Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Mir1933-201ENSMUST00000158930 88 ntBASIC0.42□□□□□ -2.34
Ccdc40Q8BI79 Gm23416-201ENSMUST00000175520 95 ntBASIC0.42□□□□□ -2.34
Ccdc40Q8BI79 Gm22118-201ENSMUST00000175593 171 ntBASIC0.42□□□□□ -2.34
Ccdc40Q8BI79 Gm44462-201ENSMUST00000199696 129 ntBASIC0.42□□□□□ -2.34
Ccdc40Q8BI79 Gm24316-201ENSMUST00000083041 107 ntBASIC0.42□□□□□ -2.34
Ccdc40Q8BI79 Mir181a-1-201ENSMUST00000083631 87 ntBASIC0.42□□□□□ -2.34
Ccdc40Q8BI79 Gm24258-201ENSMUST00000083739 133 ntBASIC0.42□□□□□ -2.34
Ccdc40Q8BI79 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
Ccdc40Q8BI79 Gm24171-201ENSMUST00000104126 131 ntBASIC0.41□□□□□ -2.34
Ccdc40Q8BI79 Gm6985-201ENSMUST00000121255 271 ntBASIC0.41□□□□□ -2.34
Ccdc40Q8BI79 Gm22097-201ENSMUST00000157929 278 ntBASIC0.41□□□□□ -2.34
Ccdc40Q8BI79 Gm25044-201ENSMUST00000158603 104 ntBASIC0.41□□□□□ -2.34
Ccdc40Q8BI79 Snora19-201ENSMUST00000082962 132 ntBASIC0.41□□□□□ -2.34
Ccdc40Q8BI79 Gm23658-201ENSMUST00000083233 132 ntBASIC0.41□□□□□ -2.34
Ccdc40Q8BI79 Mir10b-201ENSMUST00000083566 68 ntBASIC0.41□□□□□ -2.34
Ccdc40Q8BI79 Gm44211-201ENSMUST00000204867 145 ntBASIC0.4□□□□□ -2.35
Ccdc40Q8BI79 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.4□□□□□ -2.35
Ccdc40Q8BI79 Gm26326-201ENSMUST00000083070 129 ntBASIC0.4□□□□□ -2.35
Ccdc40Q8BI79 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
Ccdc40Q8BI79 Gm6272-201ENSMUST00000121256 171 ntBASIC0.39□□□□□ -2.35
Ccdc40Q8BI79 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.39□□□□□ -2.35
Ccdc40Q8BI79 Mir5624-201ENSMUST00000176635 61 ntBASIC0.39□□□□□ -2.35
Ccdc40Q8BI79 Gm25615-201ENSMUST00000177836 94 ntBASIC0.39□□□□□ -2.35
Ccdc40Q8BI79 Gm45673-201ENSMUST00000210293 358 ntBASIC0.39□□□□□ -2.35
Ccdc40Q8BI79 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.39□□□□□ -2.35
Ccdc40Q8BI79 Gm22759-201ENSMUST00000102276 96 ntBASIC0.38□□□□□ -2.35
Ccdc40Q8BI79 Gm25170-201ENSMUST00000104191 129 ntBASIC0.38□□□□□ -2.35
Ccdc40Q8BI79 Gm24275-201ENSMUST00000116780 146 ntBASIC0.38□□□□□ -2.35
Ccdc40Q8BI79 Gm15030-201ENSMUST00000119804 484 ntBASIC0.38□□□□□ -2.35
Ccdc40Q8BI79 Gm23672-201ENSMUST00000157471 107 ntBASIC0.38□□□□□ -2.35
Ccdc40Q8BI79 Gm26415-201ENSMUST00000157673 292 ntBASIC0.38□□□□□ -2.35
Ccdc40Q8BI79 Gm23008-201ENSMUST00000158946 80 ntBASIC0.38□□□□□ -2.35
Ccdc40Q8BI79 Gm43563-201ENSMUST00000196761 198 ntBASIC0.38□□□□□ -2.35
Ccdc40Q8BI79 AC166341.3-201ENSMUST00000221861 114 ntBASIC0.38□□□□□ -2.35
Ccdc40Q8BI79 Gm25814-201ENSMUST00000082754 107 ntBASIC0.38□□□□□ -2.35
Ccdc40Q8BI79 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.38□□□□□ -2.35
Ccdc40Q8BI79 Mir759-201ENSMUST00000103254 98 ntBASIC0.37□□□□□ -2.35
Ccdc40Q8BI79 Gm26303-201ENSMUST00000116845 119 ntBASIC0.37□□□□□ -2.35
Ccdc40Q8BI79 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC0.37□□□□□ -2.35
Ccdc40Q8BI79 Gm44055-201ENSMUST00000204376 247 ntBASIC0.37□□□□□ -2.35
Ccdc40Q8BI79 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC0.37□□□□□ -2.35
Ccdc40Q8BI79 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.37□□□□□ -2.35
Ccdc40Q8BI79 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Ccdc40Q8BI79 Gm25274-201ENSMUST00000104296 135 ntBASIC0.36□□□□□ -2.35
Ccdc40Q8BI79 Gm13725-201ENSMUST00000122139 207 ntBASIC0.36□□□□□ -2.35
Ccdc40Q8BI79 Gm25882-201ENSMUST00000157784 85 ntBASIC0.36□□□□□ -2.35
Ccdc40Q8BI79 Gm22983-201ENSMUST00000158308 104 ntBASIC0.36□□□□□ -2.35
Ccdc40Q8BI79 Gm23375-201ENSMUST00000175407 83 ntBASIC0.36□□□□□ -2.35
Ccdc40Q8BI79 Gm42506-201ENSMUST00000202009 150 ntBASIC0.36□□□□□ -2.35
Ccdc40Q8BI79 CT010505.1-201ENSMUST00000227026 396 ntBASIC0.36□□□□□ -2.35
Ccdc40Q8BI79 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Ccdc40Q8BI79 Gm15069-201ENSMUST00000117792 192 ntBASIC0.35□□□□□ -2.35
Ccdc40Q8BI79 Gm15068-201ENSMUST00000119796 192 ntBASIC0.35□□□□□ -2.35
Ccdc40Q8BI79 Gm22984-201ENSMUST00000122751 122 ntBASIC0.35□□□□□ -2.35
Ccdc40Q8BI79 Gm26379-202ENSMUST00000200225 132 ntBASIC0.35□□□□□ -2.35
Ccdc40Q8BI79 Gm36189-201ENSMUST00000204113 523 ntBASIC0.35□□□□□ -2.35
Ccdc40Q8BI79 Gm25875-201ENSMUST00000104323 107 ntBASIC0.34□□□□□ -2.36
Ccdc40Q8BI79 Gm11248-201ENSMUST00000119568 201 ntBASIC0.34□□□□□ -2.36
Ccdc40Q8BI79 Gm12837-201ENSMUST00000120131 373 ntBASIC0.34□□□□□ -2.36
Ccdc40Q8BI79 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC0.34□□□□□ -2.36
Ccdc40Q8BI79 Gm26285-201ENSMUST00000177923 107 ntBASIC0.34□□□□□ -2.36
Ccdc40Q8BI79 Gm44828-201ENSMUST00000203745 106 ntBASIC0.34□□□□□ -2.36
Ccdc40Q8BI79 Gm43944-201ENSMUST00000205220 120 ntBASIC0.34□□□□□ -2.36
Ccdc40Q8BI79 Gm45005-201ENSMUST00000206640 157 ntBASIC0.34□□□□□ -2.36
Ccdc40Q8BI79 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC0.34□□□□□ -2.36
Ccdc40Q8BI79 AC164117.2-201ENSMUST00000222090 327 ntBASIC0.34□□□□□ -2.36
Ccdc40Q8BI79 Gm23622-201ENSMUST00000082460 107 ntBASIC0.34□□□□□ -2.36
Ccdc40Q8BI79 Gm25110-201ENSMUST00000116684 121 ntBASIC0.33□□□□□ -2.36
Ccdc40Q8BI79 Gm25775-201ENSMUST00000116716 121 ntBASIC0.33□□□□□ -2.36
Ccdc40Q8BI79 Gm24795-201ENSMUST00000116737 121 ntBASIC0.33□□□□□ -2.36
Ccdc40Q8BI79 Gm25171-201ENSMUST00000116926 121 ntBASIC0.33□□□□□ -2.36
Ccdc40Q8BI79 Gm14919-201ENSMUST00000120839 390 ntBASIC0.33□□□□□ -2.36
Ccdc40Q8BI79 Gm13246-201ENSMUST00000120994 315 ntBASIC0.33□□□□□ -2.36
Ccdc40Q8BI79 Gm13577-201ENSMUST00000121365 205 ntBASIC0.33□□□□□ -2.36
Ccdc40Q8BI79 Gm22706-201ENSMUST00000157907 112 ntBASIC0.33□□□□□ -2.36
Ccdc40Q8BI79 Gm24547-201ENSMUST00000158649 149 ntBASIC0.33□□□□□ -2.36
Ccdc40Q8BI79 Gm25300-201ENSMUST00000175284 84 ntBASIC0.33□□□□□ -2.36
Ccdc40Q8BI79 Gm38109-201ENSMUST00000195386 181 ntBASIC0.33□□□□□ -2.36
Ccdc40Q8BI79 Mir547-201ENSMUST00000102051 78 ntBASIC0.32□□□□□ -2.36
Ccdc40Q8BI79 Gm23991-201ENSMUST00000117033 93 ntBASIC0.32□□□□□ -2.36
Ccdc40Q8BI79 Gm14301-201ENSMUST00000120181 324 ntBASIC0.32□□□□□ -2.36
Ccdc40Q8BI79 Gm26152-201ENSMUST00000157427 101 ntBASIC0.32□□□□□ -2.36
Ccdc40Q8BI79 Gm24634-201ENSMUST00000158672 107 ntBASIC0.32□□□□□ -2.36
Ccdc40Q8BI79 Gm23186-201ENSMUST00000180078 107 ntBASIC0.32□□□□□ -2.36
Ccdc40Q8BI79 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC0.32□□□□□ -2.36
Ccdc40Q8BI79 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
Ccdc40Q8BI79 Gm22709-201ENSMUST00000116893 111 ntBASIC0.31□□□□□ -2.36
Ccdc40Q8BI79 Gm15289-201ENSMUST00000117793 244 ntBASIC0.31□□□□□ -2.36
Ccdc40Q8BI79 Gm15213-201ENSMUST00000122098 216 ntBASIC0.31□□□□□ -2.36
Ccdc40Q8BI79 Gm24015-201ENSMUST00000157725 232 ntBASIC0.31□□□□□ -2.36
Ccdc40Q8BI79 Gm24549-201ENSMUST00000158647 139 ntBASIC0.31□□□□□ -2.36
Ccdc40Q8BI79 Gm22466-201ENSMUST00000175278 69 ntBASIC0.31□□□□□ -2.36
Ccdc40Q8BI79 Gm44458-201ENSMUST00000196594 143 ntBASIC0.31□□□□□ -2.36
Ccdc40Q8BI79 Gm44858-201ENSMUST00000207360 154 ntBASIC0.31□□□□□ -2.36
Ccdc40Q8BI79 Gm45541-201ENSMUST00000210443 54 ntBASIC0.31□□□□□ -2.36
Ccdc40Q8BI79 Gm26116-201ENSMUST00000175600 77 ntBASIC0.3□□□□□ -2.36
Ccdc40Q8BI79 Gm27668-201ENSMUST00000184188 120 ntBASIC0.3□□□□□ -2.36
Ccdc40Q8BI79 Mir6394-201ENSMUST00000184738 99 ntBASIC0.3□□□□□ -2.36
Ccdc40Q8BI79 Gm37404-201ENSMUST00000195726 359 ntBASIC0.3□□□□□ -2.36
Ccdc40Q8BI79 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 156.2 ms