000175536 137 ntBASIC0.66□□□□□ -2.3
Ccdc43Q9CR29 Gm28008-201ENSMUST00000184021 186 ntBASIC0.66□□□□□ -2.3
Ccdc43Q9CR29 Gm44468-201ENSMUST00000199516 105 ntBASIC0.66□□□□□ -2.3
Ccdc43Q9CR29 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
Ccdc43Q9CR29 Snord71-201ENSMUST00000104361 85 ntBASIC0.65□□□□□ -2.31
Ccdc43Q9CR29 Gm22673-201ENSMUST00000104415 131 ntBASIC0.65□□□□□ -2.31
Ccdc43Q9CR29 Gm12924-201ENSMUST00000121747 318 ntBASIC0.65□□□□□ -2.31
Ccdc43Q9CR29 Gm26274-201ENSMUST00000157103 321 ntBASIC0.65□□□□□ -2.31
Ccdc43Q9CR29 Gm26090-201ENSMUST00000157897 128 ntBASIC0.65□□□□□ -2.31
Ccdc43Q9CR29 Gm22522-201ENSMUST00000158271 151 ntBASIC0.65□□□□□ -2.31
Ccdc43Q9CR29 Gm36189-201ENSMUST00000204113 523 ntBASIC0.65□□□□□ -2.31
Ccdc43Q9CR29 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.65□□□□□ -2.31
Ccdc43Q9CR29 Gm23406-201ENSMUST00000082537 122 ntBASIC0.65□□□□□ -2.31
Ccdc43Q9CR29 Gm24920-201ENSMUST00000083018 85 ntBASIC0.65□□□□□ -2.31
Ccdc43Q9CR29 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.65□□□□□ -2.31
Ccdc43Q9CR29 Gm24765-201ENSMUST00000083691 103 ntBASIC0.65□□□□□ -2.31
Ccdc43Q9CR29 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.64□□□□□ -2.31
Ccdc43Q9CR29 Gm22387-201ENSMUST00000158191 131 ntBASIC0.64□□□□□ -2.31
Ccdc43Q9CR29 Gm16404-201ENSMUST00000177739 468 ntBASIC0.64□□□□□ -2.31
Ccdc43Q9CR29 Gm14598-201ENSMUST00000180109 468 ntBASIC0.64□□□□□ -2.31
Ccdc43Q9CR29 Gm14625-201ENSMUST00000180231 468 ntBASIC0.64□□□□□ -2.31
Ccdc43Q9CR29 AC125374.2-201ENSMUST00000214278 162 ntBASIC0.64□□□□□ -2.31
Ccdc43Q9CR29 AC154552.1-201ENSMUST00000222969 202 ntBASIC0.64□□□□□ -2.31
Ccdc43Q9CR29 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
Ccdc43Q9CR29 Gm24171-201ENSMUST00000104126 131 ntBASIC0.63□□□□□ -2.31
Ccdc43Q9CR29 Gm25976-201ENSMUST00000158695 130 ntBASIC0.63□□□□□ -2.31
Ccdc43Q9CR29 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.63□□□□□ -2.31
Ccdc43Q9CR29 Gm16265-201ENSMUST00000134558 108 ntBASIC0.62□□□□□ -2.31
Ccdc43Q9CR29 Gm24634-201ENSMUST00000158672 107 ntBASIC0.62□□□□□ -2.31
Ccdc43Q9CR29 Gm27521-201ENSMUST00000184022 64 ntBASIC0.62□□□□□ -2.31
Ccdc43Q9CR29 Gm28925-201ENSMUST00000188586 168 ntBASIC0.62□□□□□ -2.31
Ccdc43Q9CR29 Gm26447-201ENSMUST00000082448 129 ntBASIC0.62□□□□□ -2.31
Ccdc43Q9CR29 Mir500-201ENSMUST00000093600 92 ntBASIC0.62□□□□□ -2.31
Ccdc43Q9CR29 Gm25170-201ENSMUST00000104191 129 ntBASIC0.61□□□□□ -2.31
Ccdc43Q9CR29 Gm22482-201ENSMUST00000122563 359 ntBASIC0.61□□□□□ -2.31
Ccdc43Q9CR29 Gm26484-201ENSMUST00000158018 106 ntBASIC0.61□□□□□ -2.31
Ccdc43Q9CR29 Gm25044-201ENSMUST00000158603 104 ntBASIC0.61□□□□□ -2.31
Ccdc43Q9CR29 Gm25024-201ENSMUST00000179667 104 ntBASIC0.61□□□□□ -2.31
Ccdc43Q9CR29 Gm27289-201ENSMUST00000183341 82 ntBASIC0.61□□□□□ -2.31
Ccdc43Q9CR29 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.61□□□□□ -2.31
Ccdc43Q9CR29 Gm25142-201ENSMUST00000082698 107 ntBASIC0.61□□□□□ -2.31
Ccdc43Q9CR29 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.6□□□□□ -2.31
Ccdc43Q9CR29 Gm25424-201ENSMUST00000157612 58 ntBASIC0.6□□□□□ -2.31
Ccdc43Q9CR29 Gm26482-201ENSMUST00000158015 62 ntBASIC0.6□□□□□ -2.31
Ccdc43Q9CR29 Gm24323-201ENSMUST00000175342 77 ntBASIC0.6□□□□□ -2.31
Ccdc43Q9CR29 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.6□□□□□ -2.31
Ccdc43Q9CR29 Gm22565-201ENSMUST00000175540 69 ntBASIC0.6□□□□□ -2.31
Ccdc43Q9CR29 Gm22801-201ENSMUST00000175624 84 ntBASIC0.6□□□□□ -2.31
Ccdc43Q9CR29 Gm27845-201ENSMUST00000184479 114 ntBASIC0.6□□□□□ -2.31
Ccdc43Q9CR29 Gm44488-201ENSMUST00000199467 119 ntBASIC0.6□□□□□ -2.31
Ccdc43Q9CR29 Gm44563-201ENSMUST00000207958 178 ntBASIC0.6□□□□□ -2.31
Ccdc43Q9CR29 Gm45673-201ENSMUST00000210293 358 ntBASIC0.6□□□□□ -2.31
Ccdc43Q9CR29 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.6□□□□□ -2.31
Ccdc43Q9CR29 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.6□□□□□ -2.31
Ccdc43Q9CR29 Gm22302-201ENSMUST00000082657 106 ntBASIC0.6□□□□□ -2.31
Ccdc43Q9CR29 Gm12771-201ENSMUST00000120246 135 ntBASIC0.59□□□□□ -2.31
Ccdc43Q9CR29 Gm24015-201ENSMUST00000157725 232 ntBASIC0.59□□□□□ -2.31
Ccdc43Q9CR29 Gm26287-201ENSMUST00000158887 81 ntBASIC0.59□□□□□ -2.31
Ccdc43Q9CR29 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
Ccdc43Q9CR29 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.59□□□□□ -2.31
Ccdc43Q9CR29 Gm22786-201ENSMUST00000104086 122 ntBASIC0.58□□□□□ -2.32
Ccdc43Q9CR29 Mir466f-3-201ENSMUST00000104788 94 ntBASIC0.58□□□□□ -2.32
Ccdc43Q9CR29 Gm15069-201ENSMUST00000117792 192 ntBASIC0.58□□□□□ -2.32
Ccdc43Q9CR29 Gm15068-201ENSMUST00000119796 192 ntBASIC0.58□□□□□ -2.32
Ccdc43Q9CR29 Gm14946-201ENSMUST00000119859 296 ntBASIC0.58□□□□□ -2.32
Ccdc43Q9CR29 Gm13246-201ENSMUST00000120994 315 ntBASIC0.58□□□□□ -2.32
Ccdc43Q9CR29 Gm25664-201ENSMUST00000157697 107 ntBASIC0.58□□□□□ -2.32
Ccdc43Q9CR29 Gm22836-201ENSMUST00000158441 61 ntBASIC0.58□□□□□ -2.32
Ccdc43Q9CR29 Gm16307-201ENSMUST00000161269 210 ntBASIC0.58□□□□□ -2.32
Ccdc43Q9CR29 Gm45313-201ENSMUST00000210584 178 ntBASIC0.58□□□□□ -2.32
Ccdc43Q9CR29 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.58□□□□□ -2.32
Ccdc43Q9CR29 Gm22784-201ENSMUST00000104088 132 ntBASIC0.57□□□□□ -2.32
Ccdc43Q9CR29 Gm25274-201ENSMUST00000104296 135 ntBASIC0.57□□□□□ -2.32
Ccdc43Q9CR29 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
Ccdc43Q9CR29 Gm24385-201ENSMUST00000122694 350 ntBASIC0.57□□□□□ -2.32
Ccdc43Q9CR29 Gm22491-201ENSMUST00000157190 102 ntBASIC0.57□□□□□ -2.32
Ccdc43Q9CR29 Gm22586-201ENSMUST00000157507 122 ntBASIC0.57□□□□□ -2.32
Ccdc43Q9CR29 Gm24392-201ENSMUST00000158136 103 ntBASIC0.57□□□□□ -2.32
Ccdc43Q9CR29 Gm23853-201ENSMUST00000158375 104 ntBASIC0.57□□□□□ -2.32
Ccdc43Q9CR29 Gm24667-201ENSMUST00000158938 103 ntBASIC0.57□□□□□ -2.32
Ccdc43Q9CR29 Gm29140-201ENSMUST00000190187 476 ntBASIC0.57□□□□□ -2.32
Ccdc43Q9CR29 Gm25138-201ENSMUST00000083248 136 ntBASIC0.57□□□□□ -2.32
Ccdc43Q9CR29 Gm10222-201ENSMUST00000088336 294 ntBASIC0.57□□□□□ -2.32
Ccdc43Q9CR29 Gm24379-201ENSMUST00000122695 86 ntBASIC0.56□□□□□ -2.32
Ccdc43Q9CR29 Mir1933-201ENSMUST00000158930 88 ntBASIC0.56□□□□□ -2.32
Ccdc43Q9CR29 Gm22242-201ENSMUST00000175224 118 ntBASIC0.56□□□□□ -2.32
Ccdc43Q9CR29 Gm27668-201ENSMUST00000184188 120 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 293.2 ms