Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.7□□□□□ -2.14
Ubfd1Q78JW9 Snord14a-201ENSMUST00000082807 87 ntBASIC1.7□□□□□ -2.14
Ubfd1Q78JW9 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Ubfd1Q78JW9 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.69□□□□□ -2.14
Ubfd1Q78JW9 Mir3096-201ENSMUST00000116685 71 ntBASIC1.69□□□□□ -2.14
Ubfd1Q78JW9 Gm22888-201ENSMUST00000158640 77 ntBASIC1.69□□□□□ -2.14
Ubfd1Q78JW9 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.69□□□□□ -2.14
Ubfd1Q78JW9 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Ubfd1Q78JW9 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.69□□□□□ -2.14
Ubfd1Q78JW9 Gm29603-201ENSMUST00000186792 334 ntBASIC1.69□□□□□ -2.14
Ubfd1Q78JW9 Gm42855-201ENSMUST00000197388 253 ntBASIC1.69□□□□□ -2.14
Ubfd1Q78JW9 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.69□□□□□ -2.14
Ubfd1Q78JW9 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.69□□□□□ -2.14
Ubfd1Q78JW9 Gm22761-201ENSMUST00000102278 96 ntBASIC1.68□□□□□ -2.14
Ubfd1Q78JW9 Gm22148-201ENSMUST00000104445 107 ntBASIC1.68□□□□□ -2.14
Ubfd1Q78JW9 Gm14671-201ENSMUST00000121790 262 ntBASIC1.68□□□□□ -2.14
Ubfd1Q78JW9 Gm25279-201ENSMUST00000122608 133 ntBASIC1.68□□□□□ -2.14
Ubfd1Q78JW9 Gm22665-201ENSMUST00000158720 275 ntBASIC1.68□□□□□ -2.14
Ubfd1Q78JW9 Gm27672-201ENSMUST00000183751 204 ntBASIC1.68□□□□□ -2.14
Ubfd1Q78JW9 Mir8116-201ENSMUST00000184134 97 ntBASIC1.68□□□□□ -2.14
Ubfd1Q78JW9 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.68□□□□□ -2.14
Ubfd1Q78JW9 Gm5002-201ENSMUST00000207145 223 ntBASIC1.68□□□□□ -2.14
Ubfd1Q78JW9 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.68□□□□□ -2.14
Ubfd1Q78JW9 Gm22884-201ENSMUST00000083127 140 ntBASIC1.68□□□□□ -2.14
Ubfd1Q78JW9 Mir301b-201ENSMUST00000102333 97 ntBASIC1.67□□□□□ -2.14
Ubfd1Q78JW9 Snord100-201ENSMUST00000116836 74 ntBASIC1.67□□□□□ -2.14
Ubfd1Q78JW9 Gm11856-201ENSMUST00000118712 276 ntBASIC1.67□□□□□ -2.14
Ubfd1Q78JW9 Gm11334-201ENSMUST00000121969 156 ntBASIC1.67□□□□□ -2.14
Ubfd1Q78JW9 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.67□□□□□ -2.14
Ubfd1Q78JW9 Gm22477-201ENSMUST00000122569 316 ntBASIC1.67□□□□□ -2.14
Ubfd1Q78JW9 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Ubfd1Q78JW9 Gm22850-201ENSMUST00000157714 82 ntBASIC1.67□□□□□ -2.14
Ubfd1Q78JW9 Gm24076-201ENSMUST00000158179 94 ntBASIC1.67□□□□□ -2.14
Ubfd1Q78JW9 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.67□□□□□ -2.14
Ubfd1Q78JW9 Mir3087-201ENSMUST00000199405 56 ntBASIC1.67□□□□□ -2.14
Ubfd1Q78JW9 Mir148b-201ENSMUST00000083626 97 ntBASIC1.67□□□□□ -2.14
Ubfd1Q78JW9 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.66□□□□□ -2.14
Ubfd1Q78JW9 Gm25878-201ENSMUST00000104327 93 ntBASIC1.66□□□□□ -2.14
Ubfd1Q78JW9 Gm24559-201ENSMUST00000157519 121 ntBASIC1.66□□□□□ -2.14
Ubfd1Q78JW9 Gm24000-201ENSMUST00000158063 89 ntBASIC1.66□□□□□ -2.14
Ubfd1Q78JW9 Gm16404-201ENSMUST00000177739 468 ntBASIC1.66□□□□□ -2.14
Ubfd1Q78JW9 Gm24638-201ENSMUST00000179807 132 ntBASIC1.66□□□□□ -2.14
Ubfd1Q78JW9 Gm14598-201ENSMUST00000180109 468 ntBASIC1.66□□□□□ -2.14
Ubfd1Q78JW9 Gm14625-201ENSMUST00000180231 468 ntBASIC1.66□□□□□ -2.14
Ubfd1Q78JW9 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
Ubfd1Q78JW9 Gm23988-201ENSMUST00000117034 122 ntBASIC1.65□□□□□ -2.15
Ubfd1Q78JW9 Gm14709-201ENSMUST00000121225 304 ntBASIC1.65□□□□□ -2.15
Ubfd1Q78JW9 Gm23996-201ENSMUST00000158062 131 ntBASIC1.65□□□□□ -2.15
Ubfd1Q78JW9 Gm2077-201ENSMUST00000195017 319 ntBASIC1.65□□□□□ -2.15
Ubfd1Q78JW9 Gm44464-201ENSMUST00000198010 138 ntBASIC1.65□□□□□ -2.15
Ubfd1Q78JW9 Gm44922-201ENSMUST00000206690 90 ntBASIC1.65□□□□□ -2.15
Ubfd1Q78JW9 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.65□□□□□ -2.15
Ubfd1Q78JW9 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.65□□□□□ -2.15
Ubfd1Q78JW9 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Ubfd1Q78JW9 Mir880-201ENSMUST00000104809 78 ntBASIC1.64□□□□□ -2.15
Ubfd1Q78JW9 Gm13922-201ENSMUST00000119505 156 ntBASIC1.64□□□□□ -2.15
Ubfd1Q78JW9 Gm22082-201ENSMUST00000157587 161 ntBASIC1.64□□□□□ -2.15
Ubfd1Q78JW9 Gm26415-201ENSMUST00000157673 292 ntBASIC1.64□□□□□ -2.15
Ubfd1Q78JW9 Mir5104-201ENSMUST00000175319 94 ntBASIC1.64□□□□□ -2.15
Ubfd1Q78JW9 Mir466b-1-201ENSMUST00000177988 82 ntBASIC1.64□□□□□ -2.15
Ubfd1Q78JW9 Gm44322-201ENSMUST00000196830 115 ntBASIC1.64□□□□□ -2.15
Ubfd1Q78JW9 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.64□□□□□ -2.15
Ubfd1Q78JW9 Gm45544-201ENSMUST00000211130 88 ntBASIC1.64□□□□□ -2.15
Ubfd1Q78JW9 AC192091.2-201ENSMUST00000217869 117 ntBASIC1.64□□□□□ -2.15
Ubfd1Q78JW9 Gm25855-201ENSMUST00000082787 72 ntBASIC1.64□□□□□ -2.15
Ubfd1Q78JW9 Gm25038-201ENSMUST00000082928 130 ntBASIC1.64□□□□□ -2.15
Ubfd1Q78JW9 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.64□□□□□ -2.15
Ubfd1Q78JW9 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Ubfd1Q78JW9 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Ubfd1Q78JW9 Gm26074-201ENSMUST00000104063 129 ntBASIC1.63□□□□□ -2.15
Ubfd1Q78JW9 Gm14567-201ENSMUST00000117155 174 ntBASIC1.63□□□□□ -2.15
Ubfd1Q78JW9 Gm26213-201ENSMUST00000158582 110 ntBASIC1.63□□□□□ -2.15
Ubfd1Q78JW9 Gm24345-201ENSMUST00000158706 124 ntBASIC1.63□□□□□ -2.15
Ubfd1Q78JW9 Gm26360-201ENSMUST00000158872 103 ntBASIC1.63□□□□□ -2.15
Ubfd1Q78JW9 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC1.63□□□□□ -2.15
Ubfd1Q78JW9 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.63□□□□□ -2.15
Ubfd1Q78JW9 Gm25409-201ENSMUST00000083764 131 ntBASIC1.63□□□□□ -2.15
Ubfd1Q78JW9 Gm21940-201ENSMUST00000204940 2278 ntBASIC1.63□□□□□ -2.15
Ubfd1Q78JW9 Mir544-201ENSMUST00000103813 78 ntBASIC1.62□□□□□ -2.15
Ubfd1Q78JW9 Gm11792-201ENSMUST00000120640 168 ntBASIC1.62□□□□□ -2.15
Ubfd1Q78JW9 Gm22387-201ENSMUST00000158191 131 ntBASIC1.62□□□□□ -2.15
Ubfd1Q78JW9 Gm22606-201ENSMUST00000158290 103 ntBASIC1.62□□□□□ -2.15
Ubfd1Q78JW9 Gm24677-201ENSMUST00000158755 150 ntBASIC1.62□□□□□ -2.15
Ubfd1Q78JW9 Mir3061-201ENSMUST00000175129 91 ntBASIC1.62□□□□□ -2.15
Ubfd1Q78JW9 Mir7675-201ENSMUST00000184262 58 ntBASIC1.62□□□□□ -2.15
Ubfd1Q78JW9 Gm45754-201ENSMUST00000212380 279 ntBASIC1.62□□□□□ -2.15
Ubfd1Q78JW9 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.62□□□□□ -2.15
Ubfd1Q78JW9 Gm24523-201ENSMUST00000083965 132 ntBASIC1.62□□□□□ -2.15
Ubfd1Q78JW9 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Ubfd1Q78JW9 Gm24262-201ENSMUST00000157431 144 ntBASIC1.61□□□□□ -2.15
Ubfd1Q78JW9 Gm22403-201ENSMUST00000174919 84 ntBASIC1.61□□□□□ -2.15
Ubfd1Q78JW9 Gm26073-201ENSMUST00000179906 127 ntBASIC1.61□□□□□ -2.15
Ubfd1Q78JW9 Gm27699-201ENSMUST00000183553 180 ntBASIC1.61□□□□□ -2.15
Ubfd1Q78JW9 Gm28383-201ENSMUST00000187563 139 ntBASIC1.61□□□□□ -2.15
Ubfd1Q78JW9 Gm22283-201ENSMUST00000082556 161 ntBASIC1.61□□□□□ -2.15
Ubfd1Q78JW9 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.61□□□□□ -2.15
Ubfd1Q78JW9 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.6□□□□□ -2.15
Ubfd1Q78JW9 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.6□□□□□ -2.15
Ubfd1Q78JW9 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Ubfd1Q78JW9 Mir873a-201ENSMUST00000104863 77 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 137.9 ms