Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm44470-201ENSMUST00000203913 142 ntBASIC2.07□□□□□ -2.08
Brf1Q8CFK2 Gm43865-201ENSMUST00000204721 127 ntBASIC2.07□□□□□ -2.08
Brf1Q8CFK2 Gm44976-201ENSMUST00000205543 261 ntBASIC2.07□□□□□ -2.08
Brf1Q8CFK2 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Brf1Q8CFK2 Gm25485-201ENSMUST00000104120 132 ntBASIC2.06□□□□□ -2.08
Brf1Q8CFK2 Gm25878-201ENSMUST00000104327 93 ntBASIC2.06□□□□□ -2.08
Brf1Q8CFK2 Gm22545-201ENSMUST00000104350 132 ntBASIC2.06□□□□□ -2.08
Brf1Q8CFK2 Gm22494-201ENSMUST00000104495 128 ntBASIC2.06□□□□□ -2.08
Brf1Q8CFK2 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.06□□□□□ -2.08
Brf1Q8CFK2 Gm25980-201ENSMUST00000157176 218 ntBASIC2.06□□□□□ -2.08
Brf1Q8CFK2 Gm26049-201ENSMUST00000157313 108 ntBASIC2.06□□□□□ -2.08
Brf1Q8CFK2 Gm22163-201ENSMUST00000158408 135 ntBASIC2.06□□□□□ -2.08
Brf1Q8CFK2 Gm26004-201ENSMUST00000158804 116 ntBASIC2.06□□□□□ -2.08
Brf1Q8CFK2 Mir6379-201ENSMUST00000183392 115 ntBASIC2.06□□□□□ -2.08
Brf1Q8CFK2 Gm27722-201ENSMUST00000183908 76 ntBASIC2.06□□□□□ -2.08
Brf1Q8CFK2 AL772271.1-201ENSMUST00000196848 65 ntBASIC2.06□□□□□ -2.08
Brf1Q8CFK2 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Brf1Q8CFK2 Gm26074-201ENSMUST00000104063 129 ntBASIC2.05□□□□□ -2.08
Brf1Q8CFK2 Gm23469-201ENSMUST00000157131 104 ntBASIC2.05□□□□□ -2.08
Brf1Q8CFK2 Gm26415-201ENSMUST00000157673 292 ntBASIC2.05□□□□□ -2.08
Brf1Q8CFK2 Gm25658-201ENSMUST00000158472 128 ntBASIC2.05□□□□□ -2.08
Brf1Q8CFK2 Mir3969-201ENSMUST00000197106 92 ntBASIC2.05□□□□□ -2.08
Brf1Q8CFK2 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2.05□□□□□ -2.08
Brf1Q8CFK2 Gm45544-201ENSMUST00000211130 88 ntBASIC2.05□□□□□ -2.08
Brf1Q8CFK2 Gm23239-201ENSMUST00000083006 181 ntBASIC2.05□□□□□ -2.08
Brf1Q8CFK2 Snord61-201ENSMUST00000083176 71 ntBASIC2.05□□□□□ -2.08
Brf1Q8CFK2 Gm25409-201ENSMUST00000083764 131 ntBASIC2.05□□□□□ -2.08
Brf1Q8CFK2 Gm23947-201ENSMUST00000093636 107 ntBASIC2.05□□□□□ -2.08
Brf1Q8CFK2 Snord90-201ENSMUST00000104568 111 ntBASIC2.04□□□□□ -2.08
Brf1Q8CFK2 Gm15281-201ENSMUST00000125181 351 ntBASIC2.04□□□□□ -2.08
Brf1Q8CFK2 Gm24783-201ENSMUST00000157639 100 ntBASIC2.04□□□□□ -2.08
Brf1Q8CFK2 Gm22387-201ENSMUST00000158191 131 ntBASIC2.04□□□□□ -2.08
Brf1Q8CFK2 Gm22946-201ENSMUST00000158558 82 ntBASIC2.04□□□□□ -2.08
Brf1Q8CFK2 Gm23181-201ENSMUST00000158685 110 ntBASIC2.04□□□□□ -2.08
Brf1Q8CFK2 Gm26291-201ENSMUST00000158889 137 ntBASIC2.04□□□□□ -2.08
Brf1Q8CFK2 Gm24177-201ENSMUST00000158927 131 ntBASIC2.04□□□□□ -2.08
Brf1Q8CFK2 Gm21885-201ENSMUST00000178891 327 ntBASIC2.04□□□□□ -2.08
Brf1Q8CFK2 Gm27851-201ENSMUST00000183529 63 ntBASIC2.04□□□□□ -2.08
Brf1Q8CFK2 Mir6419-201ENSMUST00000184784 113 ntBASIC2.04□□□□□ -2.08
Brf1Q8CFK2 Mir8090-201ENSMUST00000185078 136 ntBASIC2.04□□□□□ -2.08
Brf1Q8CFK2 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC2.04□□□□□ -2.08
Brf1Q8CFK2 Mir489-201ENSMUST00000093599 107 ntBASIC2.04□□□□□ -2.08
Brf1Q8CFK2 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Brf1Q8CFK2 Gm22888-201ENSMUST00000158640 77 ntBASIC2.03□□□□□ -2.08
Brf1Q8CFK2 Gm25836-201ENSMUST00000158918 123 ntBASIC2.03□□□□□ -2.08
Brf1Q8CFK2 Gm26337-201ENSMUST00000178000 79 ntBASIC2.03□□□□□ -2.08
Brf1Q8CFK2 Gm23567-201ENSMUST00000178005 107 ntBASIC2.03□□□□□ -2.08
Brf1Q8CFK2 Gm37545-201ENSMUST00000186512 148 ntBASIC2.03□□□□□ -2.08
Brf1Q8CFK2 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.03□□□□□ -2.08
Brf1Q8CFK2 Mir30d-201ENSMUST00000083503 82 ntBASIC2.03□□□□□ -2.08
Brf1Q8CFK2 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.03□□□□□ -2.08
Brf1Q8CFK2 Mir669b-201ENSMUST00000102172 97 ntBASIC2.02□□□□□ -2.09
Brf1Q8CFK2 Gm14671-201ENSMUST00000121790 262 ntBASIC2.02□□□□□ -2.09
Brf1Q8CFK2 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC2.02□□□□□ -2.09
Brf1Q8CFK2 Gm24394-201ENSMUST00000158141 123 ntBASIC2.02□□□□□ -2.09
Brf1Q8CFK2 Gm23208-201ENSMUST00000158666 127 ntBASIC2.02□□□□□ -2.09
Brf1Q8CFK2 Gm29613-201ENSMUST00000185846 313 ntBASIC2.02□□□□□ -2.09
Brf1Q8CFK2 Gm29544-201ENSMUST00000188860 313 ntBASIC2.02□□□□□ -2.09
Brf1Q8CFK2 Gm28808-201ENSMUST00000190978 313 ntBASIC2.02□□□□□ -2.09
Brf1Q8CFK2 mt-Ta-201ENSMUST00000082398 69 ntBASIC2.02□□□□□ -2.09
Brf1Q8CFK2 Gm25588-201ENSMUST00000082501 140 ntBASIC2.02□□□□□ -2.09
Brf1Q8CFK2 Gm10813-201ENSMUST00000099936 90 ntBASIC2.02□□□□□ -2.09
Brf1Q8CFK2 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Brf1Q8CFK2 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Brf1Q8CFK2 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Brf1Q8CFK2 Gm23651-201ENSMUST00000116755 120 ntBASIC2.01□□□□□ -2.09
Brf1Q8CFK2 Gm22790-201ENSMUST00000157229 129 ntBASIC2.01□□□□□ -2.09
Brf1Q8CFK2 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.01□□□□□ -2.09
Brf1Q8CFK2 Gm25730-201ENSMUST00000178753 165 ntBASIC2.01□□□□□ -2.09
Brf1Q8CFK2 AC117232.1-201ENSMUST00000197964 119 ntBASIC2.01□□□□□ -2.09
Brf1Q8CFK2 Gm44385-201ENSMUST00000198781 81 ntBASIC2.01□□□□□ -2.09
Brf1Q8CFK2 Gm10172-201ENSMUST00000085929 558 ntBASIC2.01□□□□□ -2.09
Brf1Q8CFK2 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.01□□□□□ -2.09
Brf1Q8CFK2 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2□□□□□ -2.09
Brf1Q8CFK2 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2□□□□□ -2.09
Brf1Q8CFK2 Gm24345-201ENSMUST00000158706 124 ntBASIC2□□□□□ -2.09
Brf1Q8CFK2 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2□□□□□ -2.09
Brf1Q8CFK2 Gm24366-201ENSMUST00000175383 86 ntBASIC2□□□□□ -2.09
Brf1Q8CFK2 Mir7039-201ENSMUST00000183852 85 ntBASIC2□□□□□ -2.09
Brf1Q8CFK2 Gm45654-201ENSMUST00000210980 123 ntBASIC2□□□□□ -2.09
Brf1Q8CFK2 Gm22283-201ENSMUST00000082556 161 ntBASIC2□□□□□ -2.09
Brf1Q8CFK2 Gm22297-201ENSMUST00000083312 106 ntBASIC2□□□□□ -2.09
Brf1Q8CFK2 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2□□□□□ -2.09
Brf1Q8CFK2 Gm22761-201ENSMUST00000102278 96 ntBASIC1.99□□□□□ -2.09
Brf1Q8CFK2 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Brf1Q8CFK2 Gm26181-201ENSMUST00000157687 106 ntBASIC1.99□□□□□ -2.09
Brf1Q8CFK2 Gm24000-201ENSMUST00000158063 89 ntBASIC1.99□□□□□ -2.09
Brf1Q8CFK2 Gm25364-201ENSMUST00000158851 107 ntBASIC1.99□□□□□ -2.09
Brf1Q8CFK2 Gm24167-201ENSMUST00000177733 124 ntBASIC1.99□□□□□ -2.09
Brf1Q8CFK2 Gm23922-201ENSMUST00000178792 79 ntBASIC1.99□□□□□ -2.09
Brf1Q8CFK2 Gm24028-201ENSMUST00000178991 124 ntBASIC1.99□□□□□ -2.09
Brf1Q8CFK2 Gm24657-201ENSMUST00000180085 79 ntBASIC1.99□□□□□ -2.09
Brf1Q8CFK2 Gm22996-201ENSMUST00000180236 79 ntBASIC1.99□□□□□ -2.09
Brf1Q8CFK2 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.99□□□□□ -2.09
Brf1Q8CFK2 Gm28383-201ENSMUST00000187563 139 ntBASIC1.99□□□□□ -2.09
Brf1Q8CFK2 Mir466b-3-201ENSMUST00000103806 81 ntBASIC1.98□□□□□ -2.09
Brf1Q8CFK2 Gm22105-201ENSMUST00000116734 116 ntBASIC1.98□□□□□ -2.09
Brf1Q8CFK2 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.98□□□□□ -2.09
Brf1Q8CFK2 Mir7017-201ENSMUST00000184894 62 ntBASIC1.98□□□□□ -2.09
Brf1Q8CFK2 Gm26922-201ENSMUST00000082687 72 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 151.9 ms