Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm28579-201ENSMUST00000186143 369 ntBASIC0.72□□□□□ -2.29
Sf3b1Q99NB9 Gm20923-201ENSMUST00000190009 319 ntBASIC0.72□□□□□ -2.29
Sf3b1Q99NB9 Mir468-201ENSMUST00000197332 78 ntBASIC0.72□□□□□ -2.29
Sf3b1Q99NB9 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
Sf3b1Q99NB9 DQ267101-201ENSMUST00000082562 73 ntBASIC0.72□□□□□ -2.29
Sf3b1Q99NB9 Snora19-201ENSMUST00000082962 132 ntBASIC0.72□□□□□ -2.29
Sf3b1Q99NB9 Gm23658-201ENSMUST00000083233 132 ntBASIC0.72□□□□□ -2.29
Sf3b1Q99NB9 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.72□□□□□ -2.29
Sf3b1Q99NB9 Gm25512-201ENSMUST00000083863 107 ntBASIC0.72□□□□□ -2.29
Sf3b1Q99NB9 Gm25875-201ENSMUST00000104323 107 ntBASIC0.71□□□□□ -2.3
Sf3b1Q99NB9 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.71□□□□□ -2.3
Sf3b1Q99NB9 Gm43563-201ENSMUST00000196761 198 ntBASIC0.71□□□□□ -2.3
Sf3b1Q99NB9 Mir7227-201ENSMUST00000200408 59 ntBASIC0.71□□□□□ -2.3
Sf3b1Q99NB9 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC0.71□□□□□ -2.3
Sf3b1Q99NB9 Gm23406-201ENSMUST00000082537 122 ntBASIC0.71□□□□□ -2.3
Sf3b1Q99NB9 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.71□□□□□ -2.3
Sf3b1Q99NB9 Gm13801-201ENSMUST00000120750 160 ntBASIC0.7□□□□□ -2.3
Sf3b1Q99NB9 Gm25544-201ENSMUST00000122676 120 ntBASIC0.7□□□□□ -2.3
Sf3b1Q99NB9 Gm23214-201ENSMUST00000122716 157 ntBASIC0.7□□□□□ -2.3
Sf3b1Q99NB9 Gm25558-201ENSMUST00000158083 106 ntBASIC0.7□□□□□ -2.3
Sf3b1Q99NB9 Gm22242-201ENSMUST00000175224 118 ntBASIC0.7□□□□□ -2.3
Sf3b1Q99NB9 Mir15a-201ENSMUST00000175266 84 ntBASIC0.7□□□□□ -2.3
Sf3b1Q99NB9 Gm22448-201ENSMUST00000179254 107 ntBASIC0.7□□□□□ -2.3
Sf3b1Q99NB9 Gm28256-201ENSMUST00000188953 139 ntBASIC0.7□□□□□ -2.3
Sf3b1Q99NB9 Gm28559-201ENSMUST00000190532 139 ntBASIC0.7□□□□□ -2.3
Sf3b1Q99NB9 Gm38060-201ENSMUST00000194822 464 ntBASIC0.7□□□□□ -2.3
Sf3b1Q99NB9 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.7□□□□□ -2.3
Sf3b1Q99NB9 AL603630.1-201ENSMUST00000214781 147 ntBASIC0.7□□□□□ -2.3
Sf3b1Q99NB9 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.7□□□□□ -2.3
Sf3b1Q99NB9 Gm22809-201ENSMUST00000082743 156 ntBASIC0.7□□□□□ -2.3
Sf3b1Q99NB9 Gm25538-201ENSMUST00000101943 107 ntBASIC0.69□□□□□ -2.3
Sf3b1Q99NB9 Gm28669-201ENSMUST00000188400 100 ntBASIC0.69□□□□□ -2.3
Sf3b1Q99NB9 Gm34015-201ENSMUST00000194908 451 ntBASIC0.69□□□□□ -2.3
Sf3b1Q99NB9 Gm42594-201ENSMUST00000199511 246 ntBASIC0.69□□□□□ -2.3
Sf3b1Q99NB9 Gm44052-201ENSMUST00000203382 396 ntBASIC0.69□□□□□ -2.3
Sf3b1Q99NB9 AC154552.1-201ENSMUST00000222969 202 ntBASIC0.69□□□□□ -2.3
Sf3b1Q99NB9 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.69□□□□□ -2.3
Sf3b1Q99NB9 Gm22283-201ENSMUST00000082556 161 ntBASIC0.69□□□□□ -2.3
Sf3b1Q99NB9 Mir362-201ENSMUST00000093592 65 ntBASIC0.69□□□□□ -2.3
Sf3b1Q99NB9 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.69□□□□□ -2.3
Sf3b1Q99NB9 Gm22479-201ENSMUST00000122566 81 ntBASIC0.68□□□□□ -2.3
Sf3b1Q99NB9 Gm22434-201ENSMUST00000158549 122 ntBASIC0.68□□□□□ -2.3
Sf3b1Q99NB9 Gm42988-201ENSMUST00000198116 225 ntBASIC0.68□□□□□ -2.3
Sf3b1Q99NB9 Gm7240-201ENSMUST00000220769 664 ntBASIC0.68□□□□□ -2.3
Sf3b1Q99NB9 Gm26447-201ENSMUST00000082448 129 ntBASIC0.68□□□□□ -2.3
Sf3b1Q99NB9 Gm26497-201ENSMUST00000083146 107 ntBASIC0.68□□□□□ -2.3
Sf3b1Q99NB9 Gm22469-201ENSMUST00000104118 133 ntBASIC0.67□□□□□ -2.3
Sf3b1Q99NB9 Mir669d-2-201ENSMUST00000116854 86 ntBASIC0.67□□□□□ -2.3
Sf3b1Q99NB9 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.67□□□□□ -2.3
Sf3b1Q99NB9 Gm16265-201ENSMUST00000134558 108 ntBASIC0.67□□□□□ -2.3
Sf3b1Q99NB9 Gm22491-201ENSMUST00000157190 102 ntBASIC0.67□□□□□ -2.3
Sf3b1Q99NB9 Gm23584-201ENSMUST00000157655 129 ntBASIC0.67□□□□□ -2.3
Sf3b1Q99NB9 Gm22553-201ENSMUST00000157797 295 ntBASIC0.67□□□□□ -2.3
Sf3b1Q99NB9 Gm24880-201ENSMUST00000158776 85 ntBASIC0.67□□□□□ -2.3
Sf3b1Q99NB9 Gm25643-201ENSMUST00000158874 103 ntBASIC0.67□□□□□ -2.3
Sf3b1Q99NB9 Mir6951-201ENSMUST00000183910 75 ntBASIC0.67□□□□□ -2.3
Sf3b1Q99NB9 Gm29140-201ENSMUST00000190187 476 ntBASIC0.67□□□□□ -2.3
Sf3b1Q99NB9 Gm38183-201ENSMUST00000193189 205 ntBASIC0.67□□□□□ -2.3
Sf3b1Q99NB9 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.67□□□□□ -2.3
Sf3b1Q99NB9 Gm13339-201ENSMUST00000120651 510 ntBASIC0.66□□□□□ -2.3
Sf3b1Q99NB9 Gm24345-201ENSMUST00000158706 124 ntBASIC0.66□□□□□ -2.3
Sf3b1Q99NB9 Mir6364-201ENSMUST00000183396 86 ntBASIC0.66□□□□□ -2.3
Sf3b1Q99NB9 Gm27521-201ENSMUST00000184022 64 ntBASIC0.66□□□□□ -2.3
Sf3b1Q99NB9 Gm44948-201ENSMUST00000209050 149 ntBASIC0.66□□□□□ -2.3
Sf3b1Q99NB9 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.66□□□□□ -2.3
Sf3b1Q99NB9 AC158981.3-202ENSMUST00000228906 523 ntBASIC0.66□□□□□ -2.3
Sf3b1Q99NB9 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC0.66□□□□□ -2.3
Sf3b1Q99NB9 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC0.65□□□□□ -2.3
Sf3b1Q99NB9 Gm23203-201ENSMUST00000104374 107 ntBASIC0.65□□□□□ -2.3
Sf3b1Q99NB9 Gm24724-201ENSMUST00000158230 107 ntBASIC0.65□□□□□ -2.3
Sf3b1Q99NB9 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.65□□□□□ -2.3
Sf3b1Q99NB9 Mir3079-201ENSMUST00000175428 90 ntBASIC0.65□□□□□ -2.3
Sf3b1Q99NB9 Gm26073-201ENSMUST00000179906 127 ntBASIC0.65□□□□□ -2.3
Sf3b1Q99NB9 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.65□□□□□ -2.3
Sf3b1Q99NB9 Gm45673-201ENSMUST00000210293 358 ntBASIC0.65□□□□□ -2.3
Sf3b1Q99NB9 Gm45544-201ENSMUST00000211130 88 ntBASIC0.65□□□□□ -2.3
Sf3b1Q99NB9 Mir181a-2-201ENSMUST00000083489 76 ntBASIC0.65□□□□□ -2.3
Sf3b1Q99NB9 Gm23321-201ENSMUST00000104465 126 ntBASIC0.64□□□□□ -2.31
Sf3b1Q99NB9 Gm25664-201ENSMUST00000157697 107 ntBASIC0.64□□□□□ -2.31
Sf3b1Q99NB9 Gm24747-201ENSMUST00000157835 87 ntBASIC0.64□□□□□ -2.31
Sf3b1Q99NB9 Gm16539-201ENSMUST00000160086 327 ntBASIC0.64□□□□□ -2.31
Sf3b1Q99NB9 Gm22450-201ENSMUST00000179641 107 ntBASIC0.64□□□□□ -2.31
Sf3b1Q99NB9 Gm25473-201ENSMUST00000180191 107 ntBASIC0.64□□□□□ -2.31
Sf3b1Q99NB9 Gm28016-201ENSMUST00000184594 196 ntBASIC0.64□□□□□ -2.31
Sf3b1Q99NB9 Gm24856-201ENSMUST00000082809 107 ntBASIC0.64□□□□□ -2.31
Sf3b1Q99NB9 Gm22571-201ENSMUST00000082984 70 ntBASIC0.64□□□□□ -2.31
Sf3b1Q99NB9 Gm26071-201ENSMUST00000083261 107 ntBASIC0.64□□□□□ -2.31
Sf3b1Q99NB9 Gm24764-201ENSMUST00000083686 199 ntBASIC0.64□□□□□ -2.31
Sf3b1Q99NB9 Gm23345-201ENSMUST00000083817 150 ntBASIC0.64□□□□□ -2.31
Sf3b1Q99NB9 Gm24521-201ENSMUST00000083958 107 ntBASIC0.64□□□□□ -2.31
Sf3b1Q99NB9 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.64□□□□□ -2.31
Sf3b1Q99NB9 Gm23126-201ENSMUST00000104260 134 ntBASIC0.64□□□□□ -2.31
Sf3b1Q99NB9 Gm14671-201ENSMUST00000121790 262 ntBASIC0.64□□□□□ -2.31
Sf3b1Q99NB9 Gm45313-201ENSMUST00000210584 178 ntBASIC0.64□□□□□ -2.31
Sf3b1Q99NB9 Mir101a-201ENSMUST00000083517 83 ntBASIC0.64□□□□□ -2.31
Sf3b1Q99NB9 Mir709-201ENSMUST00000102190 88 ntBASIC0.63□□□□□ -2.31
Sf3b1Q99NB9 Gm23987-201ENSMUST00000117039 129 ntBASIC0.63□□□□□ -2.31
Sf3b1Q99NB9 Gm25318-201ENSMUST00000122554 314 ntBASIC0.63□□□□□ -2.31
Sf3b1Q99NB9 Gm22482-201ENSMUST00000122563 359 ntBASIC0.63□□□□□ -2.31
Sf3b1Q99NB9 Gm22216-201ENSMUST00000157557 114 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms