Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm15027-201ENSMUST00000120922 138 ntBASIC1.95□□□□□ -2.1
CtcfQ61164 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.95□□□□□ -2.1
CtcfQ61164 Gm24510-201ENSMUST00000174965 94 ntBASIC1.95□□□□□ -2.1
CtcfQ61164 Gm23090-201ENSMUST00000177331 78 ntBASIC1.95□□□□□ -2.1
CtcfQ61164 Gm23100-201ENSMUST00000083455 141 ntBASIC1.95□□□□□ -2.1
CtcfQ61164 Gm22373-201ENSMUST00000104584 89 ntBASIC1.94□□□□□ -2.1
CtcfQ61164 Gm6952-201ENSMUST00000118629 159 ntBASIC1.94□□□□□ -2.1
CtcfQ61164 Gm14709-201ENSMUST00000121225 304 ntBASIC1.94□□□□□ -2.1
CtcfQ61164 Gm22477-201ENSMUST00000122569 316 ntBASIC1.94□□□□□ -2.1
CtcfQ61164 Gm26049-201ENSMUST00000157313 108 ntBASIC1.94□□□□□ -2.1
CtcfQ61164 Gm24783-201ENSMUST00000157639 100 ntBASIC1.94□□□□□ -2.1
CtcfQ61164 Snord87-201ENSMUST00000175437 87 ntBASIC1.94□□□□□ -2.1
CtcfQ61164 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.94□□□□□ -2.1
CtcfQ61164 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.94□□□□□ -2.1
CtcfQ61164 AL627387.1-201ENSMUST00000226063 250 ntBASIC1.94□□□□□ -2.1
CtcfQ61164 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CtcfQ61164 Mir669b-201ENSMUST00000102172 97 ntBASIC1.93□□□□□ -2.1
CtcfQ61164 Mir301b-201ENSMUST00000102333 97 ntBASIC1.93□□□□□ -2.1
CtcfQ61164 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.93□□□□□ -2.1
CtcfQ61164 Gm24076-201ENSMUST00000158179 94 ntBASIC1.93□□□□□ -2.1
CtcfQ61164 Gm23337-201ENSMUST00000158959 118 ntBASIC1.93□□□□□ -2.1
CtcfQ61164 Gm26160-201ENSMUST00000158965 63 ntBASIC1.93□□□□□ -2.1
CtcfQ61164 Gm24638-201ENSMUST00000179807 132 ntBASIC1.93□□□□□ -2.1
CtcfQ61164 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CtcfQ61164 Gm29603-201ENSMUST00000186792 334 ntBASIC1.93□□□□□ -2.1
CtcfQ61164 Gm21064-202ENSMUST00000190583 278 ntBASIC1.93□□□□□ -2.1
CtcfQ61164 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC1.93□□□□□ -2.1
CtcfQ61164 Gm10351-201ENSMUST00000087694 125 ntBASIC1.93□□□□□ -2.1
CtcfQ61164 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CtcfQ61164 Mir466b-3-201ENSMUST00000103806 81 ntBASIC1.92□□□□□ -2.1
CtcfQ61164 Gm23320-201ENSMUST00000104462 127 ntBASIC1.92□□□□□ -2.1
CtcfQ61164 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.92□□□□□ -2.1
CtcfQ61164 Gm23172-201ENSMUST00000157160 124 ntBASIC1.92□□□□□ -2.1
CtcfQ61164 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.92□□□□□ -2.1
CtcfQ61164 Gm20477-201ENSMUST00000174028 280 ntBASIC1.92□□□□□ -2.1
CtcfQ61164 Gm23967-201ENSMUST00000175062 78 ntBASIC1.92□□□□□ -2.1
CtcfQ61164 Gm28912-201ENSMUST00000189001 234 ntBASIC1.92□□□□□ -2.1
CtcfQ61164 Gm35736-201ENSMUST00000203681 313 ntBASIC1.92□□□□□ -2.1
CtcfQ61164 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CtcfQ61164 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
CtcfQ61164 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CtcfQ61164 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CtcfQ61164 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
CtcfQ61164 Gm25879-201ENSMUST00000104330 107 ntBASIC1.91□□□□□ -2.1
CtcfQ61164 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.91□□□□□ -2.1
CtcfQ61164 Gm24851-201ENSMUST00000158028 103 ntBASIC1.91□□□□□ -2.1
CtcfQ61164 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.91□□□□□ -2.1
CtcfQ61164 Gm22686-201ENSMUST00000082847 100 ntBASIC1.91□□□□□ -2.1
CtcfQ61164 Gm25513-201ENSMUST00000083861 162 ntBASIC1.91□□□□□ -2.1
CtcfQ61164 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CtcfQ61164 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
CtcfQ61164 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
CtcfQ61164 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
CtcfQ61164 Mir223-201ENSMUST00000102112 110 ntBASIC1.9□□□□□ -2.11
CtcfQ61164 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CtcfQ61164 Gm23718-201ENSMUST00000157350 307 ntBASIC1.9□□□□□ -2.11
CtcfQ61164 Gm23854-201ENSMUST00000158378 108 ntBASIC1.9□□□□□ -2.11
CtcfQ61164 Gm37778-201ENSMUST00000191732 190 ntBASIC1.9□□□□□ -2.11
CtcfQ61164 Gm44052-201ENSMUST00000203382 396 ntBASIC1.9□□□□□ -2.11
CtcfQ61164 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.9□□□□□ -2.11
CtcfQ61164 Gm23947-201ENSMUST00000093636 107 ntBASIC1.9□□□□□ -2.11
CtcfQ61164 Gm22850-201ENSMUST00000157714 82 ntBASIC1.89□□□□□ -2.11
CtcfQ61164 Gm44326-201ENSMUST00000198226 101 ntBASIC1.89□□□□□ -2.11
CtcfQ61164 Trav5-2-201ENSMUST00000199855 280 ntBASIC1.89□□□□□ -2.11
CtcfQ61164 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.89□□□□□ -2.11
CtcfQ61164 Gm10172-201ENSMUST00000085929 558 ntBASIC1.89□□□□□ -2.11
CtcfQ61164 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.88□□□□□ -2.11
CtcfQ61164 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CtcfQ61164 Gm14674-201ENSMUST00000117816 342 ntBASIC1.88□□□□□ -2.11
CtcfQ61164 Gm25825-201ENSMUST00000157091 124 ntBASIC1.88□□□□□ -2.11
CtcfQ61164 Gm23043-201ENSMUST00000157890 109 ntBASIC1.88□□□□□ -2.11
CtcfQ61164 Gm25491-201ENSMUST00000158733 308 ntBASIC1.88□□□□□ -2.11
CtcfQ61164 Gm9156-201ENSMUST00000189660 463 ntBASIC1.88□□□□□ -2.11
CtcfQ61164 Gm45754-201ENSMUST00000212380 279 ntBASIC1.88□□□□□ -2.11
CtcfQ61164 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.88□□□□□ -2.11
CtcfQ61164 Mir155-201ENSMUST00000083463 65 ntBASIC1.88□□□□□ -2.11
CtcfQ61164 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
CtcfQ61164 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.88□□□□□ -2.11
CtcfQ61164 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.87□□□□□ -2.11
CtcfQ61164 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CtcfQ61164 Gm25170-201ENSMUST00000104191 129 ntBASIC1.87□□□□□ -2.11
CtcfQ61164 Gm11334-201ENSMUST00000121969 156 ntBASIC1.87□□□□□ -2.11
CtcfQ61164 Rnu7-201ENSMUST00000158458 62 ntBASIC1.87□□□□□ -2.11
CtcfQ61164 Gm24222-201ENSMUST00000158834 93 ntBASIC1.87□□□□□ -2.11
CtcfQ61164 Gm25035-201ENSMUST00000175414 77 ntBASIC1.87□□□□□ -2.11
CtcfQ61164 Gm27517-201ENSMUST00000184347 236 ntBASIC1.87□□□□□ -2.11
CtcfQ61164 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CtcfQ61164 Gm22828-201ENSMUST00000083768 107 ntBASIC1.87□□□□□ -2.11
CtcfQ61164 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CtcfQ61164 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CtcfQ61164 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CtcfQ61164 Gm23772-201ENSMUST00000104433 102 ntBASIC1.86□□□□□ -2.11
CtcfQ61164 Mir873a-201ENSMUST00000104863 77 ntBASIC1.86□□□□□ -2.11
CtcfQ61164 Gm25980-201ENSMUST00000157176 218 ntBASIC1.86□□□□□ -2.11
CtcfQ61164 Gm23080-201ENSMUST00000157846 103 ntBASIC1.86□□□□□ -2.11
CtcfQ61164 Gm22612-201ENSMUST00000158293 101 ntBASIC1.86□□□□□ -2.11
CtcfQ61164 Gm26360-201ENSMUST00000158872 103 ntBASIC1.86□□□□□ -2.11
CtcfQ61164 Mir7679-201ENSMUST00000183379 63 ntBASIC1.86□□□□□ -2.11
CtcfQ61164 Mir6379-201ENSMUST00000183392 115 ntBASIC1.86□□□□□ -2.11
CtcfQ61164 Gm28409-201ENSMUST00000187064 103 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms