Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm25673-201ENSMUST00000179957 127 ntBASIC1.22□□□□□ -2.21
Trim27Q62158 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Trim27Q62158 Gm25142-201ENSMUST00000082698 107 ntBASIC1.22□□□□□ -2.21
Trim27Q62158 Gm24342-201ENSMUST00000103907 104 ntBASIC1.21□□□□□ -2.22
Trim27Q62158 Gm11388-201ENSMUST00000120908 159 ntBASIC1.21□□□□□ -2.22
Trim27Q62158 Gm23114-201ENSMUST00000158478 117 ntBASIC1.21□□□□□ -2.22
Trim27Q62158 Gm25044-201ENSMUST00000158603 104 ntBASIC1.21□□□□□ -2.22
Trim27Q62158 Mir6985-201ENSMUST00000184641 61 ntBASIC1.21□□□□□ -2.22
Trim27Q62158 Gm42506-201ENSMUST00000202009 150 ntBASIC1.21□□□□□ -2.22
Trim27Q62158 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.21□□□□□ -2.22
Trim27Q62158 Gm22051-201ENSMUST00000117002 127 ntBASIC1.2□□□□□ -2.22
Trim27Q62158 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC1.2□□□□□ -2.22
Trim27Q62158 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.2□□□□□ -2.22
Trim27Q62158 Mir6380-201ENSMUST00000184334 81 ntBASIC1.2□□□□□ -2.22
Trim27Q62158 Gm28669-201ENSMUST00000188400 100 ntBASIC1.2□□□□□ -2.22
Trim27Q62158 Gm19572-201ENSMUST00000214326 338 ntBASIC1.2□□□□□ -2.22
Trim27Q62158 Gm18188-201ENSMUST00000219386 478 ntBASIC1.2□□□□□ -2.22
Trim27Q62158 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.2□□□□□ -2.22
Trim27Q62158 Gm24000-201ENSMUST00000158063 89 ntBASIC1.19□□□□□ -2.22
Trim27Q62158 Gm25558-201ENSMUST00000158083 106 ntBASIC1.19□□□□□ -2.22
Trim27Q62158 Gm24942-201ENSMUST00000158328 114 ntBASIC1.19□□□□□ -2.22
Trim27Q62158 Gm25011-201ENSMUST00000158398 126 ntBASIC1.19□□□□□ -2.22
Trim27Q62158 Gm36189-201ENSMUST00000204113 523 ntBASIC1.19□□□□□ -2.22
Trim27Q62158 Snora41-201ENSMUST00000082668 132 ntBASIC1.19□□□□□ -2.22
Trim27Q62158 Mir196b-201ENSMUST00000083509 85 ntBASIC1.19□□□□□ -2.22
Trim27Q62158 Gm24271-201ENSMUST00000102327 111 ntBASIC1.18□□□□□ -2.22
Trim27Q62158 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Trim27Q62158 Gm14568-201ENSMUST00000119321 294 ntBASIC1.18□□□□□ -2.22
Trim27Q62158 Gm13797-201ENSMUST00000121792 120 ntBASIC1.18□□□□□ -2.22
Trim27Q62158 Gm25838-201ENSMUST00000158920 120 ntBASIC1.18□□□□□ -2.22
Trim27Q62158 Gm22914-201ENSMUST00000175195 77 ntBASIC1.18□□□□□ -2.22
Trim27Q62158 Gm25949-201ENSMUST00000175333 114 ntBASIC1.18□□□□□ -2.22
Trim27Q62158 Gm23002-201ENSMUST00000179221 107 ntBASIC1.18□□□□□ -2.22
Trim27Q62158 Gm38019-201ENSMUST00000195133 380 ntBASIC1.18□□□□□ -2.22
Trim27Q62158 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC1.18□□□□□ -2.22
Trim27Q62158 Mir344-201ENSMUST00000083634 95 ntBASIC1.18□□□□□ -2.22
Trim27Q62158 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Trim27Q62158 Gm25783-201ENSMUST00000122525 190 ntBASIC1.17□□□□□ -2.22
Trim27Q62158 Gm25768-201ENSMUST00000158570 98 ntBASIC1.17□□□□□ -2.22
Trim27Q62158 Gm20391-201ENSMUST00000174722 106 ntBASIC1.17□□□□□ -2.22
Trim27Q62158 Gm25935-201ENSMUST00000178746 107 ntBASIC1.17□□□□□ -2.22
Trim27Q62158 Gm29490-201ENSMUST00000190923 342 ntBASIC1.17□□□□□ -2.22
Trim27Q62158 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.17□□□□□ -2.22
Trim27Q62158 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.17□□□□□ -2.22
Trim27Q62158 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.17□□□□□ -2.22
Trim27Q62158 Gm22515-201ENSMUST00000158273 305 ntBASIC1.16□□□□□ -2.22
Trim27Q62158 Gm22565-201ENSMUST00000175540 69 ntBASIC1.16□□□□□ -2.22
Trim27Q62158 Gm44458-201ENSMUST00000196594 143 ntBASIC1.16□□□□□ -2.22
Trim27Q62158 Gm25634-201ENSMUST00000082667 105 ntBASIC1.16□□□□□ -2.22
Trim27Q62158 Gm24171-201ENSMUST00000104126 131 ntBASIC1.15□□□□□ -2.23
Trim27Q62158 Gm14883-201ENSMUST00000120179 157 ntBASIC1.15□□□□□ -2.23
Trim27Q62158 Mir7091-201ENSMUST00000184075 79 ntBASIC1.15□□□□□ -2.23
Trim27Q62158 Gm44326-201ENSMUST00000198226 101 ntBASIC1.15□□□□□ -2.23
Trim27Q62158 Gm25851-201ENSMUST00000082794 107 ntBASIC1.15□□□□□ -2.23
Trim27Q62158 Snord89-201ENSMUST00000104516 110 ntBASIC1.14□□□□□ -2.23
Trim27Q62158 Mir654-201ENSMUST00000104787 84 ntBASIC1.14□□□□□ -2.23
Trim27Q62158 Gm25166-201ENSMUST00000158909 111 ntBASIC1.14□□□□□ -2.23
Trim27Q62158 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC1.14□□□□□ -2.23
Trim27Q62158 Gm37715-201ENSMUST00000193206 235 ntBASIC1.14□□□□□ -2.23
Trim27Q62158 AC165092.3-201ENSMUST00000223602 282 ntBASIC1.14□□□□□ -2.23
Trim27Q62158 Gm25855-201ENSMUST00000082787 72 ntBASIC1.14□□□□□ -2.23
Trim27Q62158 Mir324-201ENSMUST00000083600 89 ntBASIC1.14□□□□□ -2.23
Trim27Q62158 Gm23347-201ENSMUST00000083823 82 ntBASIC1.14□□□□□ -2.23
Trim27Q62158 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.13□□□□□ -2.23
Trim27Q62158 Gm22200-201ENSMUST00000158614 67 ntBASIC1.13□□□□□ -2.23
Trim27Q62158 Mir6336-201ENSMUST00000183581 130 ntBASIC1.13□□□□□ -2.23
Trim27Q62158 Gm45544-201ENSMUST00000211130 88 ntBASIC1.13□□□□□ -2.23
Trim27Q62158 Gm14671-201ENSMUST00000121790 262 ntBASIC1.12□□□□□ -2.23
Trim27Q62158 Gm22586-201ENSMUST00000157507 122 ntBASIC1.12□□□□□ -2.23
Trim27Q62158 Gm22387-201ENSMUST00000158191 131 ntBASIC1.12□□□□□ -2.23
Trim27Q62158 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Trim27Q62158 Mir6350-201ENSMUST00000183639 105 ntBASIC1.12□□□□□ -2.23
Trim27Q62158 Mir7663-201ENSMUST00000183950 61 ntBASIC1.12□□□□□ -2.23
Trim27Q62158 Gm27365-201ENSMUST00000184041 177 ntBASIC1.12□□□□□ -2.23
Trim27Q62158 Gm20118-201ENSMUST00000187207 162 ntBASIC1.12□□□□□ -2.23
Trim27Q62158 Gm44396-201ENSMUST00000199843 114 ntBASIC1.12□□□□□ -2.23
Trim27Q62158 Gm22283-201ENSMUST00000082556 161 ntBASIC1.12□□□□□ -2.23
Trim27Q62158 Gm23655-201ENSMUST00000122627 105 ntBASIC1.11□□□□□ -2.23
Trim27Q62158 Gm23466-201ENSMUST00000157133 106 ntBASIC1.11□□□□□ -2.23
Trim27Q62158 Gm26482-201ENSMUST00000158015 62 ntBASIC1.11□□□□□ -2.23
Trim27Q62158 Gm25715-201ENSMUST00000158627 125 ntBASIC1.11□□□□□ -2.23
Trim27Q62158 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.11□□□□□ -2.23
Trim27Q62158 Gm25878-201ENSMUST00000104327 93 ntBASIC1.1□□□□□ -2.23
Trim27Q62158 Gm15069-201ENSMUST00000117792 192 ntBASIC1.1□□□□□ -2.23
Trim27Q62158 Gm15068-201ENSMUST00000119796 192 ntBASIC1.1□□□□□ -2.23
Trim27Q62158 Gm24777-201ENSMUST00000157644 107 ntBASIC1.1□□□□□ -2.23
Trim27Q62158 Gm24401-201ENSMUST00000157868 91 ntBASIC1.1□□□□□ -2.23
Trim27Q62158 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC1.1□□□□□ -2.23
Trim27Q62158 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.1□□□□□ -2.23
Trim27Q62158 AC154213.2-201ENSMUST00000227138 187 ntBASIC1.1□□□□□ -2.23
Trim27Q62158 mt-Ti-201ENSMUST00000082393 69 ntBASIC1.1□□□□□ -2.23
Trim27Q62158 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.09□□□□□ -2.23
Trim27Q62158 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
Trim27Q62158 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Trim27Q62158 Gm23893-201ENSMUST00000158106 134 ntBASIC1.09□□□□□ -2.23
Trim27Q62158 Gm22163-201ENSMUST00000158408 135 ntBASIC1.09□□□□□ -2.23
Trim27Q62158 Gm24345-201ENSMUST00000158706 124 ntBASIC1.09□□□□□ -2.23
Trim27Q62158 Gm24020-201ENSMUST00000180156 108 ntBASIC1.09□□□□□ -2.23
Trim27Q62158 Gm27587-201ENSMUST00000185116 163 ntBASIC1.09□□□□□ -2.23
Trim27Q62158 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms