Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Snord19-201ENSMUST00000104609 76 ntBASIC1.62□□□□□ -2.15
Ddx58Q6Q899 Gm23258-201ENSMUST00000158319 106 ntBASIC1.62□□□□□ -2.15
Ddx58Q6Q899 Gm22802-201ENSMUST00000175621 89 ntBASIC1.62□□□□□ -2.15
Ddx58Q6Q899 Mir6350-201ENSMUST00000183639 105 ntBASIC1.62□□□□□ -2.15
Ddx58Q6Q899 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.62□□□□□ -2.15
Ddx58Q6Q899 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
Ddx58Q6Q899 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Ddx58Q6Q899 Gm22785-201ENSMUST00000104087 132 ntBASIC1.61□□□□□ -2.15
Ddx58Q6Q899 Gm12309-201ENSMUST00000119889 182 ntBASIC1.61□□□□□ -2.15
Ddx58Q6Q899 Gm24379-201ENSMUST00000122695 86 ntBASIC1.61□□□□□ -2.15
Ddx58Q6Q899 Gm24915-201ENSMUST00000157288 78 ntBASIC1.61□□□□□ -2.15
Ddx58Q6Q899 Gm25663-201ENSMUST00000157698 135 ntBASIC1.61□□□□□ -2.15
Ddx58Q6Q899 Traj60-201ENSMUST00000167781 54 ntBASIC1.61□□□□□ -2.15
Ddx58Q6Q899 Mir7063-201ENSMUST00000184158 91 ntBASIC1.61□□□□□ -2.15
Ddx58Q6Q899 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Ddx58Q6Q899 Gm29603-201ENSMUST00000186792 334 ntBASIC1.61□□□□□ -2.15
Ddx58Q6Q899 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.61□□□□□ -2.15
Ddx58Q6Q899 Gm22744-201ENSMUST00000083444 65 ntBASIC1.61□□□□□ -2.15
Ddx58Q6Q899 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.6□□□□□ -2.15
Ddx58Q6Q899 Gm25759-201ENSMUST00000103988 129 ntBASIC1.6□□□□□ -2.15
Ddx58Q6Q899 Gm23106-201ENSMUST00000157554 101 ntBASIC1.6□□□□□ -2.15
Ddx58Q6Q899 Snord13-201ENSMUST00000157627 104 ntBASIC1.6□□□□□ -2.15
Ddx58Q6Q899 Gm25267-201ENSMUST00000158522 63 ntBASIC1.6□□□□□ -2.15
Ddx58Q6Q899 Gm26213-201ENSMUST00000158582 110 ntBASIC1.6□□□□□ -2.15
Ddx58Q6Q899 Gm22888-201ENSMUST00000158640 77 ntBASIC1.6□□□□□ -2.15
Ddx58Q6Q899 Gm27476-201ENSMUST00000183366 104 ntBASIC1.6□□□□□ -2.15
Ddx58Q6Q899 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.6□□□□□ -2.15
Ddx58Q6Q899 Gm26082-201ENSMUST00000104070 127 ntBASIC1.59□□□□□ -2.15
Ddx58Q6Q899 Gm23907-201ENSMUST00000104595 189 ntBASIC1.59□□□□□ -2.15
Ddx58Q6Q899 Mir880-201ENSMUST00000104809 78 ntBASIC1.59□□□□□ -2.15
Ddx58Q6Q899 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.59□□□□□ -2.15
Ddx58Q6Q899 Gm25783-201ENSMUST00000122525 190 ntBASIC1.59□□□□□ -2.15
Ddx58Q6Q899 Gm23083-201ENSMUST00000157851 116 ntBASIC1.59□□□□□ -2.15
Ddx58Q6Q899 Gm22862-201ENSMUST00000178593 121 ntBASIC1.59□□□□□ -2.15
Ddx58Q6Q899 Gm27894-201ENSMUST00000184177 92 ntBASIC1.59□□□□□ -2.15
Ddx58Q6Q899 Gm24867-201ENSMUST00000104161 107 ntBASIC1.58□□□□□ -2.16
Ddx58Q6Q899 Gm26293-201ENSMUST00000104170 84 ntBASIC1.58□□□□□ -2.16
Ddx58Q6Q899 Gm25495-201ENSMUST00000104431 131 ntBASIC1.58□□□□□ -2.16
Ddx58Q6Q899 Gm15069-201ENSMUST00000117792 192 ntBASIC1.58□□□□□ -2.16
Ddx58Q6Q899 Gm14923-201ENSMUST00000118270 155 ntBASIC1.58□□□□□ -2.16
Ddx58Q6Q899 Gm15068-201ENSMUST00000119796 192 ntBASIC1.58□□□□□ -2.16
Ddx58Q6Q899 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.58□□□□□ -2.16
Ddx58Q6Q899 Gm14671-201ENSMUST00000121790 262 ntBASIC1.58□□□□□ -2.16
Ddx58Q6Q899 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.58□□□□□ -2.16
Ddx58Q6Q899 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.58□□□□□ -2.16
Ddx58Q6Q899 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Ddx58Q6Q899 Gm22780-201ENSMUST00000104084 132 ntBASIC1.57□□□□□ -2.16
Ddx58Q6Q899 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.57□□□□□ -2.16
Ddx58Q6Q899 Gm26279-201ENSMUST00000157095 102 ntBASIC1.57□□□□□ -2.16
Ddx58Q6Q899 Gm23996-201ENSMUST00000158062 131 ntBASIC1.57□□□□□ -2.16
Ddx58Q6Q899 Gm24000-201ENSMUST00000158063 89 ntBASIC1.57□□□□□ -2.16
Ddx58Q6Q899 Gm26029-201ENSMUST00000158659 132 ntBASIC1.57□□□□□ -2.16
Ddx58Q6Q899 Gm44921-201ENSMUST00000205290 301 ntBASIC1.57□□□□□ -2.16
Ddx58Q6Q899 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.57□□□□□ -2.16
Ddx58Q6Q899 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC1.57□□□□□ -2.16
Ddx58Q6Q899 Snord82-201ENSMUST00000082889 70 ntBASIC1.57□□□□□ -2.16
Ddx58Q6Q899 Mir211-201ENSMUST00000083651 106 ntBASIC1.57□□□□□ -2.16
Ddx58Q6Q899 Gm24252-201ENSMUST00000083700 132 ntBASIC1.57□□□□□ -2.16
Ddx58Q6Q899 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
Ddx58Q6Q899 Gm24171-201ENSMUST00000104126 131 ntBASIC1.56□□□□□ -2.16
Ddx58Q6Q899 Gm14838-201ENSMUST00000118913 248 ntBASIC1.56□□□□□ -2.16
Ddx58Q6Q899 Gm20391-201ENSMUST00000174722 106 ntBASIC1.56□□□□□ -2.16
Ddx58Q6Q899 Mir3968-201ENSMUST00000175355 100 ntBASIC1.56□□□□□ -2.16
Ddx58Q6Q899 Gm26426-201ENSMUST00000177866 123 ntBASIC1.56□□□□□ -2.16
Ddx58Q6Q899 Gm26060-201ENSMUST00000180094 123 ntBASIC1.56□□□□□ -2.16
Ddx58Q6Q899 Gm25855-201ENSMUST00000082787 72 ntBASIC1.56□□□□□ -2.16
Ddx58Q6Q899 Gm24762-201ENSMUST00000083689 104 ntBASIC1.56□□□□□ -2.16
Ddx58Q6Q899 Gm25409-201ENSMUST00000083764 131 ntBASIC1.56□□□□□ -2.16
Ddx58Q6Q899 Gm25650-201ENSMUST00000083784 162 ntBASIC1.56□□□□□ -2.16
Ddx58Q6Q899 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Ddx58Q6Q899 Gm13246-201ENSMUST00000120994 315 ntBASIC1.55□□□□□ -2.16
Ddx58Q6Q899 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.55□□□□□ -2.16
Ddx58Q6Q899 Gm25390-201ENSMUST00000157341 103 ntBASIC1.55□□□□□ -2.16
Ddx58Q6Q899 Gm25494-201ENSMUST00000158143 100 ntBASIC1.55□□□□□ -2.16
Ddx58Q6Q899 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.55□□□□□ -2.16
Ddx58Q6Q899 Gm6003-201ENSMUST00000187903 463 ntBASIC1.55□□□□□ -2.16
Ddx58Q6Q899 Gm44483-201ENSMUST00000197203 97 ntBASIC1.55□□□□□ -2.16
Ddx58Q6Q899 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.55□□□□□ -2.16
Ddx58Q6Q899 Mir466p-201ENSMUST00000103925 89 ntBASIC1.54□□□□□ -2.16
Ddx58Q6Q899 n-R5s87-201ENSMUST00000122752 116 ntBASIC1.54□□□□□ -2.16
Ddx58Q6Q899 Gm22387-201ENSMUST00000158191 131 ntBASIC1.54□□□□□ -2.16
Ddx58Q6Q899 Gm23636-201ENSMUST00000175070 95 ntBASIC1.54□□□□□ -2.16
Ddx58Q6Q899 Gm27711-201ENSMUST00000183802 118 ntBASIC1.54□□□□□ -2.16
Ddx58Q6Q899 Gm24929-201ENSMUST00000083403 139 ntBASIC1.54□□□□□ -2.16
Ddx58Q6Q899 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.54□□□□□ -2.16
Ddx58Q6Q899 Gm25878-201ENSMUST00000104327 93 ntBASIC1.53□□□□□ -2.16
Ddx58Q6Q899 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Ddx58Q6Q899 Gm24588-201ENSMUST00000116696 83 ntBASIC1.53□□□□□ -2.16
Ddx58Q6Q899 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.53□□□□□ -2.16
Ddx58Q6Q899 Gm25323-201ENSMUST00000122555 103 ntBASIC1.53□□□□□ -2.16
Ddx58Q6Q899 Gm24154-201ENSMUST00000175261 130 ntBASIC1.53□□□□□ -2.16
Ddx58Q6Q899 Gm16399-201ENSMUST00000181423 219 ntBASIC1.53□□□□□ -2.16
Ddx58Q6Q899 Gm28862-201ENSMUST00000188246 163 ntBASIC1.53□□□□□ -2.16
Ddx58Q6Q899 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Ddx58Q6Q899 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Ddx58Q6Q899 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Ddx58Q6Q899 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.52□□□□□ -2.17
Ddx58Q6Q899 Gm22559-201ENSMUST00000157329 134 ntBASIC1.52□□□□□ -2.17
Ddx58Q6Q899 Gm25895-201ENSMUST00000083714 100 ntBASIC1.52□□□□□ -2.17
Ddx58Q6Q899 Gm26074-201ENSMUST00000104063 129 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms