Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm23324-201ENSMUST00000157421 131 ntBASIC2.93□□□□□ -1.94
Usp40Q8BWR4 Gm24480-201ENSMUST00000157442 103 ntBASIC2.93□□□□□ -1.94
Usp40Q8BWR4 Gm27443-201ENSMUST00000184660 98 ntBASIC2.93□□□□□ -1.94
Usp40Q8BWR4 Gm27991-201ENSMUST00000184804 137 ntBASIC2.93□□□□□ -1.94
Usp40Q8BWR4 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC2.93□□□□□ -1.94
Usp40Q8BWR4 AC126939.1-201ENSMUST00000224943 226 ntBASIC2.93□□□□□ -1.94
Usp40Q8BWR4 Snord78-201ENSMUST00000104032 66 ntBASIC2.92□□□□□ -1.94
Usp40Q8BWR4 Gm26074-201ENSMUST00000104063 129 ntBASIC2.92□□□□□ -1.94
Usp40Q8BWR4 Gm9009-201ENSMUST00000117321 326 ntBASIC2.92□□□□□ -1.94
Usp40Q8BWR4 Gm12213-201ENSMUST00000119924 353 ntBASIC2.92□□□□□ -1.94
Usp40Q8BWR4 Gm25382-201ENSMUST00000157811 97 ntBASIC2.92□□□□□ -1.94
Usp40Q8BWR4 Gm22853-201ENSMUST00000174974 131 ntBASIC2.92□□□□□ -1.94
Usp40Q8BWR4 Gm26498-201ENSMUST00000177799 79 ntBASIC2.92□□□□□ -1.94
Usp40Q8BWR4 Gm26230-201ENSMUST00000180141 79 ntBASIC2.92□□□□□ -1.94
Usp40Q8BWR4 Mir7-1-201ENSMUST00000083500 108 ntBASIC2.92□□□□□ -1.94
Usp40Q8BWR4 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Usp40Q8BWR4 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Usp40Q8BWR4 Gm14946-201ENSMUST00000119859 296 ntBASIC2.91□□□□□ -1.94
Usp40Q8BWR4 Gm11414-201ENSMUST00000121795 263 ntBASIC2.91□□□□□ -1.94
Usp40Q8BWR4 Gm24896-201ENSMUST00000122741 135 ntBASIC2.91□□□□□ -1.94
Usp40Q8BWR4 Gm22770-201ENSMUST00000158368 67 ntBASIC2.91□□□□□ -1.94
Usp40Q8BWR4 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.91□□□□□ -1.94
Usp40Q8BWR4 Gm43901-201ENSMUST00000203247 453 ntBASIC2.91□□□□□ -1.94
Usp40Q8BWR4 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.91□□□□□ -1.94
Usp40Q8BWR4 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
Usp40Q8BWR4 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.91□□□□□ -1.94
Usp40Q8BWR4 Gm24098-201ENSMUST00000102075 109 ntBASIC2.9□□□□□ -1.95
Usp40Q8BWR4 Gm25381-201ENSMUST00000102078 109 ntBASIC2.9□□□□□ -1.95
Usp40Q8BWR4 Gm22935-201ENSMUST00000103960 104 ntBASIC2.9□□□□□ -1.95
Usp40Q8BWR4 Gm24946-201ENSMUST00000158332 106 ntBASIC2.9□□□□□ -1.95
Usp40Q8BWR4 Gm20613-201ENSMUST00000175828 345 ntBASIC2.9□□□□□ -1.95
Usp40Q8BWR4 Gm26435-201ENSMUST00000179026 107 ntBASIC2.9□□□□□ -1.95
Usp40Q8BWR4 Mir6901-201ENSMUST00000185062 62 ntBASIC2.9□□□□□ -1.95
Usp40Q8BWR4 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.9□□□□□ -1.95
Usp40Q8BWR4 Mir9-2-201ENSMUST00000083490 72 ntBASIC2.9□□□□□ -1.95
Usp40Q8BWR4 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.9□□□□□ -1.95
Usp40Q8BWR4 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
Usp40Q8BWR4 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
Usp40Q8BWR4 Gm22772-201ENSMUST00000104451 121 ntBASIC2.89□□□□□ -1.95
Usp40Q8BWR4 Gm25825-201ENSMUST00000157091 124 ntBASIC2.89□□□□□ -1.95
Usp40Q8BWR4 Gm26345-201ENSMUST00000157534 120 ntBASIC2.89□□□□□ -1.95
Usp40Q8BWR4 Gm24900-201ENSMUST00000158128 134 ntBASIC2.89□□□□□ -1.95
Usp40Q8BWR4 Gm22416-201ENSMUST00000158590 88 ntBASIC2.89□□□□□ -1.95
Usp40Q8BWR4 Gm25119-201ENSMUST00000158815 88 ntBASIC2.89□□□□□ -1.95
Usp40Q8BWR4 Gm24177-201ENSMUST00000158927 131 ntBASIC2.89□□□□□ -1.95
Usp40Q8BWR4 Gm5224-201ENSMUST00000183060 350 ntBASIC2.89□□□□□ -1.95
Usp40Q8BWR4 Gm44464-201ENSMUST00000198010 138 ntBASIC2.89□□□□□ -1.95
Usp40Q8BWR4 Gm45288-201ENSMUST00000210236 151 ntBASIC2.89□□□□□ -1.95
Usp40Q8BWR4 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Usp40Q8BWR4 Gm24126-201ENSMUST00000104111 106 ntBASIC2.88□□□□□ -1.95
Usp40Q8BWR4 Gm24280-201ENSMUST00000104237 134 ntBASIC2.88□□□□□ -1.95
Usp40Q8BWR4 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Usp40Q8BWR4 Gm22796-201ENSMUST00000157234 106 ntBASIC2.88□□□□□ -1.95
Usp40Q8BWR4 Gm23588-201ENSMUST00000157659 99 ntBASIC2.88□□□□□ -1.95
Usp40Q8BWR4 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.88□□□□□ -1.95
Usp40Q8BWR4 Gm22129-201ENSMUST00000179034 107 ntBASIC2.88□□□□□ -1.95
Usp40Q8BWR4 Mir489-201ENSMUST00000093599 107 ntBASIC2.88□□□□□ -1.95
Usp40Q8BWR4 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Usp40Q8BWR4 Gm23011-201ENSMUST00000104148 132 ntBASIC2.87□□□□□ -1.95
Usp40Q8BWR4 Gm23043-201ENSMUST00000157890 109 ntBASIC2.87□□□□□ -1.95
Usp40Q8BWR4 Mir6405-201ENSMUST00000184584 124 ntBASIC2.87□□□□□ -1.95
Usp40Q8BWR4 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.87□□□□□ -1.95
Usp40Q8BWR4 Gm26265-201ENSMUST00000083277 135 ntBASIC2.87□□□□□ -1.95
Usp40Q8BWR4 Gm25513-201ENSMUST00000083861 162 ntBASIC2.87□□□□□ -1.95
Usp40Q8BWR4 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Usp40Q8BWR4 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
Usp40Q8BWR4 Gm24375-201ENSMUST00000104397 132 ntBASIC2.86□□□□□ -1.95
Usp40Q8BWR4 Gm22451-201ENSMUST00000122803 151 ntBASIC2.86□□□□□ -1.95
Usp40Q8BWR4 Gm16328-201ENSMUST00000126985 196 ntBASIC2.86□□□□□ -1.95
Usp40Q8BWR4 Gm24559-201ENSMUST00000157519 121 ntBASIC2.86□□□□□ -1.95
Usp40Q8BWR4 Mir669n-201ENSMUST00000158636 54 ntBASIC2.86□□□□□ -1.95
Usp40Q8BWR4 Gm22638-201ENSMUST00000179674 107 ntBASIC2.86□□□□□ -1.95
Usp40Q8BWR4 Mir3069-201ENSMUST00000198802 65 ntBASIC2.86□□□□□ -1.95
Usp40Q8BWR4 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.86□□□□□ -1.95
Usp40Q8BWR4 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Usp40Q8BWR4 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Usp40Q8BWR4 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.85□□□□□ -1.95
Usp40Q8BWR4 Mir758-201ENSMUST00000103260 81 ntBASIC2.85□□□□□ -1.95
Usp40Q8BWR4 Gm22678-201ENSMUST00000116974 101 ntBASIC2.85□□□□□ -1.95
Usp40Q8BWR4 Gm22067-201ENSMUST00000122790 107 ntBASIC2.85□□□□□ -1.95
Usp40Q8BWR4 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.85□□□□□ -1.95
Usp40Q8BWR4 Mir155-201ENSMUST00000083463 65 ntBASIC2.85□□□□□ -1.95
Usp40Q8BWR4 n-R5s183-201ENSMUST00000083939 115 ntBASIC2.85□□□□□ -1.95
Usp40Q8BWR4 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Usp40Q8BWR4 Gm23109-201ENSMUST00000116867 126 ntBASIC2.84□□□□□ -1.95
Usp40Q8BWR4 Mir3094-201ENSMUST00000175121 64 ntBASIC2.84□□□□□ -1.95
Usp40Q8BWR4 AC122327.1-201ENSMUST00000220778 108 ntBASIC2.84□□□□□ -1.95
Usp40Q8BWR4 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.84□□□□□ -1.95
Usp40Q8BWR4 Gm22306-201ENSMUST00000082692 107 ntBASIC2.84□□□□□ -1.95
Usp40Q8BWR4 Gm23040-201ENSMUST00000083869 163 ntBASIC2.84□□□□□ -1.95
Usp40Q8BWR4 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Usp40Q8BWR4 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.84□□□□□ -1.96
Usp40Q8BWR4 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
Usp40Q8BWR4 Gm25610-201ENSMUST00000104016 129 ntBASIC2.83□□□□□ -1.96
Usp40Q8BWR4 Gm22270-201ENSMUST00000104034 132 ntBASIC2.83□□□□□ -1.96
Usp40Q8BWR4 Gm14709-201ENSMUST00000121225 304 ntBASIC2.83□□□□□ -1.96
Usp40Q8BWR4 Gm16510-201ENSMUST00000153501 249 ntBASIC2.83□□□□□ -1.96
Usp40Q8BWR4 Gm24913-201ENSMUST00000157286 107 ntBASIC2.83□□□□□ -1.96
Usp40Q8BWR4 Gm26415-201ENSMUST00000157673 292 ntBASIC2.83□□□□□ -1.96
Usp40Q8BWR4 Gm25460-201ENSMUST00000157954 127 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 131.3 ms