Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.2□□□□□ -2.38
Clrn3Q8BHH8 Mir710-201ENSMUST00000102088 110 ntBASIC0.19□□□□□ -2.38
Clrn3Q8BHH8 Gm23126-201ENSMUST00000104260 134 ntBASIC0.19□□□□□ -2.38
Clrn3Q8BHH8 Gm25878-201ENSMUST00000104327 93 ntBASIC0.19□□□□□ -2.38
Clrn3Q8BHH8 Gm15289-201ENSMUST00000117793 244 ntBASIC0.19□□□□□ -2.38
Clrn3Q8BHH8 Gm22387-201ENSMUST00000158191 131 ntBASIC0.19□□□□□ -2.38
Clrn3Q8BHH8 Gm27475-201ENSMUST00000183420 61 ntBASIC0.19□□□□□ -2.38
Clrn3Q8BHH8 Mir7065-201ENSMUST00000185110 61 ntBASIC0.19□□□□□ -2.38
Clrn3Q8BHH8 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC0.19□□□□□ -2.38
Clrn3Q8BHH8 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.19□□□□□ -2.38
Clrn3Q8BHH8 Gm45541-201ENSMUST00000210443 54 ntBASIC0.19□□□□□ -2.38
Clrn3Q8BHH8 Snora20-201ENSMUST00000082703 128 ntBASIC0.19□□□□□ -2.38
Clrn3Q8BHH8 Rny3-201ENSMUST00000083011 102 ntBASIC0.19□□□□□ -2.38
Clrn3Q8BHH8 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.19□□□□□ -2.38
Clrn3Q8BHH8 Gm25416-201ENSMUST00000104221 107 ntBASIC0.18□□□□□ -2.38
Clrn3Q8BHH8 Gm13801-201ENSMUST00000120750 160 ntBASIC0.18□□□□□ -2.38
Clrn3Q8BHH8 Gm14671-201ENSMUST00000121790 262 ntBASIC0.18□□□□□ -2.38
Clrn3Q8BHH8 Gm23982-201ENSMUST00000157141 106 ntBASIC0.18□□□□□ -2.38
Clrn3Q8BHH8 Gm22887-201ENSMUST00000178586 107 ntBASIC0.18□□□□□ -2.38
Clrn3Q8BHH8 Gm27717-201ENSMUST00000183933 151 ntBASIC0.18□□□□□ -2.38
Clrn3Q8BHH8 Mir6365-201ENSMUST00000183990 101 ntBASIC0.18□□□□□ -2.38
Clrn3Q8BHH8 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC0.18□□□□□ -2.38
Clrn3Q8BHH8 Gm45471-201ENSMUST00000211270 281 ntBASIC0.18□□□□□ -2.38
Clrn3Q8BHH8 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.17□□□□□ -2.38
Clrn3Q8BHH8 Gm24171-201ENSMUST00000104126 131 ntBASIC0.17□□□□□ -2.38
Clrn3Q8BHH8 Gm23375-201ENSMUST00000175407 83 ntBASIC0.17□□□□□ -2.38
Clrn3Q8BHH8 Gm44387-201ENSMUST00000196298 145 ntBASIC0.17□□□□□ -2.38
Clrn3Q8BHH8 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.17□□□□□ -2.38
Clrn3Q8BHH8 n-R5s94-201ENSMUST00000082573 119 ntBASIC0.17□□□□□ -2.38
Clrn3Q8BHH8 Snord69-201ENSMUST00000104024 80 ntBASIC0.16□□□□□ -2.38
Clrn3Q8BHH8 Gm22021-201ENSMUST00000104353 107 ntBASIC0.16□□□□□ -2.38
Clrn3Q8BHH8 Gm25318-201ENSMUST00000122554 314 ntBASIC0.16□□□□□ -2.38
Clrn3Q8BHH8 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC0.16□□□□□ -2.38
Clrn3Q8BHH8 Mir7093-201ENSMUST00000184195 101 ntBASIC0.16□□□□□ -2.38
Clrn3Q8BHH8 Gm28489-201ENSMUST00000186655 316 ntBASIC0.16□□□□□ -2.38
Clrn3Q8BHH8 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.16□□□□□ -2.38
Clrn3Q8BHH8 Gm16186-201ENSMUST00000120132 216 ntBASIC0.15□□□□□ -2.39
Clrn3Q8BHH8 Gm24629-201ENSMUST00000122762 89 ntBASIC0.15□□□□□ -2.39
Clrn3Q8BHH8 Gm22814-201ENSMUST00000157452 104 ntBASIC0.15□□□□□ -2.39
Clrn3Q8BHH8 Gm25882-201ENSMUST00000157784 85 ntBASIC0.15□□□□□ -2.39
Clrn3Q8BHH8 Gm24192-201ENSMUST00000157978 145 ntBASIC0.15□□□□□ -2.39
Clrn3Q8BHH8 Gm16307-201ENSMUST00000161269 210 ntBASIC0.15□□□□□ -2.39
Clrn3Q8BHH8 Mir8116-201ENSMUST00000184134 97 ntBASIC0.15□□□□□ -2.39
Clrn3Q8BHH8 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.15□□□□□ -2.39
Clrn3Q8BHH8 Gm45673-201ENSMUST00000210293 358 ntBASIC0.15□□□□□ -2.39
Clrn3Q8BHH8 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.15□□□□□ -2.39
Clrn3Q8BHH8 Gm24453-201ENSMUST00000083346 76 ntBASIC0.15□□□□□ -2.39
Clrn3Q8BHH8 Mir224-201ENSMUST00000083608 82 ntBASIC0.15□□□□□ -2.39
Clrn3Q8BHH8 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.14□□□□□ -2.39
Clrn3Q8BHH8 Scarna8-201ENSMUST00000158333 131 ntBASIC0.14□□□□□ -2.39
Clrn3Q8BHH8 Gm24549-201ENSMUST00000158647 139 ntBASIC0.14□□□□□ -2.39
Clrn3Q8BHH8 Gm22466-201ENSMUST00000175278 69 ntBASIC0.14□□□□□ -2.39
Clrn3Q8BHH8 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.14□□□□□ -2.39
Clrn3Q8BHH8 Gm38183-201ENSMUST00000193189 205 ntBASIC0.14□□□□□ -2.39
Clrn3Q8BHH8 AC164297.5-201ENSMUST00000224365 198 ntBASIC0.14□□□□□ -2.39
Clrn3Q8BHH8 Gm24275-201ENSMUST00000116780 146 ntBASIC0.13□□□□□ -2.39
Clrn3Q8BHH8 Gm15002-201ENSMUST00000118406 452 ntBASIC0.13□□□□□ -2.39
Clrn3Q8BHH8 Gm13725-201ENSMUST00000122139 207 ntBASIC0.13□□□□□ -2.39
Clrn3Q8BHH8 Gm24015-201ENSMUST00000157725 232 ntBASIC0.13□□□□□ -2.39
Clrn3Q8BHH8 Gm22553-201ENSMUST00000157797 295 ntBASIC0.13□□□□□ -2.39
Clrn3Q8BHH8 Gm24498-201ENSMUST00000158445 102 ntBASIC0.13□□□□□ -2.39
Clrn3Q8BHH8 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.13□□□□□ -2.39
Clrn3Q8BHH8 Gm25241-201ENSMUST00000174909 84 ntBASIC0.13□□□□□ -2.39
Clrn3Q8BHH8 Gm26217-201ENSMUST00000175212 84 ntBASIC0.13□□□□□ -2.39
Clrn3Q8BHH8 Mir7039-201ENSMUST00000183852 85 ntBASIC0.13□□□□□ -2.39
Clrn3Q8BHH8 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.13□□□□□ -2.39
Clrn3Q8BHH8 AC154296.2-201ENSMUST00000214696 545 ntBASIC0.13□□□□□ -2.39
Clrn3Q8BHH8 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
Clrn3Q8BHH8 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
Clrn3Q8BHH8 Gm25110-201ENSMUST00000116684 121 ntBASIC0.12□□□□□ -2.39
Clrn3Q8BHH8 Gm25775-201ENSMUST00000116716 121 ntBASIC0.12□□□□□ -2.39
Clrn3Q8BHH8 Gm24795-201ENSMUST00000116737 121 ntBASIC0.12□□□□□ -2.39
Clrn3Q8BHH8 Gm26474-201ENSMUST00000116762 122 ntBASIC0.12□□□□□ -2.39
Clrn3Q8BHH8 Gm25171-201ENSMUST00000116926 121 ntBASIC0.12□□□□□ -2.39
Clrn3Q8BHH8 Gm23989-201ENSMUST00000117030 66 ntBASIC0.12□□□□□ -2.39
Clrn3Q8BHH8 Gm23640-201ENSMUST00000157860 104 ntBASIC0.12□□□□□ -2.39
Clrn3Q8BHH8 Gm23838-201ENSMUST00000158067 162 ntBASIC0.12□□□□□ -2.39
Clrn3Q8BHH8 Gm25952-201ENSMUST00000175329 74 ntBASIC0.12□□□□□ -2.39
Clrn3Q8BHH8 Mir7010-201ENSMUST00000183464 63 ntBASIC0.12□□□□□ -2.39
Clrn3Q8BHH8 Gm27997-201ENSMUST00000184942 69 ntBASIC0.12□□□□□ -2.39
Clrn3Q8BHH8 Gm28927-201ENSMUST00000191528 272 ntBASIC0.12□□□□□ -2.39
Clrn3Q8BHH8 Gm44055-201ENSMUST00000204376 247 ntBASIC0.12□□□□□ -2.39
Clrn3Q8BHH8 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.12□□□□□ -2.39
Clrn3Q8BHH8 Snord95-201ENSMUST00000082846 68 ntBASIC0.12□□□□□ -2.39
Clrn3Q8BHH8 Snora19-201ENSMUST00000082962 132 ntBASIC0.12□□□□□ -2.39
Clrn3Q8BHH8 Gm23658-201ENSMUST00000083233 132 ntBASIC0.12□□□□□ -2.39
Clrn3Q8BHH8 Gm25793-201ENSMUST00000083287 107 ntBASIC0.12□□□□□ -2.39
Clrn3Q8BHH8 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.12□□□□□ -2.39
Clrn3Q8BHH8 Mir759-201ENSMUST00000103254 98 ntBASIC0.11□□□□□ -2.39
Clrn3Q8BHH8 Gm24833-201ENSMUST00000116775 120 ntBASIC0.11□□□□□ -2.39
Clrn3Q8BHH8 Mir3108-201ENSMUST00000175500 79 ntBASIC0.11□□□□□ -2.39
Clrn3Q8BHH8 Gm25615-201ENSMUST00000177836 94 ntBASIC0.11□□□□□ -2.39
Clrn3Q8BHH8 Gm43944-201ENSMUST00000205220 120 ntBASIC0.11□□□□□ -2.39
Clrn3Q8BHH8 Gm23845-201ENSMUST00000083834 152 ntBASIC0.11□□□□□ -2.39
Clrn3Q8BHH8 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.11□□□□□ -2.39
Clrn3Q8BHH8 Gm12837-201ENSMUST00000120131 373 ntBASIC0.1□□□□□ -2.39
Clrn3Q8BHH8 Gm22239-201ENSMUST00000175220 103 ntBASIC0.1□□□□□ -2.39
Clrn3Q8BHH8 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC0.1□□□□□ -2.39
Clrn3Q8BHH8 Gm27317-201ENSMUST00000183533 95 ntBASIC0.1□□□□□ -2.39
Clrn3Q8BHH8 Mir7077-201ENSMUST00000183991 57 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms