Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm13246-201ENSMUST00000120994 315 ntBASIC-0.39□□□□□ -2.47
Trav5d-4Q5R1F6 Gm25781-201ENSMUST00000122527 84 ntBASIC-0.39□□□□□ -2.47
Trav5d-4Q5R1F6 Gm26415-201ENSMUST00000157673 292 ntBASIC-0.39□□□□□ -2.47
Trav5d-4Q5R1F6 Gm25494-201ENSMUST00000158143 100 ntBASIC-0.39□□□□□ -2.47
Trav5d-4Q5R1F6 Mir6377-201ENSMUST00000183760 114 ntBASIC-0.39□□□□□ -2.47
Trav5d-4Q5R1F6 Gm36189-201ENSMUST00000204113 523 ntBASIC-0.39□□□□□ -2.47
Trav5d-4Q5R1F6 Gm14671-201ENSMUST00000121790 262 ntBASIC-0.4□□□□□ -2.47
Trav5d-4Q5R1F6 Gm22818-201ENSMUST00000157446 104 ntBASIC-0.4□□□□□ -2.47
Trav5d-4Q5R1F6 Gm24288-201ENSMUST00000157630 144 ntBASIC-0.4□□□□□ -2.47
Trav5d-4Q5R1F6 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.4□□□□□ -2.47
Trav5d-4Q5R1F6 Gm44726-201ENSMUST00000203427 217 ntBASIC-0.4□□□□□ -2.47
Trav5d-4Q5R1F6 Gm23404-201ENSMUST00000082543 97 ntBASIC-0.4□□□□□ -2.47
Trav5d-4Q5R1F6 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.4□□□□□ -2.47
Trav5d-4Q5R1F6 Gm25894-201ENSMUST00000083458 75 ntBASIC-0.4□□□□□ -2.47
Trav5d-4Q5R1F6 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.41□□□□□ -2.48
Trav5d-4Q5R1F6 Gm13341-201ENSMUST00000120780 672 ntBASIC-0.41□□□□□ -2.48
Trav5d-4Q5R1F6 Gm25909-201ENSMUST00000157619 121 ntBASIC-0.41□□□□□ -2.48
Trav5d-4Q5R1F6 Gm24853-201ENSMUST00000158026 121 ntBASIC-0.41□□□□□ -2.48
Trav5d-4Q5R1F6 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.41□□□□□ -2.48
Trav5d-4Q5R1F6 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.41□□□□□ -2.48
Trav5d-4Q5R1F6 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.41□□□□□ -2.48
Trav5d-4Q5R1F6 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.41□□□□□ -2.48
Trav5d-4Q5R1F6 Gm44057-201ENSMUST00000204547 96 ntBASIC-0.41□□□□□ -2.48
Trav5d-4Q5R1F6 AC114916.1-201ENSMUST00000228465 494 ntBASIC-0.41□□□□□ -2.48
Trav5d-4Q5R1F6 Gm22753-201ENSMUST00000083657 107 ntBASIC-0.41□□□□□ -2.48
Trav5d-4Q5R1F6 Gm12771-201ENSMUST00000120246 135 ntBASIC-0.42□□□□□ -2.48
Trav5d-4Q5R1F6 Gm23101-201ENSMUST00000157550 137 ntBASIC-0.42□□□□□ -2.48
Trav5d-4Q5R1F6 Gm20409-201ENSMUST00000173457 130 ntBASIC-0.42□□□□□ -2.48
Trav5d-4Q5R1F6 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC-0.42□□□□□ -2.48
Trav5d-4Q5R1F6 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.42□□□□□ -2.48
Trav5d-4Q5R1F6 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.43□□□□□ -2.48
Trav5d-4Q5R1F6 Gm22771-201ENSMUST00000104449 91 ntBASIC-0.43□□□□□ -2.48
Trav5d-4Q5R1F6 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
Trav5d-4Q5R1F6 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.43□□□□□ -2.48
Trav5d-4Q5R1F6 Gm26180-201ENSMUST00000179942 107 ntBASIC-0.43□□□□□ -2.48
Trav5d-4Q5R1F6 Gm27410-201ENSMUST00000183851 115 ntBASIC-0.43□□□□□ -2.48
Trav5d-4Q5R1F6 Gm37330-201ENSMUST00000192606 153 ntBASIC-0.43□□□□□ -2.48
Trav5d-4Q5R1F6 Gm43487-201ENSMUST00000200331 1031 ntBASIC-0.43□□□□□ -2.48
Trav5d-4Q5R1F6 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.43□□□□□ -2.48
Trav5d-4Q5R1F6 AC129085.1-201ENSMUST00000225263 165 ntBASIC-0.43□□□□□ -2.48
Trav5d-4Q5R1F6 Gm25579-201ENSMUST00000083407 106 ntBASIC-0.43□□□□□ -2.48
Trav5d-4Q5R1F6 Gm23142-201ENSMUST00000101848 105 ntBASIC-0.44□□□□□ -2.48
Trav5d-4Q5R1F6 Gm26240-201ENSMUST00000101893 105 ntBASIC-0.44□□□□□ -2.48
Trav5d-4Q5R1F6 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.44□□□□□ -2.48
Trav5d-4Q5R1F6 Gm24847-201ENSMUST00000158032 108 ntBASIC-0.44□□□□□ -2.48
Trav5d-4Q5R1F6 Gm24728-201ENSMUST00000158226 125 ntBASIC-0.44□□□□□ -2.48
Trav5d-4Q5R1F6 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.44□□□□□ -2.48
Trav5d-4Q5R1F6 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC-0.44□□□□□ -2.48
Trav5d-4Q5R1F6 Gm23148-201ENSMUST00000180367 107 ntBASIC-0.44□□□□□ -2.48
Trav5d-4Q5R1F6 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC-0.44□□□□□ -2.48
Trav5d-4Q5R1F6 Gm25258-201ENSMUST00000083049 107 ntBASIC-0.44□□□□□ -2.48
Trav5d-4Q5R1F6 Gm24629-201ENSMUST00000122762 89 ntBASIC-0.45□□□□□ -2.48
Trav5d-4Q5R1F6 Gm23660-201ENSMUST00000178362 79 ntBASIC-0.45□□□□□ -2.48
Trav5d-4Q5R1F6 Gm24088-201ENSMUST00000179100 79 ntBASIC-0.45□□□□□ -2.48
Trav5d-4Q5R1F6 Gm28597-201ENSMUST00000187664 666 ntBASIC-0.45□□□□□ -2.48
Trav5d-4Q5R1F6 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC-0.45□□□□□ -2.48
Trav5d-4Q5R1F6 Gm24509-201ENSMUST00000157086 101 ntBASIC-0.46□□□□□ -2.48
Trav5d-4Q5R1F6 Gm25358-201ENSMUST00000157189 101 ntBASIC-0.46□□□□□ -2.48
Trav5d-4Q5R1F6 Gm25444-201ENSMUST00000158999 113 ntBASIC-0.46□□□□□ -2.48
Trav5d-4Q5R1F6 Gm23921-201ENSMUST00000175258 107 ntBASIC-0.46□□□□□ -2.48
Trav5d-4Q5R1F6 Gm7654-201ENSMUST00000186738 683 ntBASIC-0.46□□□□□ -2.48
Trav5d-4Q5R1F6 Mir7661-201ENSMUST00000197023 61 ntBASIC-0.46□□□□□ -2.48
Trav5d-4Q5R1F6 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC-0.46□□□□□ -2.48
Trav5d-4Q5R1F6 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.46□□□□□ -2.48
Trav5d-4Q5R1F6 Gm23625-201ENSMUST00000082457 100 ntBASIC-0.46□□□□□ -2.48
Trav5d-4Q5R1F6 Gm23301-201ENSMUST00000082713 65 ntBASIC-0.46□□□□□ -2.48
Trav5d-4Q5R1F6 Gm26071-201ENSMUST00000083261 107 ntBASIC-0.46□□□□□ -2.48
