Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm22005-201ENSMUST00000082795 141 ntBASIC-1.02□□□□□ -2.57
Trav3-1Q5R1I8 Gm26123-201ENSMUST00000083363 135 ntBASIC-1.02□□□□□ -2.57
Trav3-1Q5R1I8 Gm27047-201ENSMUST00000183072 1819 ntBASIC-1.03□□□□□ -2.57
Trav3-1Q5R1I8 Gm24342-201ENSMUST00000103907 104 ntBASIC-1.03□□□□□ -2.57
Trav3-1Q5R1I8 Gm22966-201ENSMUST00000157957 129 ntBASIC-1.03□□□□□ -2.57
Trav3-1Q5R1I8 Gm26290-201ENSMUST00000158891 145 ntBASIC-1.03□□□□□ -2.57
Trav3-1Q5R1I8 Gm24508-201ENSMUST00000180104 107 ntBASIC-1.03□□□□□ -2.57
Trav3-1Q5R1I8 Mir7651-201ENSMUST00000184154 64 ntBASIC-1.03□□□□□ -2.57
Trav3-1Q5R1I8 Gm28439-201ENSMUST00000187714 876 ntBASIC-1.03□□□□□ -2.57
Trav3-1Q5R1I8 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC-1.03□□□□□ -2.57
Trav3-1Q5R1I8 Gm26203-201ENSMUST00000082911 114 ntBASIC-1.03□□□□□ -2.57
Trav3-1Q5R1I8 Snora62-201ENSMUST00000082991 149 ntBASIC-1.03□□□□□ -2.57
Trav3-1Q5R1I8 Gm13065-201ENSMUST00000119178 141 ntBASIC-1.04□□□□□ -2.58
Trav3-1Q5R1I8 Gm23232-201ENSMUST00000157300 105 ntBASIC-1.04□□□□□ -2.58
Trav3-1Q5R1I8 Gm22447-201ENSMUST00000158155 92 ntBASIC-1.04□□□□□ -2.58
Trav3-1Q5R1I8 Gm25434-201ENSMUST00000158278 167 ntBASIC-1.04□□□□□ -2.58
Trav3-1Q5R1I8 Gm26158-201ENSMUST00000158973 119 ntBASIC-1.04□□□□□ -2.58
Trav3-1Q5R1I8 Gm25241-201ENSMUST00000174909 84 ntBASIC-1.04□□□□□ -2.58
Trav3-1Q5R1I8 Gm26217-201ENSMUST00000175212 84 ntBASIC-1.04□□□□□ -2.58
Trav3-1Q5R1I8 AC159093.2-201ENSMUST00000227881 297 ntBASIC-1.04□□□□□ -2.58
Trav3-1Q5R1I8 AC156574.2-201ENSMUST00000228023 282 ntBASIC-1.04□□□□□ -2.58
Trav3-1Q5R1I8 Gm24490-201ENSMUST00000083803 98 ntBASIC-1.04□□□□□ -2.58
Trav3-1Q5R1I8 Gm23041-201ENSMUST00000083868 106 ntBASIC-1.04□□□□□ -2.58
Trav3-1Q5R1I8 Gm23194-201ENSMUST00000158813 105 ntBASIC-1.05□□□□□ -2.58
Trav3-1Q5R1I8 Gm9593-201ENSMUST00000166034 469 ntBASIC-1.05□□□□□ -2.58
Trav3-1Q5R1I8 Mir7079-201ENSMUST00000184697 69 ntBASIC-1.05□□□□□ -2.58
Trav3-1Q5R1I8 Gm37116-201ENSMUST00000195161 147 ntBASIC-1.05□□□□□ -2.58
Trav3-1Q5R1I8 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-1.05□□□□□ -2.58
Trav3-1Q5R1I8 Gm23404-201ENSMUST00000082543 97 ntBASIC-1.05□□□□□ -2.58
Trav3-1Q5R1I8 Gm22685-201ENSMUST00000082848 106 ntBASIC-1.05□□□□□ -2.58
Trav3-1Q5R1I8 Mir96-201ENSMUST00000083652 106 ntBASIC-1.05□□□□□ -2.58
Trav3-1Q5R1I8 Mir363-201ENSMUST00000093598 75 ntBASIC-1.05□□□□□ -2.58
Trav3-1Q5R1I8 n-R5s8-201ENSMUST00000104121 118 ntBASIC-1.06□□□□□ -2.58
Trav3-1Q5R1I8 Gm22030-201ENSMUST00000116942 63 ntBASIC-1.06□□□□□ -2.58
Trav3-1Q5R1I8 Gm22100-201ENSMUST00000157926 63 ntBASIC-1.06□□□□□ -2.58
Trav3-1Q5R1I8 Mir7009-201ENSMUST00000184519 64 ntBASIC-1.06□□□□□ -2.58
Trav3-1Q5R1I8 Gm38261-201ENSMUST00000192608 316 ntBASIC-1.06□□□□□ -2.58
Trav3-1Q5R1I8 Gm44923-201ENSMUST00000206673 85 ntBASIC-1.06□□□□□ -2.58
Trav3-1Q5R1I8 AC159297.2-201ENSMUST00000219567 1075 ntBASIC-1.06□□□□□ -2.58
Trav3-1Q5R1I8 AC129085.1-201ENSMUST00000225263 165 ntBASIC-1.06□□□□□ -2.58
Trav3-1Q5R1I8 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-1.06□□□□□ -2.58
Trav3-1Q5R1I8 Gm24921-201ENSMUST00000083024 107 ntBASIC-1.06□□□□□ -2.58
Trav3-1Q5R1I8 Gm26384-201ENSMUST00000102183 110 ntBASIC-1.07□□□□□ -2.58
Trav3-1Q5R1I8 Gm14126-201ENSMUST00000122345 395 ntBASIC-1.07□□□□□ -2.58
Trav3-1Q5R1I8 Gm23783-201ENSMUST00000157941 102 ntBASIC-1.07□□□□□ -2.58
Trav3-1Q5R1I8 Snord116l12-201ENSMUST00000179816 94 ntBASIC-1.07□□□□□ -2.58
Trav3-1Q5R1I8 Gm44473-201ENSMUST00000204039 152 ntBASIC-1.07□□□□□ -2.58
Trav3-1Q5R1I8 Snord38a-201ENSMUST00000083746 71 ntBASIC-1.07□□□□□ -2.58
Trav3-1Q5R1I8 Rny1-201ENSMUST00000083767 112 ntBASIC-1.07□□□□□ -2.58
Trav3-1Q5R1I8 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
Trav3-1Q5R1I8 Gm24340-201ENSMUST00000104208 97 ntBASIC-1.08□□□□□ -2.58
Trav3-1Q5R1I8 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC-1.08□□□□□ -2.58
Trav3-1Q5R1I8 Gm22113-201ENSMUST00000158343 104 ntBASIC-1.08□□□□□ -2.58
Trav3-1Q5R1I8 Gm25160-201ENSMUST00000158914 102 ntBASIC-1.08□□□□□ -2.58
Trav3-1Q5R1I8 Gm22631-201ENSMUST00000179656 94 ntBASIC-1.08□□□□□ -2.58
Trav3-1Q5R1I8 Gm38213-201ENSMUST00000193203 173 ntBASIC-1.08□□□□□ -2.58
Trav3-1Q5R1I8 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC-1.08□□□□□ -2.58
Trav3-1Q5R1I8 Gm44338-201ENSMUST00000198614 110 ntBASIC-1.08□□□□□ -2.58
Trav3-1Q5R1I8 Gm44468-201ENSMUST00000199516 105 ntBASIC-1.08□□□□□ -2.58
Trav3-1Q5R1I8 Gm22248-201ENSMUST00000082482 150 ntBASIC-1.08□□□□□ -2.58
Trav3-1Q5R1I8 Gm22509-201ENSMUST00000082775 107 ntBASIC-1.08□□□□□ -2.58
Trav3-1Q5R1I8 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-1.09□□□□□ -2.58
Trav3-1Q5R1I8 Gm24818-201ENSMUST00000175093 161 ntBASIC-1.09□□□□□ -2.58
Trav3-1Q5R1I8 Gm22450-201ENSMUST00000179641 107 ntBASIC-1.09□□□□□ -2.58
Trav3-1Q5R1I8 Gm28767-201ENSMUST00000188601 114 ntBASIC-1.09□□□□□ -2.58
Trav3-1Q5R1I8 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-1.09□□□□□ -2.58
Trav3-1Q5R1I8 Gm38109-201ENSMUST00000195386 181 ntBASIC-1.09□□□□□ -2.58
Trav3-1Q5R1I8 Gm44469-201ENSMUST00000198558 79 ntBASIC-1.09□□□□□ -2.58
Trav3-1Q5R1I8 Gm44057-201ENSMUST00000204547 96 ntBASIC-1.09□□□□□ -2.58
Trav3-1Q5R1I8 AC112972.1-201ENSMUST00000227329 365 ntBASIC-1.09□□□□□ -2.58
Trav3-1Q5R1I8 Gm23614-201ENSMUST00000082598 107 ntBASIC-1.09□□□□□ -2.58
Trav3-1Q5R1I8 Gm22543-201ENSMUST00000104347 94 ntBASIC-1.1□□□□□ -2.59
Trav3-1Q5R1I8 Gm22541-201ENSMUST00000158165 127 ntBASIC-1.1□□□□□ -2.59
Trav3-1Q5R1I8 Gm22387-201ENSMUST00000158191 131 ntBASIC-1.1□□□□□ -2.59
Trav3-1Q5R1I8 Gm23819-201ENSMUST00000158744 109 ntBASIC-1.1□□□□□ -2.59
Trav3-1Q5R1I8 Gm24487-201ENSMUST00000178017 63 ntBASIC-1.1□□□□□ -2.59
Trav3-1Q5R1I8 Gm28011-201ENSMUST00000184097 175 ntBASIC-1.1□□□□□ -2.59
Trav3-1Q5R1I8 Gm18665-201ENSMUST00000189783 270 ntBASIC-1.1□□□□□ -2.59
Trav3-1Q5R1I8 Gm28766-201ENSMUST00000191086 234 ntBASIC-1.1□□□□□ -2.59
Trav3-1Q5R1I8 Gm37338-201ENSMUST00000191986 127 ntBASIC-1.1□□□□□ -2.59
Trav3-1Q5R1I8 Gm24894-201ENSMUST00000122744 118 ntBASIC-1.11□□□□□ -2.59
Trav3-1Q5R1I8 Gm22215-201ENSMUST00000157558 96 ntBASIC-1.11□□□□□ -2.59
Trav3-1Q5R1I8 Gm10548-202ENSMUST00000165672 272 ntBASIC-1.11□□□□□ -2.59
Trav3-1Q5R1I8 Mir5124b-201ENSMUST00000184251 85 ntBASIC-1.11□□□□□ -2.59
Trav3-1Q5R1I8 Gm27540-201ENSMUST00000184950 187 ntBASIC-1.11□□□□□ -2.59
Trav3-1Q5R1I8 Gm38295-201ENSMUST00000191951 151 ntBASIC-1.11□□□□□ -2.59
Trav3-1Q5R1I8 Gm44989-201ENSMUST00000204749 217 ntBASIC-1.11□□□□□ -2.59
Trav3-1Q5R1I8 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC-1.11□□□□□ -2.59
Trav3-1Q5R1I8 Gm18242-201ENSMUST00000218455 542 ntBASIC-1.11□□□□□ -2.59
Trav3-1Q5R1I8 Gm25930-201ENSMUST00000082785 107 ntBASIC-1.11□□□□□ -2.59
Trav3-1Q5R1I8 Gm25756-201ENSMUST00000103990 136 ntBASIC-1.12□□□□□ -2.59
Trav3-1Q5R1I8 Gm23180-201ENSMUST00000158686 125 ntBASIC-1.12□□□□□ -2.59
Trav3-1Q5R1I8 Mir376b-201ENSMUST00000195930 82 ntBASIC-1.12□□□□□ -2.59
Trav3-1Q5R1I8 Gm43563-201ENSMUST00000196761 198 ntBASIC-1.12□□□□□ -2.59
Trav3-1Q5R1I8 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
Trav3-1Q5R1I8 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
Trav3-1Q5R1I8 Gm25040-201ENSMUST00000103877 66 ntBASIC-1.13□□□□□ -2.59
Trav3-1Q5R1I8 Gm23065-201ENSMUST00000158236 130 ntBASIC-1.13□□□□□ -2.59
Trav3-1Q5R1I8 Gm25693-201ENSMUST00000175443 85 ntBASIC-1.13□□□□□ -2.59
Trav3-1Q5R1I8 Gm25472-201ENSMUST00000175454 78 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 76,532 protein–RNA pairs in 133.6 ms