Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Snord89-201ENSMUST00000104516 110 ntBASIC0.7□□□□□ -2.3
Cdk5rap3Q99LM2 Gm22491-201ENSMUST00000157190 102 ntBASIC0.7□□□□□ -2.3
Cdk5rap3Q99LM2 Gm26415-201ENSMUST00000157673 292 ntBASIC0.7□□□□□ -2.3
Cdk5rap3Q99LM2 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
Cdk5rap3Q99LM2 Gm28579-201ENSMUST00000186143 369 ntBASIC0.7□□□□□ -2.3
Cdk5rap3Q99LM2 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
Cdk5rap3Q99LM2 Snora20-201ENSMUST00000082703 128 ntBASIC0.7□□□□□ -2.3
Cdk5rap3Q99LM2 Mir709-201ENSMUST00000102190 88 ntBASIC0.69□□□□□ -2.3
Cdk5rap3Q99LM2 Gm25424-201ENSMUST00000157612 58 ntBASIC0.69□□□□□ -2.3
Cdk5rap3Q99LM2 Gm26482-201ENSMUST00000158015 62 ntBASIC0.69□□□□□ -2.3
Cdk5rap3Q99LM2 Gm29140-201ENSMUST00000190187 476 ntBASIC0.69□□□□□ -2.3
Cdk5rap3Q99LM2 Gm36189-201ENSMUST00000204113 523 ntBASIC0.69□□□□□ -2.3
Cdk5rap3Q99LM2 Gm25512-201ENSMUST00000083863 107 ntBASIC0.69□□□□□ -2.3
Cdk5rap3Q99LM2 Gm25878-201ENSMUST00000104327 93 ntBASIC0.68□□□□□ -2.3
Cdk5rap3Q99LM2 Gm25664-201ENSMUST00000157697 107 ntBASIC0.68□□□□□ -2.3
Cdk5rap3Q99LM2 Gm24015-201ENSMUST00000157725 232 ntBASIC0.68□□□□□ -2.3
Cdk5rap3Q99LM2 Gm26090-201ENSMUST00000157897 128 ntBASIC0.68□□□□□ -2.3
Cdk5rap3Q99LM2 Gm29107-201ENSMUST00000190910 347 ntBASIC0.68□□□□□ -2.3
Cdk5rap3Q99LM2 Gm44563-201ENSMUST00000207958 178 ntBASIC0.68□□□□□ -2.3
Cdk5rap3Q99LM2 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.68□□□□□ -2.3
Cdk5rap3Q99LM2 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.68□□□□□ -2.3
Cdk5rap3Q99LM2 Gm10222-201ENSMUST00000088336 294 ntBASIC0.68□□□□□ -2.3
Cdk5rap3Q99LM2 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Cdk5rap3Q99LM2 Gm26287-201ENSMUST00000158887 81 ntBASIC0.67□□□□□ -2.3
Cdk5rap3Q99LM2 Mir1954-201ENSMUST00000175595 86 ntBASIC0.67□□□□□ -2.3
Cdk5rap3Q99LM2 Gm36956-201ENSMUST00000193830 214 ntBASIC0.67□□□□□ -2.3
Cdk5rap3Q99LM2 Gm45313-201ENSMUST00000210584 178 ntBASIC0.67□□□□□ -2.3
Cdk5rap3Q99LM2 Mir101a-201ENSMUST00000083517 83 ntBASIC0.67□□□□□ -2.3
Cdk5rap3Q99LM2 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Cdk5rap3Q99LM2 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Cdk5rap3Q99LM2 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Cdk5rap3Q99LM2 Gm22784-201ENSMUST00000104088 132 ntBASIC0.66□□□□□ -2.3
Cdk5rap3Q99LM2 Gm25378-201ENSMUST00000104333 129 ntBASIC0.66□□□□□ -2.3
Cdk5rap3Q99LM2 Gm12797-201ENSMUST00000118645 273 ntBASIC0.66□□□□□ -2.3
