Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.32□□□□□ -2.2
Snrnp40Q6PE01 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.32□□□□□ -2.2
Snrnp40Q6PE01 Snord82-201ENSMUST00000082889 70 ntBASIC1.32□□□□□ -2.2
Snrnp40Q6PE01 Gm25697-201ENSMUST00000082902 98 ntBASIC1.32□□□□□ -2.2
Snrnp40Q6PE01 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.32□□□□□ -2.2
Snrnp40Q6PE01 Gm22003-201ENSMUST00000101885 107 ntBASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 Gm25495-201ENSMUST00000104431 131 ntBASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 Gm12771-201ENSMUST00000120246 135 ntBASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 Gm23329-201ENSMUST00000157415 108 ntBASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 Gm25834-201ENSMUST00000158916 101 ntBASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 Gm22129-201ENSMUST00000179034 107 ntBASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 Gm23410-201ENSMUST00000179967 107 ntBASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 Gm22756-201ENSMUST00000180118 107 ntBASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 Gm29603-201ENSMUST00000186792 334 ntBASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 Gm44325-201ENSMUST00000196757 77 ntBASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 Gm44326-201ENSMUST00000198226 101 ntBASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 Gm45002-201ENSMUST00000208045 120 ntBASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 AC122320.1-201ENSMUST00000227233 105 ntBASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 Gm22306-201ENSMUST00000082692 107 ntBASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 Gm25142-201ENSMUST00000082698 107 ntBASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 Snord96a-201ENSMUST00000082791 81 ntBASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 Gm22505-201ENSMUST00000082956 108 ntBASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 Gm22363-201ENSMUST00000083100 108 ntBASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 Gm24457-201ENSMUST00000083196 105 ntBASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 Gm23814-201ENSMUST00000083230 102 ntBASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 Gm22744-201ENSMUST00000083444 65 ntBASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 Gm23095-201ENSMUST00000083446 107 ntBASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Snrnp40Q6PE01 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.3□□□□□ -2.2
Snrnp40Q6PE01 Gm25170-201ENSMUST00000104191 129 ntBASIC1.3□□□□□ -2.2
Snrnp40Q6PE01 Gm26301-201ENSMUST00000104813 95 ntBASIC1.3□□□□□ -2.2
Snrnp40Q6PE01 Gm22051-201ENSMUST00000117002 127 ntBASIC1.3□□□□□ -2.2
Snrnp40Q6PE01 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.3□□□□□ -2.2
Snrnp40Q6PE01 Gm12449-201ENSMUST00000117572 234 ntBASIC1.3□□□□□ -2.2
Snrnp40Q6PE01 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.3□□□□□ -2.2
Snrnp40Q6PE01 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC1.3□□□□□ -2.2
Snrnp40Q6PE01 Gm22586-201ENSMUST00000157507 122 ntBASIC1.3□□□□□ -2.2
Snrnp40Q6PE01 Gm22862-201ENSMUST00000178593 121 ntBASIC1.3□□□□□ -2.2
Snrnp40Q6PE01 Gm44853-201ENSMUST00000209070 250 ntBASIC1.3□□□□□ -2.2
Snrnp40Q6PE01 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC1.3□□□□□ -2.2
Snrnp40Q6PE01 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.3□□□□□ -2.2
Snrnp40Q6PE01 Snord1a-201ENSMUST00000083160 74 ntBASIC1.3□□□□□ -2.2
Snrnp40Q6PE01 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.29□□□□□ -2.2
Snrnp40Q6PE01 Gm23665-201ENSMUST00000158054 62 ntBASIC1.29□□□□□ -2.2
Snrnp40Q6PE01 Gm23760-201ENSMUST00000158350 116 ntBASIC1.29□□□□□ -2.2
Snrnp40Q6PE01 Gm22164-201ENSMUST00000158413 106 ntBASIC1.29□□□□□ -2.2
Snrnp40Q6PE01 Traj60-201ENSMUST00000167781 54 ntBASIC1.29□□□□□ -2.2
Snrnp40Q6PE01 Gm6003-201ENSMUST00000187903 463 ntBASIC1.29□□□□□ -2.2
Snrnp40Q6PE01 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.29□□□□□ -2.2
Snrnp40Q6PE01 Gm24624-201ENSMUST00000082617 164 ntBASIC1.29□□□□□ -2.2
Snrnp40Q6PE01 Gm25627-201ENSMUST00000084003 153 ntBASIC1.29□□□□□ -2.2
Snrnp40Q6PE01 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.29□□□□□ -2.2
Snrnp40Q6PE01 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.29□□□□□ -2.2
Snrnp40Q6PE01 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.28□□□□□ -2.2
Snrnp40Q6PE01 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.28□□□□□ -2.2
Snrnp40Q6PE01 Gm23864-201ENSMUST00000177607 107 ntBASIC1.28□□□□□ -2.2
Snrnp40Q6PE01 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.28□□□□□ -2.2
Snrnp40Q6PE01 Mir6350-201ENSMUST00000183639 105 ntBASIC1.28□□□□□ -2.2
Snrnp40Q6PE01 Gm44490-201ENSMUST00000198566 127 ntBASIC1.28□□□□□ -2.2
Snrnp40Q6PE01 Gm36189-201ENSMUST00000204113 523 ntBASIC1.28□□□□□ -2.2
Snrnp40Q6PE01 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.28□□□□□ -2.2
Snrnp40Q6PE01 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.28□□□□□ -2.2
Snrnp40Q6PE01 Gm26225-201ENSMUST00000082508 135 ntBASIC1.28□□□□□ -2.2
Snrnp40Q6PE01 Mir448-201ENSMUST00000083516 112 ntBASIC1.28□□□□□ -2.2
Snrnp40Q6PE01 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.28□□□□□ -2.2
Snrnp40Q6PE01 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.28□□□□□ -2.21
Snrnp40Q6PE01 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.21
Snrnp40Q6PE01 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Snrnp40Q6PE01 Gm25992-201ENSMUST00000102437 109 ntBASIC1.27□□□□□ -2.21
Snrnp40Q6PE01 Gm11792-201ENSMUST00000120640 168 ntBASIC1.27□□□□□ -2.21
Snrnp40Q6PE01 Gm25494-201ENSMUST00000158143 100 ntBASIC1.27□□□□□ -2.21
Snrnp40Q6PE01 Gm24174-201ENSMUST00000158933 111 ntBASIC1.27□□□□□ -2.21
Snrnp40Q6PE01 Mir3061-201ENSMUST00000175129 91 ntBASIC1.27□□□□□ -2.21
Snrnp40Q6PE01 Mir5104-201ENSMUST00000175319 94 ntBASIC1.27□□□□□ -2.21
Snrnp40Q6PE01 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Snrnp40Q6PE01 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Snrnp40Q6PE01 Gm23328-201ENSMUST00000157418 132 ntBASIC1.26□□□□□ -2.21
Snrnp40Q6PE01 Gm24015-201ENSMUST00000157725 232 ntBASIC1.26□□□□□ -2.21
Snrnp40Q6PE01 Gm25464-201ENSMUST00000175481 107 ntBASIC1.26□□□□□ -2.21
Snrnp40Q6PE01 Gm22929-201ENSMUST00000175517 107 ntBASIC1.26□□□□□ -2.21
Snrnp40Q6PE01 Gm23419-201ENSMUST00000175523 84 ntBASIC1.26□□□□□ -2.21
Snrnp40Q6PE01 Gm27711-201ENSMUST00000183802 118 ntBASIC1.26□□□□□ -2.21
Snrnp40Q6PE01 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
Snrnp40Q6PE01 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.26□□□□□ -2.21
Snrnp40Q6PE01 Gm24494-201ENSMUST00000083804 81 ntBASIC1.26□□□□□ -2.21
Snrnp40Q6PE01 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.26□□□□□ -2.21
Snrnp40Q6PE01 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Snrnp40Q6PE01 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Snrnp40Q6PE01 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.25□□□□□ -2.21
Snrnp40Q6PE01 Gm22785-201ENSMUST00000104087 132 ntBASIC1.25□□□□□ -2.21
Snrnp40Q6PE01 Gm16032-201ENSMUST00000118534 168 ntBASIC1.25□□□□□ -2.21
Snrnp40Q6PE01 Gm22477-201ENSMUST00000122569 316 ntBASIC1.25□□□□□ -2.21
Snrnp40Q6PE01 Gm23277-201ENSMUST00000157914 136 ntBASIC1.25□□□□□ -2.21
Snrnp40Q6PE01 Gm22163-201ENSMUST00000158408 135 ntBASIC1.25□□□□□ -2.21
Snrnp40Q6PE01 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Snrnp40Q6PE01 Gm27803-201ENSMUST00000183763 119 ntBASIC1.25□□□□□ -2.21
Snrnp40Q6PE01 Mir6351-201ENSMUST00000183826 99 ntBASIC1.25□□□□□ -2.21
Snrnp40Q6PE01 Gm23461-201ENSMUST00000083265 107 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 213.2 ms