Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gm45374-201ENSMUST00000211388 136 ntBASIC0.08□□□□□ -2.4
Rpap1Q80TE0 AC166358.7-201ENSMUST00000221132 108 ntBASIC0.08□□□□□ -2.4
Rpap1Q80TE0 AC125543.5-201ENSMUST00000222799 108 ntBASIC0.08□□□□□ -2.4
Rpap1Q80TE0 Gm25078-201ENSMUST00000082530 107 ntBASIC0.08□□□□□ -2.4
Rpap1Q80TE0 Gm25802-201ENSMUST00000082639 77 ntBASIC0.08□□□□□ -2.4
Rpap1Q80TE0 Gm24150-201ENSMUST00000082759 104 ntBASIC0.08□□□□□ -2.4
Rpap1Q80TE0 Gm23492-201ENSMUST00000116837 115 ntBASIC0.07□□□□□ -2.4
Rpap1Q80TE0 Gm15289-201ENSMUST00000117793 244 ntBASIC0.07□□□□□ -2.4
Rpap1Q80TE0 Gm11904-201ENSMUST00000120562 248 ntBASIC0.07□□□□□ -2.4
Rpap1Q80TE0 Cfap61-214ENSMUST00000167179 183 ntBASIC0.07□□□□□ -2.4
Rpap1Q80TE0 Gm25952-201ENSMUST00000175329 74 ntBASIC0.07□□□□□ -2.4
Rpap1Q80TE0 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
Rpap1Q80TE0 Mir376a-201ENSMUST00000197584 68 ntBASIC0.07□□□□□ -2.4
Rpap1Q80TE0 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
Rpap1Q80TE0 Mir30a-201ENSMUST00000083471 71 ntBASIC0.07□□□□□ -2.4
Rpap1Q80TE0 Gm23039-201ENSMUST00000083870 161 ntBASIC0.07□□□□□ -2.4
Rpap1Q80TE0 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.07□□□□□ -2.4
Rpap1Q80TE0 Mir451a-201ENSMUST00000093557 72 ntBASIC0.07□□□□□ -2.4
Rpap1Q80TE0 Gm12225-201ENSMUST00000117995 298 ntBASIC0.06□□□□□ -2.4
Rpap1Q80TE0 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
Rpap1Q80TE0 Gm23101-201ENSMUST00000157550 137 ntBASIC0.06□□□□□ -2.4
Rpap1Q80TE0 Gm23665-201ENSMUST00000158054 62 ntBASIC0.06□□□□□ -2.4
Rpap1Q80TE0 Gm22942-201ENSMUST00000158563 124 ntBASIC0.06□□□□□ -2.4
Rpap1Q80TE0 Gm23194-201ENSMUST00000158813 105 ntBASIC0.06□□□□□ -2.4
Rpap1Q80TE0 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
Rpap1Q80TE0 Gm25671-201ENSMUST00000178612 105 ntBASIC0.06□□□□□ -2.4
Rpap1Q80TE0 Gm23307-201ENSMUST00000179167 105 ntBASIC0.06□□□□□ -2.4
Rpap1Q80TE0 Gm25286-201ENSMUST00000179790 105 ntBASIC0.06□□□□□ -2.4
Rpap1Q80TE0 Gm36946-201ENSMUST00000192706 435 ntBASIC0.06□□□□□ -2.4
Rpap1Q80TE0 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC0.06□□□□□ -2.4
Rpap1Q80TE0 AC098718.2-201ENSMUST00000226822 285 ntBASIC0.06□□□□□ -2.4
Rpap1Q80TE0 Mir382-201ENSMUST00000083494 76 ntBASIC0.06□□□□□ -2.4
Rpap1Q80TE0 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.06□□□□□ -2.4
