Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm25008-201ENSMUST00000083809 81 ntBASIC-0.41□□□□□ -2.47
Col7a1Q63870 Gm22105-201ENSMUST00000116734 116 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm14638-201ENSMUST00000121338 216 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm25112-201ENSMUST00000122680 104 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm26369-201ENSMUST00000157825 100 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm23763-201ENSMUST00000158345 60 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm25194-201ENSMUST00000177987 79 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm38019-201ENSMUST00000195133 380 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm43026-201ENSMUST00000202972 325 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm43993-201ENSMUST00000203972 247 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm44865-201ENSMUST00000207240 531 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm19248-201ENSMUST00000209404 110 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 AC159297.2-201ENSMUST00000219567 1075 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm22577-201ENSMUST00000083731 109 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm26249-201ENSMUST00000116708 118 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm22281-201ENSMUST00000157198 103 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm22842-201ENSMUST00000157709 118 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm25522-201ENSMUST00000158394 105 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm22888-201ENSMUST00000158640 77 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm25444-201ENSMUST00000158999 113 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm27995-201ENSMUST00000184402 100 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm18667-201ENSMUST00000186523 484 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm42622-201ENSMUST00000197229 355 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 AC154552.5-201ENSMUST00000222352 207 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.41□□□□□ -2.48
Col7a1Q63870 Gm24806-201ENSMUST00000117036 90 ntBASIC-0.42□□□□□ -2.48
Col7a1Q63870 Gm25269-201ENSMUST00000122601 104 ntBASIC-0.42□□□□□ -2.48
Col7a1Q63870 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.42□□□□□ -2.48
Col7a1Q63870 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC-0.42□□□□□ -2.48
Col7a1Q63870 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-0.42□□□□□ -2.48
Col7a1Q63870 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC-0.42□□□□□ -2.48
Col7a1Q63870 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC-0.42□□□□□ -2.48
Col7a1Q63870 Gm24439-201ENSMUST00000157894 117 ntBASIC-0.42□□□□□ -2.48
Col7a1Q63870 Gm24625-201ENSMUST00000082622 130 ntBASIC-0.42□□□□□ -2.48
Col7a1Q63870 Gm23570-201ENSMUST00000083029 104 ntBASIC-0.42□□□□□ -2.48
Col7a1Q63870 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-0.42□□□□□ -2.48
Col7a1Q63870 Gm23731-201ENSMUST00000083749 107 ntBASIC-0.42□□□□□ -2.48
Col7a1Q63870 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.42□□□□□ -2.48
Col7a1Q63870 AC160115.1-201ENSMUST00000224678 1574 ntBASIC-0.42□□□□□ -2.48
Col7a1Q63870 Gm15279-201ENSMUST00000155593 288 ntBASIC-0.43□□□□□ -2.48
Col7a1Q63870 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.43□□□□□ -2.48
Col7a1Q63870 Gm23921-201ENSMUST00000175258 107 ntBASIC-0.43□□□□□ -2.48
Col7a1Q63870 Gm44282-201ENSMUST00000203199 190 ntBASIC-0.43□□□□□ -2.48
Col7a1Q63870 Gm24612-201ENSMUST00000083267 107 ntBASIC-0.43□□□□□ -2.48
Col7a1Q63870 Gm22753-201ENSMUST00000083657 107 ntBASIC-0.43□□□□□ -2.48
Col7a1Q63870 Gm14298-201ENSMUST00000139032 237 ntBASIC-0.43□□□□□ -2.48
Col7a1Q63870 Gm25225-201ENSMUST00000158197 102 ntBASIC-0.43□□□□□ -2.48
Col7a1Q63870 Mir6369-201ENSMUST00000183772 106 ntBASIC-0.43□□□□□ -2.48
Col7a1Q63870 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC-0.43□□□□□ -2.48
Col7a1Q63870 Gm25797-201ENSMUST00000082640 107 ntBASIC-0.43□□□□□ -2.48
Col7a1Q63870 Gm22743-201ENSMUST00000083445 133 ntBASIC-0.43□□□□□ -2.48
Col7a1Q63870 Mir547-201ENSMUST00000102051 78 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm9059-201ENSMUST00000118319 183 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm14359-201ENSMUST00000118883 424 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm24185-201ENSMUST00000122578 105 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm24728-201ENSMUST00000158226 125 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm22402-201ENSMUST00000174920 110 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Snord116l14-201ENSMUST00000179875 94 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm43563-201ENSMUST00000196761 198 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Mir7661-201ENSMUST00000197023 61 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm23733-201ENSMUST00000083750 106 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm25186-201ENSMUST00000083909 108 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Mir485-201ENSMUST00000093620 73 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm25610-201ENSMUST00000104016 129 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 n-R5s218-201ENSMUST00000122583 109 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm25156-201ENSMUST00000179809 79 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm27793-201ENSMUST00000183405 76 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm28299-201ENSMUST00000189908 339 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm43556-201ENSMUST00000196186 681 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 AC121844.1-201ENSMUST00000218706 137 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm23628-201ENSMUST00000082464 173 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm25023-201ENSMUST00000082977 107 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm23097-201ENSMUST00000083448 105 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm24836-201ENSMUST00000122609 108 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm37918-201ENSMUST00000192071 120 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm44337-201ENSMUST00000196553 114 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 AC141438.3-201ENSMUST00000215632 202 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 AC116589.9-201ENSMUST00000221462 908 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm26446-201ENSMUST00000082455 103 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm23301-201ENSMUST00000082713 65 ntBASIC-0.44□□□□□ -2.48
Col7a1Q63870 Gm25756-201ENSMUST00000103990 136 ntBASIC-0.45□□□□□ -2.48
Col7a1Q63870 Gm14536-201ENSMUST00000118324 138 ntBASIC-0.45□□□□□ -2.48
Col7a1Q63870 Gm15027-201ENSMUST00000120922 138 ntBASIC-0.45□□□□□ -2.48
Col7a1Q63870 Gm26200-201ENSMUST00000180273 79 ntBASIC-0.45□□□□□ -2.48
Col7a1Q63870 Mir6957-201ENSMUST00000183708 64 ntBASIC-0.45□□□□□ -2.48
Col7a1Q63870 Gm28343-201ENSMUST00000185386 112 ntBASIC-0.45□□□□□ -2.48
Col7a1Q63870 Gm37624-201ENSMUST00000193751 219 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 76,532 protein–RNA pairs in 293.8 ms