Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm25364-201ENSMUST00000158851 107 ntBASIC1.86□□□□□ -2.11
Rnf220Q6PDX6 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Rnf220Q6PDX6 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Gm15067-201ENSMUST00000119534 156 ntBASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Gm22790-201ENSMUST00000157229 129 ntBASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Mir3061-201ENSMUST00000175129 91 ntBASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Gm23963-201ENSMUST00000179603 77 ntBASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Gm27511-201ENSMUST00000183502 127 ntBASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Gm43381-201ENSMUST00000198553 165 ntBASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Snora20-201ENSMUST00000082703 128 ntBASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Gm25038-201ENSMUST00000082928 130 ntBASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Gm25136-201ENSMUST00000083253 115 ntBASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.84□□□□□ -2.11
Rnf220Q6PDX6 Gm42770-201ENSMUST00000199657 4155 ntBASIC1.84□□□□□ -2.11
Rnf220Q6PDX6 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.84□□□□□ -2.11
Rnf220Q6PDX6 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.84□□□□□ -2.11
Rnf220Q6PDX6 Gm24010-201ENSMUST00000157731 282 ntBASIC1.84□□□□□ -2.11
Rnf220Q6PDX6 Gm23342-201ENSMUST00000158958 115 ntBASIC1.84□□□□□ -2.11
Rnf220Q6PDX6 Gm20391-201ENSMUST00000174722 106 ntBASIC1.84□□□□□ -2.11
Rnf220Q6PDX6 Mir7016-201ENSMUST00000184308 72 ntBASIC1.84□□□□□ -2.11
Rnf220Q6PDX6 Gm8219-201ENSMUST00000218309 242 ntBASIC1.84□□□□□ -2.11
Rnf220Q6PDX6 AC168880.2-201ENSMUST00000224488 201 ntBASIC1.84□□□□□ -2.11
Rnf220Q6PDX6 AC151902.2-201ENSMUST00000226419 301 ntBASIC1.84□□□□□ -2.11
Rnf220Q6PDX6 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.83□□□□□ -2.12
Rnf220Q6PDX6 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.83□□□□□ -2.12
Rnf220Q6PDX6 Gm22403-201ENSMUST00000174919 84 ntBASIC1.83□□□□□ -2.12
Rnf220Q6PDX6 Mir3103-201ENSMUST00000175474 67 ntBASIC1.83□□□□□ -2.12
Rnf220Q6PDX6 AL627387.1-201ENSMUST00000226063 250 ntBASIC1.83□□□□□ -2.12
Rnf220Q6PDX6 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.83□□□□□ -2.12
Rnf220Q6PDX6 Gm22683-201ENSMUST00000082854 137 ntBASIC1.83□□□□□ -2.12
Rnf220Q6PDX6 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Mir544-201ENSMUST00000103813 78 ntBASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Gm24263-201ENSMUST00000104059 107 ntBASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Gm25980-201ENSMUST00000157176 218 ntBASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Gm22082-201ENSMUST00000157587 161 ntBASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Mir7675-201ENSMUST00000184262 58 ntBASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Gm18502-201ENSMUST00000218679 199 ntBASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Gm24165-201ENSMUST00000082718 128 ntBASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Gm26326-201ENSMUST00000083070 129 ntBASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Mir489-201ENSMUST00000093599 107 ntBASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Rnf220Q6PDX6 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Rnf220Q6PDX6 Gm11792-201ENSMUST00000120640 168 ntBASIC1.81□□□□□ -2.12
Rnf220Q6PDX6 Gm37545-201ENSMUST00000186512 148 ntBASIC1.81□□□□□ -2.12
Rnf220Q6PDX6 Gm45471-201ENSMUST00000211270 281 ntBASIC1.81□□□□□ -2.12
Rnf220Q6PDX6 Snord61-201ENSMUST00000083176 71 ntBASIC1.81□□□□□ -2.12
Rnf220Q6PDX6 Gm23947-201ENSMUST00000093636 107 ntBASIC1.81□□□□□ -2.12
Rnf220Q6PDX6 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 Gm25090-201ENSMUST00000104000 132 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 Gm26015-201ENSMUST00000104402 125 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 Gm22105-201ENSMUST00000116734 116 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 Gm6444-201ENSMUST00000119611 458 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 Gm22603-201ENSMUST00000157603 96 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 Gm23277-201ENSMUST00000157914 136 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 Gm22159-201ENSMUST00000158412 130 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 Gm44358-201ENSMUST00000196301 98 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 Mir3969-201ENSMUST00000197106 92 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 AC155839.1-201ENSMUST00000200105 147 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 Mir497-201ENSMUST00000200557 84 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.79□□□□□ -2.12
Rnf220Q6PDX6 Gm24098-201ENSMUST00000102075 109 ntBASIC1.79□□□□□ -2.12
Rnf220Q6PDX6 Gm25381-201ENSMUST00000102078 109 ntBASIC1.79□□□□□ -2.12
Rnf220Q6PDX6 Gm22727-201ENSMUST00000158090 116 ntBASIC1.79□□□□□ -2.12
Rnf220Q6PDX6 Mir6379-201ENSMUST00000183392 115 ntBASIC1.79□□□□□ -2.12
Rnf220Q6PDX6 Gm18665-201ENSMUST00000189783 270 ntBASIC1.79□□□□□ -2.12
Rnf220Q6PDX6 Gm45754-201ENSMUST00000212380 279 ntBASIC1.79□□□□□ -2.12
Rnf220Q6PDX6 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.79□□□□□ -2.12
Rnf220Q6PDX6 Mir9-2-201ENSMUST00000083490 72 ntBASIC1.79□□□□□ -2.12
Rnf220Q6PDX6 Mir451a-201ENSMUST00000093557 72 ntBASIC1.79□□□□□ -2.12
Rnf220Q6PDX6 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.79□□□□□ -2.12
Rnf220Q6PDX6 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Rnf220Q6PDX6 Gm26090-201ENSMUST00000157897 128 ntBASIC1.78□□□□□ -2.12
Rnf220Q6PDX6 Gm22386-201ENSMUST00000158192 129 ntBASIC1.78□□□□□ -2.12
Rnf220Q6PDX6 Gm23760-201ENSMUST00000158350 116 ntBASIC1.78□□□□□ -2.12
Rnf220Q6PDX6 Gm25769-201ENSMUST00000158569 127 ntBASIC1.78□□□□□ -2.12
Rnf220Q6PDX6 Gm24677-201ENSMUST00000158755 150 ntBASIC1.78□□□□□ -2.12
Rnf220Q6PDX6 Trbv7-201ENSMUST00000193339 402 ntBASIC1.78□□□□□ -2.12
Rnf220Q6PDX6 Gm23299-201ENSMUST00000082708 79 ntBASIC1.78□□□□□ -2.12
Rnf220Q6PDX6 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Rnf220Q6PDX6 Gm25068-201ENSMUST00000103895 110 ntBASIC1.77□□□□□ -2.13
Rnf220Q6PDX6 Gm25094-201ENSMUST00000103992 131 ntBASIC1.77□□□□□ -2.13
Rnf220Q6PDX6 Snord90-201ENSMUST00000104568 111 ntBASIC1.77□□□□□ -2.13
Rnf220Q6PDX6 Gm13588-201ENSMUST00000120026 135 ntBASIC1.77□□□□□ -2.13
Rnf220Q6PDX6 Gm25949-201ENSMUST00000175333 114 ntBASIC1.77□□□□□ -2.13
Rnf220Q6PDX6 Gm23419-201ENSMUST00000175523 84 ntBASIC1.77□□□□□ -2.13
Rnf220Q6PDX6 Gm37778-201ENSMUST00000191732 190 ntBASIC1.77□□□□□ -2.13
Rnf220Q6PDX6 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Rnf220Q6PDX6 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Rnf220Q6PDX6 Gm26420-201ENSMUST00000104273 103 ntBASIC1.76□□□□□ -2.13
Rnf220Q6PDX6 Gm25707-201ENSMUST00000175120 96 ntBASIC1.76□□□□□ -2.13
Rnf220Q6PDX6 Gm22929-201ENSMUST00000175517 107 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 137.1 ms