Rpap1Q80TE0 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
Rpap1Q80TE0 Gm12770-201ENSMUST00000121734 462 ntBASIC0.05□□□□□ -2.4
Rpap1Q80TE0 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.05□□□□□ -2.4
Rpap1Q80TE0 Gm28669-201ENSMUST00000188400 100 ntBASIC0.05□□□□□ -2.4
Rpap1Q80TE0 Gm24256-201ENSMUST00000083696 84 ntBASIC0.05□□□□□ -2.4
Rpap1Q80TE0 Gm22489-201ENSMUST00000116813 62 ntBASIC0.04□□□□□ -2.4
Rpap1Q80TE0 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
Rpap1Q80TE0 Gm16307-201ENSMUST00000161269 210 ntBASIC0.04□□□□□ -2.4
Rpap1Q80TE0 Gm26400-201ENSMUST00000175012 85 ntBASIC0.04□□□□□ -2.4
Rpap1Q80TE0 Mir466m-201ENSMUST00000175052 84 ntBASIC0.04□□□□□ -2.4
Rpap1Q80TE0 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0.04□□□□□ -2.4
Rpap1Q80TE0 Gm26073-201ENSMUST00000179906 127 ntBASIC0.04□□□□□ -2.4
Rpap1Q80TE0 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.04□□□□□ -2.4
Rpap1Q80TE0 Gm38208-201ENSMUST00000192476 114 ntBASIC0.04□□□□□ -2.4
Rpap1Q80TE0 Gm43367-201ENSMUST00000199986 625 ntBASIC0.04□□□□□ -2.4
Rpap1Q80TE0 Gm24527-201ENSMUST00000082920 107 ntBASIC0.04□□□□□ -2.4
Rpap1Q80TE0 Mir411-201ENSMUST00000083543 82 ntBASIC0.04□□□□□ -2.4
Rpap1Q80TE0 Gm22598-201ENSMUST00000157600 127 ntBASIC0.04□□□□□ -2.4
Rpap1Q80TE0 Gm24847-201ENSMUST00000158032 108 ntBASIC0.04□□□□□ -2.4
Rpap1Q80TE0 Gm17528-201ENSMUST00000171026 239 ntBASIC0.04□□□□□ -2.4
Rpap1Q80TE0 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC0.04□□□□□ -2.4
Rpap1Q80TE0 Gm7654-201ENSMUST00000186738 683 ntBASIC0.04□□□□□ -2.4
Rpap1Q80TE0 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC0.04□□□□□ -2.4
Rpap1Q80TE0 Snord49b-201ENSMUST00000082503 72 ntBASIC0.04□□□□□ -2.4
Rpap1Q80TE0 Gm23614-201ENSMUST00000082598 107 ntBASIC0.04□□□□□ -2.4
Rpap1Q80TE0 Snora20-201ENSMUST00000082703 128 ntBASIC0.04□□□□□ -2.4
Rpap1Q80TE0 Snord69-201ENSMUST00000104024 80 ntBASIC0.03□□□□□ -2.41
Rpap1Q80TE0 Gm22199-201ENSMUST00000122660 126 ntBASIC0.03□□□□□ -2.41
Rpap1Q80TE0 Gm22337-201ENSMUST00000157721 132 ntBASIC0.03□□□□□ -2.41
Rpap1Q80TE0 Gm25882-201ENSMUST00000157784 85 ntBASIC0.03□□□□□ -2.41
Rpap1Q80TE0 Gm22520-201ENSMUST00000158269 129 ntBASIC0.03□□□□□ -2.41
Rpap1Q80TE0 Gm24500-201ENSMUST00000158447 124 ntBASIC0.03□□□□□ -2.41
Rpap1Q80TE0 Gm24810-201ENSMUST00000175317 70 ntBASIC0.03□□□□□ -2.41
Rpap1Q80TE0 Gm28330-201ENSMUST00000190353 171 ntBASIC0.03□□□□□ -2.41
Rpap1Q80TE0 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.03□□□□□ -2.41
Rpap1Q80TE0 Mirlet7d-201ENSMUST00000083519 103 ntBASIC0.03□□□□□ -2.41
Rpap1Q80TE0 Gm24393-201ENSMUST00000158135 97 ntBASIC0.02□□□□□ -2.41
Rpap1Q80TE0 Gm24499-201ENSMUST00000158446 104 ntBASIC0.02□□□□□ -2.41
Rpap1Q80TE0 Gm27539-201ENSMUST00000184971 224 ntBASIC0.02□□□□□ -2.41
Rpap1Q80TE0 Gm6003-201ENSMUST00000187903 463 ntBASIC0.02□□□□□ -2.41
Rpap1Q80TE0 Mir465d-201ENSMUST00000196314 58 ntBASIC0.02□□□□□ -2.41
Rpap1Q80TE0 AC116589.4-201ENSMUST00000222390 216 ntBASIC0.02□□□□□ -2.41
Rpap1Q80TE0 Gm24035-201ENSMUST00000082867 107 ntBASIC0.02□□□□□ -2.41
Rpap1Q80TE0 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.01□□□□□ -2.41
Rpap1Q80TE0 Mir547-201ENSMUST00000102051 78 ntBASIC0.01□□□□□ -2.41
Rpap1Q80TE0 Gm14574-201ENSMUST00000120644 279 ntBASIC0.01□□□□□ -2.41
Rpap1Q80TE0 Gm24549-201ENSMUST00000158647 139 ntBASIC0.01□□□□□ -2.41
Rpap1Q80TE0 Gm23474-201ENSMUST00000158884 75 ntBASIC0.01□□□□□ -2.41
Rpap1Q80TE0 Gm25300-201ENSMUST00000175284 84 ntBASIC0.01□□□□□ -2.41
Rpap1Q80TE0 Gm44457-201ENSMUST00000198109 76 ntBASIC0.01□□□□□ -2.41
Rpap1Q80TE0 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.01□□□□□ -2.41
Rpap1Q80TE0 Gm19572-201ENSMUST00000214326 338 ntBASIC0.01□□□□□ -2.41
Rpap1Q80TE0 Snord82-201ENSMUST00000082889 70 ntBASIC0.01□□□□□ -2.41
Rpap1Q80TE0 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Rpap1Q80TE0 Gm25414-201ENSMUST00000101814 107 ntBASIC0□□□□□ -2.41
Rpap1Q80TE0 Mir672-201ENSMUST00000102331 100 ntBASIC0□□□□□ -2.41
Rpap1Q80TE0 Gm26090-201ENSMUST00000157897 128 ntBASIC0□□□□□ -2.41
Rpap1Q80TE0 Gm23821-201ENSMUST00000158738 106 ntBASIC0□□□□□ -2.41
Rpap1Q80TE0 Gm3702-201ENSMUST00000211754 346 ntBASIC0□□□□□ -2.41
Rpap1Q80TE0 AC125311.1-201ENSMUST00000226950 220 ntBASIC0□□□□□ -2.41
Rpap1Q80TE0 Gm25814-201ENSMUST00000082754 107 ntBASIC0□□□□□ -2.41
Rpap1Q80TE0 Gm26056-201ENSMUST00000083043 104 ntBASIC0□□□□□ -2.41
Rpap1Q80TE0 Gm23989-201ENSMUST00000117030 66 ntBASIC-0.01□□□□□ -2.41
Rpap1Q80TE0 AC160984.1-201ENSMUST00000225855 3154 ntBASIC-0.01□□□□□ -2.41
Rpap1Q80TE0 Gm25611-201ENSMUST00000104017 133 ntBASIC-0.02□□□□□ -2.41
Rpap1Q80TE0 Gm24504-201ENSMUST00000157679 100 ntBASIC-0.02□□□□□ -2.41
Rpap1Q80TE0 Gm23763-201ENSMUST00000158345 60 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms