Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.52□□□□□ -2.17
Smarca1Q6PGB8 Mir343-201ENSMUST00000102360 75 ntBASIC1.51□□□□□ -2.17
Smarca1Q6PGB8 Snord19-201ENSMUST00000104609 76 ntBASIC1.51□□□□□ -2.17
Smarca1Q6PGB8 Gm23655-201ENSMUST00000122627 105 ntBASIC1.51□□□□□ -2.17
Smarca1Q6PGB8 Gm25558-201ENSMUST00000158083 106 ntBASIC1.51□□□□□ -2.17
Smarca1Q6PGB8 Gm25015-201ENSMUST00000158400 128 ntBASIC1.51□□□□□ -2.17
Smarca1Q6PGB8 Gm27476-201ENSMUST00000183366 104 ntBASIC1.51□□□□□ -2.17
Smarca1Q6PGB8 Mir7039-201ENSMUST00000183852 85 ntBASIC1.51□□□□□ -2.17
Smarca1Q6PGB8 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.51□□□□□ -2.17
Smarca1Q6PGB8 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.51□□□□□ -2.17
Smarca1Q6PGB8 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.51□□□□□ -2.17
Smarca1Q6PGB8 Mir880-201ENSMUST00000104809 78 ntBASIC1.5□□□□□ -2.17
Smarca1Q6PGB8 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC1.5□□□□□ -2.17
Smarca1Q6PGB8 Gm24154-201ENSMUST00000175261 130 ntBASIC1.5□□□□□ -2.17
Smarca1Q6PGB8 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Smarca1Q6PGB8 Mir7052-201ENSMUST00000184821 65 ntBASIC1.5□□□□□ -2.17
Smarca1Q6PGB8 Gm28344-201ENSMUST00000185704 279 ntBASIC1.5□□□□□ -2.17
Smarca1Q6PGB8 Gm43199-201ENSMUST00000200019 307 ntBASIC1.5□□□□□ -2.17
Smarca1Q6PGB8 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.5□□□□□ -2.17
Smarca1Q6PGB8 Gm23423-201ENSMUST00000082782 106 ntBASIC1.5□□□□□ -2.17
Smarca1Q6PGB8 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Smarca1Q6PGB8 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Smarca1Q6PGB8 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.49□□□□□ -2.17
Smarca1Q6PGB8 Gm25315-201ENSMUST00000116823 121 ntBASIC1.49□□□□□ -2.17
Smarca1Q6PGB8 Gm11792-201ENSMUST00000120640 168 ntBASIC1.49□□□□□ -2.17
Smarca1Q6PGB8 Mir6350-201ENSMUST00000183639 105 ntBASIC1.49□□□□□ -2.17
Smarca1Q6PGB8 Gm24624-201ENSMUST00000082617 164 ntBASIC1.49□□□□□ -2.17
Smarca1Q6PGB8 Gm23299-201ENSMUST00000082708 79 ntBASIC1.49□□□□□ -2.17
Smarca1Q6PGB8 Gm24867-201ENSMUST00000104161 107 ntBASIC1.48□□□□□ -2.17
Smarca1Q6PGB8 Gm25267-201ENSMUST00000158522 63 ntBASIC1.48□□□□□ -2.17
Smarca1Q6PGB8 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.48□□□□□ -2.17
Smarca1Q6PGB8 Gm23141-201ENSMUST00000178682 94 ntBASIC1.48□□□□□ -2.17
Smarca1Q6PGB8 AC154390.1-201ENSMUST00000225629 277 ntBASIC1.48□□□□□ -2.17
Smarca1Q6PGB8 Gm22686-201ENSMUST00000082847 100 ntBASIC1.48□□□□□ -2.17
Smarca1Q6PGB8 Gm24522-201ENSMUST00000083964 108 ntBASIC1.48□□□□□ -2.17
Smarca1Q6PGB8 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Smarca1Q6PGB8 Gm25992-201ENSMUST00000102437 109 ntBASIC1.47□□□□□ -2.17
Smarca1Q6PGB8 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC1.47□□□□□ -2.17
Smarca1Q6PGB8 Gm23329-201ENSMUST00000157415 108 ntBASIC1.47□□□□□ -2.17
Smarca1Q6PGB8 Gm23106-201ENSMUST00000157554 101 ntBASIC1.47□□□□□ -2.17
Smarca1Q6PGB8 Gm22767-201ENSMUST00000158365 165 ntBASIC1.47□□□□□ -2.17
Smarca1Q6PGB8 Gm23339-201ENSMUST00000158962 139 ntBASIC1.47□□□□□ -2.17
Smarca1Q6PGB8 Gm16399-201ENSMUST00000181423 219 ntBASIC1.47□□□□□ -2.17
Smarca1Q6PGB8 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.47□□□□□ -2.17
Smarca1Q6PGB8 Gm22704-201ENSMUST00000083027 137 ntBASIC1.47□□□□□ -2.17
Smarca1Q6PGB8 Gm24171-201ENSMUST00000104126 131 ntBASIC1.46□□□□□ -2.18
Smarca1Q6PGB8 Gm25495-201ENSMUST00000104431 131 ntBASIC1.46□□□□□ -2.18
Smarca1Q6PGB8 Gm23907-201ENSMUST00000104595 189 ntBASIC1.46□□□□□ -2.18
Smarca1Q6PGB8 Gm24588-201ENSMUST00000116696 83 ntBASIC1.46□□□□□ -2.18
Smarca1Q6PGB8 Gm25663-201ENSMUST00000157698 135 ntBASIC1.46□□□□□ -2.18
Smarca1Q6PGB8 Gm24000-201ENSMUST00000158063 89 ntBASIC1.46□□□□□ -2.18
Smarca1Q6PGB8 Gm23545-201ENSMUST00000158205 104 ntBASIC1.46□□□□□ -2.18
Smarca1Q6PGB8 Gm44921-201ENSMUST00000205290 301 ntBASIC1.46□□□□□ -2.18
Smarca1Q6PGB8 Gm25855-201ENSMUST00000082787 72 ntBASIC1.46□□□□□ -2.18
Smarca1Q6PGB8 Gm25274-201ENSMUST00000104296 135 ntBASIC1.45□□□□□ -2.18
Smarca1Q6PGB8 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.45□□□□□ -2.18
Smarca1Q6PGB8 Snord13-201ENSMUST00000157627 104 ntBASIC1.45□□□□□ -2.18
Smarca1Q6PGB8 Gm25223-201ENSMUST00000158200 110 ntBASIC1.45□□□□□ -2.18
Smarca1Q6PGB8 Gm23760-201ENSMUST00000158350 116 ntBASIC1.45□□□□□ -2.18
Smarca1Q6PGB8 Gm24634-201ENSMUST00000158672 107 ntBASIC1.45□□□□□ -2.18
Smarca1Q6PGB8 Gm25976-201ENSMUST00000158695 130 ntBASIC1.45□□□□□ -2.18
Smarca1Q6PGB8 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.45□□□□□ -2.18
Smarca1Q6PGB8 Gm27668-201ENSMUST00000184188 120 ntBASIC1.45□□□□□ -2.18
Smarca1Q6PGB8 Gm6003-201ENSMUST00000187903 463 ntBASIC1.45□□□□□ -2.18
Smarca1Q6PGB8 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Smarca1Q6PGB8 Gm11857-201ENSMUST00000119817 324 ntBASIC1.44□□□□□ -2.18
Smarca1Q6PGB8 Gm12309-201ENSMUST00000119889 182 ntBASIC1.44□□□□□ -2.18
Smarca1Q6PGB8 Gm23584-201ENSMUST00000157655 129 ntBASIC1.44□□□□□ -2.18
Smarca1Q6PGB8 Gm20391-201ENSMUST00000174722 106 ntBASIC1.44□□□□□ -2.18
Smarca1Q6PGB8 Gm22862-201ENSMUST00000178593 121 ntBASIC1.44□□□□□ -2.18
Smarca1Q6PGB8 Gm45544-201ENSMUST00000211130 88 ntBASIC1.44□□□□□ -2.18
Smarca1Q6PGB8 Mir448-201ENSMUST00000083516 112 ntBASIC1.44□□□□□ -2.18
Smarca1Q6PGB8 Gm22003-201ENSMUST00000101885 107 ntBASIC1.43□□□□□ -2.18
Smarca1Q6PGB8 Gm25170-201ENSMUST00000104191 129 ntBASIC1.43□□□□□ -2.18
Smarca1Q6PGB8 Gm26301-201ENSMUST00000104813 95 ntBASIC1.43□□□□□ -2.18
Smarca1Q6PGB8 Gm13246-201ENSMUST00000120994 315 ntBASIC1.43□□□□□ -2.18
Smarca1Q6PGB8 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.43□□□□□ -2.18
Smarca1Q6PGB8 Gm23328-201ENSMUST00000157418 132 ntBASIC1.43□□□□□ -2.18
Smarca1Q6PGB8 Gm25654-201ENSMUST00000158467 88 ntBASIC1.43□□□□□ -2.18
Smarca1Q6PGB8 Gm24345-201ENSMUST00000158706 124 ntBASIC1.43□□□□□ -2.18
Smarca1Q6PGB8 Gm25069-201ENSMUST00000175238 86 ntBASIC1.43□□□□□ -2.18
Smarca1Q6PGB8 Gm22802-201ENSMUST00000175621 89 ntBASIC1.43□□□□□ -2.18
Smarca1Q6PGB8 Gm22129-201ENSMUST00000179034 107 ntBASIC1.43□□□□□ -2.18
Smarca1Q6PGB8 Gm23410-201ENSMUST00000179967 107 ntBASIC1.43□□□□□ -2.18
Smarca1Q6PGB8 Gm22756-201ENSMUST00000180118 107 ntBASIC1.43□□□□□ -2.18
Smarca1Q6PGB8 Gm22505-201ENSMUST00000082956 108 ntBASIC1.43□□□□□ -2.18
Smarca1Q6PGB8 Gm22363-201ENSMUST00000083100 108 ntBASIC1.43□□□□□ -2.18
Smarca1Q6PGB8 Gm23814-201ENSMUST00000083230 102 ntBASIC1.43□□□□□ -2.18
Smarca1Q6PGB8 Gm24929-201ENSMUST00000083403 139 ntBASIC1.43□□□□□ -2.18
Smarca1Q6PGB8 Gm23095-201ENSMUST00000083446 107 ntBASIC1.43□□□□□ -2.18
Smarca1Q6PGB8 Gm26279-201ENSMUST00000157095 102 ntBASIC1.42□□□□□ -2.18
Smarca1Q6PGB8 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC1.42□□□□□ -2.18
Smarca1Q6PGB8 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.42□□□□□ -2.18
Smarca1Q6PGB8 Gm25650-201ENSMUST00000083784 162 ntBASIC1.42□□□□□ -2.18
Smarca1Q6PGB8 Gm26074-201ENSMUST00000104063 129 ntBASIC1.41□□□□□ -2.18
Smarca1Q6PGB8 Gm22780-201ENSMUST00000104084 132 ntBASIC1.41□□□□□ -2.18
Smarca1Q6PGB8 Gm25878-201ENSMUST00000104327 93 ntBASIC1.41□□□□□ -2.18
Smarca1Q6PGB8 Gm15069-201ENSMUST00000117792 192 ntBASIC1.41□□□□□ -2.18
Smarca1Q6PGB8 Gm15068-201ENSMUST00000119796 192 ntBASIC1.41□□□□□ -2.18
Smarca1Q6PGB8 Gm23083-201ENSMUST00000157851 116 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 208.4 ms