Cdk5rap3Q99LM2 Gm22796-201ENSMUST00000157234 106 ntBASIC0.66□□□□□ -2.3
Cdk5rap3Q99LM2 Mir3109-201ENSMUST00000175301 88 ntBASIC0.66□□□□□ -2.3
Cdk5rap3Q99LM2 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.66□□□□□ -2.3
Cdk5rap3Q99LM2 Gm7240-201ENSMUST00000220769 664 ntBASIC0.66□□□□□ -2.3
Cdk5rap3Q99LM2 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.66□□□□□ -2.3
Cdk5rap3Q99LM2 Gm25142-201ENSMUST00000082698 107 ntBASIC0.66□□□□□ -2.3
Cdk5rap3Q99LM2 Gm22571-201ENSMUST00000082984 70 ntBASIC0.66□□□□□ -2.3
Cdk5rap3Q99LM2 Gm26301-201ENSMUST00000104813 95 ntBASIC0.65□□□□□ -2.31
Cdk5rap3Q99LM2 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.65□□□□□ -2.31
Cdk5rap3Q99LM2 Gm24392-201ENSMUST00000158136 103 ntBASIC0.65□□□□□ -2.31
Cdk5rap3Q99LM2 Gm22387-201ENSMUST00000158191 131 ntBASIC0.65□□□□□ -2.31
Cdk5rap3Q99LM2 Gm24667-201ENSMUST00000158938 103 ntBASIC0.65□□□□□ -2.31
Cdk5rap3Q99LM2 Gm28016-201ENSMUST00000184594 196 ntBASIC0.65□□□□□ -2.31
Cdk5rap3Q99LM2 Gm24616-201ENSMUST00000083274 139 ntBASIC0.65□□□□□ -2.31
Cdk5rap3Q99LM2 Gm24171-201ENSMUST00000104126 131 ntBASIC0.64□□□□□ -2.31
Cdk5rap3Q99LM2 Gm25044-201ENSMUST00000158603 104 ntBASIC0.64□□□□□ -2.31
Cdk5rap3Q99LM2 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.64□□□□□ -2.31
Cdk5rap3Q99LM2 Gm24764-201ENSMUST00000083686 199 ntBASIC0.64□□□□□ -2.31
Cdk5rap3Q99LM2 Gm15069-201ENSMUST00000117792 192 ntBASIC0.63□□□□□ -2.31
Cdk5rap3Q99LM2 Gm15068-201ENSMUST00000119796 192 ntBASIC0.63□□□□□ -2.31
Cdk5rap3Q99LM2 Gm11904-201ENSMUST00000120562 248 ntBASIC0.63□□□□□ -2.31
Cdk5rap3Q99LM2 Gm13246-201ENSMUST00000120994 315 ntBASIC0.63□□□□□ -2.31
Cdk5rap3Q99LM2 Gm22479-201ENSMUST00000122566 81 ntBASIC0.63□□□□□ -2.31
Cdk5rap3Q99LM2 Gm23214-201ENSMUST00000122716 157 ntBASIC0.63□□□□□ -2.31
Cdk5rap3Q99LM2 Gm26274-201ENSMUST00000157103 321 ntBASIC0.63□□□□□ -2.31
Cdk5rap3Q99LM2 Gm22586-201ENSMUST00000157507 122 ntBASIC0.63□□□□□ -2.31
Cdk5rap3Q99LM2 Gm22216-201ENSMUST00000157557 114 ntBASIC0.63□□□□□ -2.31
Cdk5rap3Q99LM2 Gm43406-201ENSMUST00000200356 334 ntBASIC0.63□□□□□ -2.31
Cdk5rap3Q99LM2 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.63□□□□□ -2.31
Cdk5rap3Q99LM2 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.63□□□□□ -2.31
Cdk5rap3Q99LM2 Mir216a-201ENSMUST00000083605 72 ntBASIC0.63□□□□□ -2.31
Cdk5rap3Q99LM2 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.63□□□□□ -2.31
Cdk5rap3Q99LM2 Gm12771-201ENSMUST00000120246 135 ntBASIC0.62□□□□□ -2.31
Cdk5rap3Q99LM2 Gm22434-201ENSMUST00000158549 122 ntBASIC0.62□□□□□ -2.31
Cdk5rap3Q99LM2 Gm22801-201ENSMUST00000175624 84 ntBASIC0.62□□□□□ -2.31
Cdk5rap3Q99LM2 Gm16404-201ENSMUST00000177739 468 ntBASIC0.62□□□□□ -2.31
Cdk5rap3Q99LM2 Gm14598-201ENSMUST00000180109 468 ntBASIC0.62□□□□□ -2.31
Cdk5rap3Q99LM2 Gm14625-201ENSMUST00000180231 468 ntBASIC0.62□□□□□ -2.31
Cdk5rap3Q99LM2 Gm45673-201ENSMUST00000210293 358 ntBASIC0.62□□□□□ -2.31
Cdk5rap3Q99LM2 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.62□□□□□ -2.31
Cdk5rap3Q99LM2 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.62□□□□□ -2.31
Cdk5rap3Q99LM2 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.62□□□□□ -2.31
Cdk5rap3Q99LM2 mt-Tr-201ENSMUST00000082412 68 ntBASIC0.62□□□□□ -2.31
Cdk5rap3Q99LM2 Gm24423-201ENSMUST00000101982 106 ntBASIC0.61□□□□□ -2.31
Cdk5rap3Q99LM2 Gm14906-201ENSMUST00000119265 390 ntBASIC0.61□□□□□ -2.31
Cdk5rap3Q99LM2 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.61□□□□□ -2.31
Cdk5rap3Q99LM2 Gm16307-201ENSMUST00000161269 210 ntBASIC0.61□□□□□ -2.31
Cdk5rap3Q99LM2 Gm27747-201ENSMUST00000184707 85 ntBASIC0.61□□□□□ -2.31
Cdk5rap3Q99LM2 Gm27656-201ENSMUST00000185055 80 ntBASIC0.61□□□□□ -2.31
Cdk5rap3Q99LM2 Gm23377-201ENSMUST00000082943 126 ntBASIC0.61□□□□□ -2.31
Cdk5rap3Q99LM2 Mir500-201ENSMUST00000093600 92 ntBASIC0.61□□□□□ -2.31
Cdk5rap3Q99LM2 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Cdk5rap3Q99LM2 Gm13797-201ENSMUST00000121792 120 ntBASIC0.6□□□□□ -2.31
Cdk5rap3Q99LM2 Gm16265-201ENSMUST00000134558 108 ntBASIC0.6□□□□□ -2.31
Cdk5rap3Q99LM2 Gm23219-201ENSMUST00000158123 87 ntBASIC0.6□□□□□ -2.31
Cdk5rap3Q99LM2 Gm25235-201ENSMUST00000179933 107 ntBASIC0.6□□□□□ -2.31
Cdk5rap3Q99LM2 AC109214.2-201ENSMUST00000220089 358 ntBASIC0.6□□□□□ -2.31
Cdk5rap3Q99LM2 Gm22786-201ENSMUST00000104086 122 ntBASIC0.59□□□□□ -2.31
Cdk5rap3Q99LM2 Gm22522-201ENSMUST00000158271 151 ntBASIC0.59□□□□□ -2.31
Cdk5rap3Q99LM2 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
Cdk5rap3Q99LM2 Gm27289-201ENSMUST00000183341 82 ntBASIC0.59□□□□□ -2.31
Cdk5rap3Q99LM2 Gm34015-201ENSMUST00000194908 451 ntBASIC0.59□□□□□ -2.31
Cdk5rap3Q99LM2 Gm44977-201ENSMUST00000205283 420 ntBASIC0.59□□□□□ -2.31
Cdk5rap3Q99LM2 Gm25135-201ENSMUST00000082648 143 ntBASIC0.59□□□□□ -2.31
Cdk5rap3Q99LM2 Gm25634-201ENSMUST00000082667 105 ntBASIC0.59□□□□□ -2.31
Cdk5rap3Q99LM2 Gm25138-201ENSMUST00000083248 136 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 162.1 ms