Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Gm23331-201ENSMUST00000157423 108 ntBASIC-1.02□□□□□ -2.57
NipblQ6KCD5 AC158982.2-201ENSMUST00000226283 184 ntBASIC-1.02□□□□□ -2.57
NipblQ6KCD5 Gm22743-201ENSMUST00000083445 133 ntBASIC-1.02□□□□□ -2.57
NipblQ6KCD5 Gm22831-201ENSMUST00000102473 109 ntBASIC-1.02□□□□□ -2.57
NipblQ6KCD5 Gm12016-201ENSMUST00000119079 681 ntBASIC-1.02□□□□□ -2.57
NipblQ6KCD5 Defa-ps13-201ENSMUST00000120695 204 ntBASIC-1.02□□□□□ -2.57
NipblQ6KCD5 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.02□□□□□ -2.57
NipblQ6KCD5 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC-1.02□□□□□ -2.57
NipblQ6KCD5 Gm27749-201ENSMUST00000183651 125 ntBASIC-1.02□□□□□ -2.57
NipblQ6KCD5 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC-1.02□□□□□ -2.57
NipblQ6KCD5 Gm26456-201ENSMUST00000082831 111 ntBASIC-1.02□□□□□ -2.57
NipblQ6KCD5 Gm23939-201ENSMUST00000082880 133 ntBASIC-1.02□□□□□ -2.57
NipblQ6KCD5 Gm22974-201ENSMUST00000083301 103 ntBASIC-1.02□□□□□ -2.57
NipblQ6KCD5 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-1.02□□□□□ -2.57
NipblQ6KCD5 Gm24336-201ENSMUST00000104203 146 ntBASIC-1.03□□□□□ -2.57
NipblQ6KCD5 Gm22100-201ENSMUST00000157926 63 ntBASIC-1.03□□□□□ -2.57
NipblQ6KCD5 Snord123-201ENSMUST00000158692 71 ntBASIC-1.03□□□□□ -2.57
NipblQ6KCD5 Gm25235-201ENSMUST00000179933 107 ntBASIC-1.03□□□□□ -2.57
NipblQ6KCD5 Ighv1-32-201ENSMUST00000195149 351 ntBASIC-1.03□□□□□ -2.57
NipblQ6KCD5 Mir10a-201ENSMUST00000083585 110 ntBASIC-1.03□□□□□ -2.57
NipblQ6KCD5 Gm29848-201ENSMUST00000203107 295 ntBASIC-1.03□□□□□ -2.57
NipblQ6KCD5 mt-Tc-201ENSMUST00000082400 66 ntBASIC-1.03□□□□□ -2.57
NipblQ6KCD5 Gm24043-201ENSMUST00000083108 116 ntBASIC-1.03□□□□□ -2.57
NipblQ6KCD5 AC133079.1-201ENSMUST00000220943 1881 ntBASIC-1.04□□□□□ -2.58
NipblQ6KCD5 Gm22888-201ENSMUST00000158640 77 ntBASIC-1.04□□□□□ -2.58
NipblQ6KCD5 AC153541.1-201ENSMUST00000213786 294 ntBASIC-1.04□□□□□ -2.58
NipblQ6KCD5 Gm26066-201ENSMUST00000083385 109 ntBASIC-1.04□□□□□ -2.58
NipblQ6KCD5 Gm23058-201ENSMUST00000093703 107 ntBASIC-1.04□□□□□ -2.58
NipblQ6KCD5 Gm25366-201ENSMUST00000158845 124 ntBASIC-1.04□□□□□ -2.58
NipblQ6KCD5 Gm26158-201ENSMUST00000158973 119 ntBASIC-1.04□□□□□ -2.58
NipblQ6KCD5 Gm24913-201ENSMUST00000157286 107 ntBASIC-1.05□□□□□ -2.58
NipblQ6KCD5 Gm23917-201ENSMUST00000175256 98 ntBASIC-1.05□□□□□ -2.58
NipblQ6KCD5 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.05□□□□□ -2.58
NipblQ6KCD5 Gm24415-201ENSMUST00000180218 107 ntBASIC-1.05□□□□□ -2.58
NipblQ6KCD5 Gm44300-201ENSMUST00000196792 121 ntBASIC-1.05□□□□□ -2.58
NipblQ6KCD5 Snord45b-201ENSMUST00000082797 71 ntBASIC-1.05□□□□□ -2.58
NipblQ6KCD5 Gm23881-201ENSMUST00000116872 66 ntBASIC-1.05□□□□□ -2.58
NipblQ6KCD5 Gm14989-201ENSMUST00000120497 207 ntBASIC-1.05□□□□□ -2.58
NipblQ6KCD5 Gm25598-201ENSMUST00000179031 107 ntBASIC-1.05□□□□□ -2.58
NipblQ6KCD5 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-1.06□□□□□ -2.58
NipblQ6KCD5 Gm23633-201ENSMUST00000175293 119 ntBASIC-1.06□□□□□ -2.58
NipblQ6KCD5 Gm44865-201ENSMUST00000207240 531 ntBASIC-1.06□□□□□ -2.58
NipblQ6KCD5 AL645546.2-201ENSMUST00000224526 265 ntBASIC-1.06□□□□□ -2.58
NipblQ6KCD5 mt-Tw-201ENSMUST00000082397 67 ntBASIC-1.06□□□□□ -2.58
NipblQ6KCD5 Gm25854-201ENSMUST00000082792 72 ntBASIC-1.06□□□□□ -2.58
NipblQ6KCD5 Mir122-201ENSMUST00000083468 66 ntBASIC-1.06□□□□□ -2.58
NipblQ6KCD5 Gm24892-201ENSMUST00000122747 104 ntBASIC-1.06□□□□□ -2.58
NipblQ6KCD5 Gm23219-201ENSMUST00000158123 87 ntBASIC-1.06□□□□□ -2.58
NipblQ6KCD5 Gm25464-201ENSMUST00000175481 107 ntBASIC-1.06□□□□□ -2.58
NipblQ6KCD5 Gm27342-201ENSMUST00000183530 109 ntBASIC-1.06□□□□□ -2.58
NipblQ6KCD5 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC-1.06□□□□□ -2.58
NipblQ6KCD5 Gm37709-201ENSMUST00000195074 600 ntBASIC-1.06□□□□□ -2.58
NipblQ6KCD5 AC125311.1-201ENSMUST00000226950 220 ntBASIC-1.06□□□□□ -2.58
NipblQ6KCD5 Gm23535-201ENSMUST00000157542 106 ntBASIC-1.07□□□□□ -2.58
NipblQ6KCD5 Gm22539-201ENSMUST00000158167 117 ntBASIC-1.07□□□□□ -2.58
NipblQ6KCD5 Gm26355-201ENSMUST00000158220 105 ntBASIC-1.07□□□□□ -2.58
NipblQ6KCD5 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
NipblQ6KCD5 Gm17067-202ENSMUST00000180131 123 ntBASIC-1.07□□□□□ -2.58
NipblQ6KCD5 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC-1.07□□□□□ -2.58
NipblQ6KCD5 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.07□□□□□ -2.58
NipblQ6KCD5 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-1.07□□□□□ -2.58
NipblQ6KCD5 Snord67-201ENSMUST00000104033 111 ntBASIC-1.07□□□□□ -2.58
NipblQ6KCD5 Gm12469-201ENSMUST00000117623 207 ntBASIC-1.07□□□□□ -2.58
NipblQ6KCD5 Gm26349-201ENSMUST00000157530 130 ntBASIC-1.07□□□□□ -2.58
NipblQ6KCD5 Gm23589-201ENSMUST00000157660 105 ntBASIC-1.07□□□□□ -2.58
NipblQ6KCD5 Gm25223-201ENSMUST00000158200 110 ntBASIC-1.07□□□□□ -2.58
NipblQ6KCD5 Gm18185-201ENSMUST00000186725 667 ntBASIC-1.07□□□□□ -2.58
NipblQ6KCD5 Gm44324-201ENSMUST00000198517 135 ntBASIC-1.07□□□□□ -2.58
NipblQ6KCD5 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC-1.07□□□□□ -2.58
NipblQ6KCD5 Gm25855-201ENSMUST00000082787 72 ntBASIC-1.07□□□□□ -2.58
NipblQ6KCD5 Gm23506-201ENSMUST00000083077 107 ntBASIC-1.07□□□□□ -2.58
NipblQ6KCD5 Mir369-201ENSMUST00000083627 79 ntBASIC-1.07□□□□□ -2.58
NipblQ6KCD5 Gm23196-201ENSMUST00000158806 107 ntBASIC-1.08□□□□□ -2.58
NipblQ6KCD5 Gm27817-201ENSMUST00000184302 233 ntBASIC-1.08□□□□□ -2.58
NipblQ6KCD5 Gm27784-201ENSMUST00000184926 113 ntBASIC-1.08□□□□□ -2.58
NipblQ6KCD5 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC-1.08□□□□□ -2.58
NipblQ6KCD5 Gm44857-201ENSMUST00000208331 196 ntBASIC-1.08□□□□□ -2.58
NipblQ6KCD5 AC144733.1-201ENSMUST00000222893 1289 ntBASIC-1.08□□□□□ -2.58
NipblQ6KCD5 Mir325-201ENSMUST00000083491 98 ntBASIC-1.08□□□□□ -2.58
NipblQ6KCD5 Gm25337-201ENSMUST00000083723 104 ntBASIC-1.08□□□□□ -2.58
NipblQ6KCD5 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC-1.08□□□□□ -2.58
NipblQ6KCD5 Mir687-201ENSMUST00000102166 89 ntBASIC-1.08□□□□□ -2.58
NipblQ6KCD5 Gm24355-201ENSMUST00000082858 122 ntBASIC-1.08□□□□□ -2.58
NipblQ6KCD5 Mir34a-201ENSMUST00000083559 102 ntBASIC-1.08□□□□□ -2.58
NipblQ6KCD5 Gm24100-201ENSMUST00000178592 79 ntBASIC-1.08□□□□□ -2.58
NipblQ6KCD5 Gm14536-201ENSMUST00000118324 138 ntBASIC-1.09□□□□□ -2.58
NipblQ6KCD5 Gm15027-201ENSMUST00000120922 138 ntBASIC-1.09□□□□□ -2.58
NipblQ6KCD5 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.09□□□□□ -2.58
NipblQ6KCD5 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.09□□□□□ -2.58
NipblQ6KCD5 Gm25739-201ENSMUST00000082886 107 ntBASIC-1.09□□□□□ -2.58
NipblQ6KCD5 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC-1.09□□□□□ -2.58
NipblQ6KCD5 Gm23975-201ENSMUST00000082685 106 ntBASIC-1.09□□□□□ -2.58
NipblQ6KCD5 Gm14359-201ENSMUST00000118883 424 ntBASIC-1.1□□□□□ -2.59
NipblQ6KCD5 Gm22335-201ENSMUST00000157724 99 ntBASIC-1.1□□□□□ -2.59
NipblQ6KCD5 Gm22606-201ENSMUST00000158290 103 ntBASIC-1.1□□□□□ -2.59
NipblQ6KCD5 Gm24268-201ENSMUST00000082990 110 ntBASIC-1.1□□□□□ -2.59
NipblQ6KCD5 Mir216b-201ENSMUST00000102363 86 ntBASIC-1.1□□□□□ -2.59
NipblQ6KCD5 Gm18291-201ENSMUST00000190791 301 ntBASIC-1.1□□□□□ -2.59
NipblQ6KCD5 AC116589.1-201ENSMUST00000220634 327 ntBASIC-1.1□□□□□ -2.59
NipblQ6KCD5 AC164117.2-201ENSMUST00000222090 327 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms