Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm25775-201ENSMUST00000116716 121 ntBASIC0.03□□□□□ -2.4
Trub1Q8C0D0 Gm24795-201ENSMUST00000116737 121 ntBASIC0.03□□□□□ -2.4
Trub1Q8C0D0 Gm25171-201ENSMUST00000116926 121 ntBASIC0.03□□□□□ -2.4
Trub1Q8C0D0 Gm23989-201ENSMUST00000117030 66 ntBASIC0.03□□□□□ -2.4
Trub1Q8C0D0 Gm16186-201ENSMUST00000120132 216 ntBASIC0.03□□□□□ -2.4
Trub1Q8C0D0 Gm16307-201ENSMUST00000161269 210 ntBASIC0.03□□□□□ -2.4
Trub1Q8C0D0 Mir6896-201ENSMUST00000198033 73 ntBASIC0.03□□□□□ -2.4
Trub1Q8C0D0 Gm44057-201ENSMUST00000204547 96 ntBASIC0.03□□□□□ -2.4
Trub1Q8C0D0 Gm26495-201ENSMUST00000083152 137 ntBASIC0.03□□□□□ -2.4
Trub1Q8C0D0 Gm23763-201ENSMUST00000158345 60 ntBASIC0.02□□□□□ -2.41
Trub1Q8C0D0 Gm24549-201ENSMUST00000158647 139 ntBASIC0.02□□□□□ -2.41
Trub1Q8C0D0 Gm23821-201ENSMUST00000158738 106 ntBASIC0.02□□□□□ -2.41
Trub1Q8C0D0 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.02□□□□□ -2.41
Trub1Q8C0D0 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.01□□□□□ -2.41
Trub1Q8C0D0 Mir6350-201ENSMUST00000183639 105 ntBASIC0.01□□□□□ -2.41
Trub1Q8C0D0 Gm44457-201ENSMUST00000198109 76 ntBASIC0.01□□□□□ -2.41
Trub1Q8C0D0 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Trub1Q8C0D0 Gm12647-201ENSMUST00000118977 265 ntBASIC0□□□□□ -2.41
Trub1Q8C0D0 Gm38050-201ENSMUST00000191904 238 ntBASIC0□□□□□ -2.41
Trub1Q8C0D0 Gm3702-201ENSMUST00000211754 346 ntBASIC0□□□□□ -2.41
Trub1Q8C0D0 Gm29818-201ENSMUST00000218070 165 ntBASIC0□□□□□ -2.41
Trub1Q8C0D0 AC164297.5-201ENSMUST00000224365 198 ntBASIC0□□□□□ -2.41
Trub1Q8C0D0 CT010454.1-201ENSMUST00000225975 265 ntBASIC0□□□□□ -2.41
Trub1Q8C0D0 AC115735.2-201ENSMUST00000227135 351 ntBASIC0□□□□□ -2.41
Trub1Q8C0D0 Gm23404-201ENSMUST00000082543 97 ntBASIC0□□□□□ -2.41
Trub1Q8C0D0 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
Trub1Q8C0D0 Mir547-201ENSMUST00000102051 78 ntBASIC-0.01□□□□□ -2.41
Trub1Q8C0D0 Gm14671-201ENSMUST00000121790 262 ntBASIC-0.01□□□□□ -2.41
Trub1Q8C0D0 Gm14298-201ENSMUST00000139032 237 ntBASIC-0.01□□□□□ -2.41
Trub1Q8C0D0 Gm16356-201ENSMUST00000143300 169 ntBASIC-0.01□□□□□ -2.41
Trub1Q8C0D0 Gm23262-201ENSMUST00000158323 168 ntBASIC-0.01□□□□□ -2.41
Trub1Q8C0D0 Gm22466-201ENSMUST00000175278 69 ntBASIC-0.01□□□□□ -2.41
Trub1Q8C0D0 Gm23375-201ENSMUST00000175407 83 ntBASIC-0.01□□□□□ -2.41
Trub1Q8C0D0 Gm29013-201ENSMUST00000187431 237 ntBASIC-0.01□□□□□ -2.41
Trub1Q8C0D0 Mir3535-201ENSMUST00000197651 147 ntBASIC-0.01□□□□□ -2.41
Trub1Q8C0D0 Gm25929-201ENSMUST00000082784 107 ntBASIC-0.01□□□□□ -2.41
Trub1Q8C0D0 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC-0.01□□□□□ -2.41
Trub1Q8C0D0 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC-0.02□□□□□ -2.41
Trub1Q8C0D0 Gm15002-201ENSMUST00000118406 452 ntBASIC-0.02□□□□□ -2.41
Trub1Q8C0D0 Gm22586-201ENSMUST00000157507 122 ntBASIC-0.02□□□□□ -2.41
Trub1Q8C0D0 Gm23022-201ENSMUST00000158768 180 ntBASIC-0.02□□□□□ -2.41
Trub1Q8C0D0 Gm24415-201ENSMUST00000180218 107 ntBASIC-0.02□□□□□ -2.41
Trub1Q8C0D0 Mir7010-201ENSMUST00000183464 63 ntBASIC-0.02□□□□□ -2.41
Trub1Q8C0D0 Mir6377-201ENSMUST00000183760 114 ntBASIC-0.02□□□□□ -2.41
Trub1Q8C0D0 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC-0.02□□□□□ -2.41
Trub1Q8C0D0 AL935138.1-201ENSMUST00000215309 196 ntBASIC-0.02□□□□□ -2.41
Trub1Q8C0D0 Gm22421-201ENSMUST00000083058 107 ntBASIC-0.02□□□□□ -2.41
Trub1Q8C0D0 Gm26111-201ENSMUST00000083969 106 ntBASIC-0.02□□□□□ -2.41
Trub1Q8C0D0 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC-0.03□□□□□ -2.41
Trub1Q8C0D0 Gm11834-201ENSMUST00000122257 585 ntBASIC-0.03□□□□□ -2.41
Trub1Q8C0D0 Gm24629-201ENSMUST00000122762 89 ntBASIC-0.03□□□□□ -2.41
Trub1Q8C0D0 Gm25827-201ENSMUST00000157089 107 ntBASIC-0.03□□□□□ -2.41
Trub1Q8C0D0 Gm23059-201ENSMUST00000158978 107 ntBASIC-0.03□□□□□ -2.41
Trub1Q8C0D0 Gm22114-201ENSMUST00000177756 107 ntBASIC-0.03□□□□□ -2.41
Trub1Q8C0D0 Gm23793-201ENSMUST00000179396 117 ntBASIC-0.03□□□□□ -2.41
Trub1Q8C0D0 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.03□□□□□ -2.41
Trub1Q8C0D0 Gm43563-201ENSMUST00000196761 198 ntBASIC-0.03□□□□□ -2.41
Trub1Q8C0D0 Gm23060-201ENSMUST00000102345 109 ntBASIC-0.04□□□□□ -2.42
Trub1Q8C0D0 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
Trub1Q8C0D0 Gm25787-201ENSMUST00000104709 92 ntBASIC-0.04□□□□□ -2.42
Trub1Q8C0D0 Gm37763-201ENSMUST00000193445 120 ntBASIC-0.04□□□□□ -2.42
Trub1Q8C0D0 Mir7229-201ENSMUST00000197062 53 ntBASIC-0.04□□□□□ -2.42
Trub1Q8C0D0 AC154282.1-201ENSMUST00000223154 265 ntBASIC-0.04□□□□□ -2.42
Trub1Q8C0D0 Gm22555-201ENSMUST00000157801 62 ntBASIC-0.05□□□□□ -2.42
Trub1Q8C0D0 Gm23779-201ENSMUST00000157938 64 ntBASIC-0.05□□□□□ -2.42
Trub1Q8C0D0 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC-0.05□□□□□ -2.42
Trub1Q8C0D0 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC-0.05□□□□□ -2.42
Trub1Q8C0D0 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC-0.05□□□□□ -2.42
Trub1Q8C0D0 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.05□□□□□ -2.42
Trub1Q8C0D0 Gm43624-201ENSMUST00000197368 180 ntBASIC-0.05□□□□□ -2.42
Trub1Q8C0D0 Gm44345-201ENSMUST00000199560 135 ntBASIC-0.05□□□□□ -2.42
Trub1Q8C0D0 Gm25538-201ENSMUST00000101943 107 ntBASIC-0.06□□□□□ -2.42
Trub1Q8C0D0 Mir670-201ENSMUST00000102380 100 ntBASIC-0.06□□□□□ -2.42
Trub1Q8C0D0 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.06□□□□□ -2.42
Trub1Q8C0D0 Gm22021-201ENSMUST00000104353 107 ntBASIC-0.06□□□□□ -2.42
Trub1Q8C0D0 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC-0.06□□□□□ -2.42
Trub1Q8C0D0 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC-0.06□□□□□ -2.42
Trub1Q8C0D0 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC-0.06□□□□□ -2.42
Trub1Q8C0D0 Gm11904-201ENSMUST00000120562 248 ntBASIC-0.06□□□□□ -2.42
Trub1Q8C0D0 Gm28001-201ENSMUST00000183561 117 ntBASIC-0.06□□□□□ -2.42
Trub1Q8C0D0 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC-0.06□□□□□ -2.42
Trub1Q8C0D0 Mir200a-201ENSMUST00000083466 90 ntBASIC-0.06□□□□□ -2.42
Trub1Q8C0D0 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC-0.06□□□□□ -2.42
Trub1Q8C0D0 Gm23531-201ENSMUST00000104567 68 ntBASIC-0.07□□□□□ -2.42
Trub1Q8C0D0 Gm23982-201ENSMUST00000157141 106 ntBASIC-0.07□□□□□ -2.42
Trub1Q8C0D0 Gm25247-201ENSMUST00000175475 90 ntBASIC-0.07□□□□□ -2.42
Trub1Q8C0D0 Gm38183-201ENSMUST00000193189 205 ntBASIC-0.07□□□□□ -2.42
Trub1Q8C0D0 Snora19-201ENSMUST00000082962 132 ntBASIC-0.07□□□□□ -2.42
Trub1Q8C0D0 Gm23658-201ENSMUST00000083233 132 ntBASIC-0.07□□□□□ -2.42
Trub1Q8C0D0 Gm42606-201ENSMUST00000114209 239 ntBASIC-0.08□□□□□ -2.42
Trub1Q8C0D0 Gm12771-201ENSMUST00000120246 135 ntBASIC-0.08□□□□□ -2.42
Trub1Q8C0D0 Gm23640-201ENSMUST00000157860 104 ntBASIC-0.08□□□□□ -2.42
Trub1Q8C0D0 Gm22387-201ENSMUST00000158191 131 ntBASIC-0.08□□□□□ -2.42
Trub1Q8C0D0 Gm24728-201ENSMUST00000158226 125 ntBASIC-0.08□□□□□ -2.42
Trub1Q8C0D0 Gm23571-201ENSMUST00000180073 127 ntBASIC-0.08□□□□□ -2.42
Trub1Q8C0D0 Gm36189-201ENSMUST00000204113 523 ntBASIC-0.08□□□□□ -2.42
Trub1Q8C0D0 Gm44149-201ENSMUST00000204256 226 ntBASIC-0.08□□□□□ -2.42
Trub1Q8C0D0 Mir532-201ENSMUST00000093630 96 ntBASIC-0.08□□□□□ -2.42
Trub1Q8C0D0 Mir3089-201ENSMUST00000175350 84 ntBASIC-0.09□□□□□ -2.42
Trub1Q8C0D0 Gm25615-201ENSMUST00000177836 94 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 222.6 ms