Trav5d-4Q5R1F6 Mir18-201ENSMUST00000083469 96 ntBASIC-0.46□□□□□ -2.48
Trav5d-4Q5R1F6 CT030170.3-201ENSMUST00000221205 1815 ntBASIC-0.47□□□□□ -2.48
Trav5d-4Q5R1F6 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.47□□□□□ -2.48
Trav5d-4Q5R1F6 Gm22656-201ENSMUST00000104199 171 ntBASIC-0.47□□□□□ -2.48
Trav5d-4Q5R1F6 Gm26421-201ENSMUST00000104279 132 ntBASIC-0.47□□□□□ -2.48
Trav5d-4Q5R1F6 Gm23466-201ENSMUST00000157133 106 ntBASIC-0.47□□□□□ -2.48
Trav5d-4Q5R1F6 Gm22841-201ENSMUST00000158443 62 ntBASIC-0.47□□□□□ -2.48
Trav5d-4Q5R1F6 Gm25241-201ENSMUST00000174909 84 ntBASIC-0.47□□□□□ -2.48
Trav5d-4Q5R1F6 Gm26217-201ENSMUST00000175212 84 ntBASIC-0.47□□□□□ -2.48
Trav5d-4Q5R1F6 Gm28330-201ENSMUST00000190353 171 ntBASIC-0.47□□□□□ -2.48
Trav5d-4Q5R1F6 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC-0.47□□□□□ -2.48
Trav5d-4Q5R1F6 AC166358.10-201ENSMUST00000220556 144 ntBASIC-0.47□□□□□ -2.48
Trav5d-4Q5R1F6 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
Trav5d-4Q5R1F6 Gm22387-201ENSMUST00000158191 131 ntBASIC-0.48□□□□□ -2.49
Trav5d-4Q5R1F6 Gm10105-201ENSMUST00000184601 270 ntBASIC-0.48□□□□□ -2.49
Trav5d-4Q5R1F6 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC-0.48□□□□□ -2.49
Trav5d-4Q5R1F6 Gm44811-201ENSMUST00000209120 228 ntBASIC-0.48□□□□□ -2.49
Trav5d-4Q5R1F6 Gm24043-201ENSMUST00000083108 116 ntBASIC-0.48□□□□□ -2.49
Trav5d-4Q5R1F6 Mir532-201ENSMUST00000093630 96 ntBASIC-0.48□□□□□ -2.49
Trav5d-4Q5R1F6 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-0.49□□□□□ -2.49
Trav5d-4Q5R1F6 Gm13059-201ENSMUST00000119881 398 ntBASIC-0.49□□□□□ -2.49
Trav5d-4Q5R1F6 Gm24438-201ENSMUST00000157893 115 ntBASIC-0.49□□□□□ -2.49
Trav5d-4Q5R1F6 Gm25671-201ENSMUST00000178612 105 ntBASIC-0.49□□□□□ -2.49
Trav5d-4Q5R1F6 Gm23307-201ENSMUST00000179167 105 ntBASIC-0.49□□□□□ -2.49
Trav5d-4Q5R1F6 Gm25286-201ENSMUST00000179790 105 ntBASIC-0.49□□□□□ -2.49
Trav5d-4Q5R1F6 Gm44464-201ENSMUST00000198010 138 ntBASIC-0.49□□□□□ -2.49
Trav5d-4Q5R1F6 Gm42857-201ENSMUST00000200823 339 ntBASIC-0.49□□□□□ -2.49
Trav5d-4Q5R1F6 AC116589.3-202ENSMUST00000221770 649 ntBASIC-0.49□□□□□ -2.49
Trav5d-4Q5R1F6 AC116589.6-201ENSMUST00000222252 649 ntBASIC-0.49□□□□□ -2.49
Trav5d-4Q5R1F6 Gm25078-201ENSMUST00000082530 107 ntBASIC-0.49□□□□□ -2.49
Trav5d-4Q5R1F6 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.49□□□□□ -2.49
Trav5d-4Q5R1F6 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.49□□□□□ -2.49
Trav5d-4Q5R1F6 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.49□□□□□ -2.49
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms