Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Gm26303-201ENSMUST00000116845 119 ntBASIC0.38□□□□□ -2.35
Clhc1Q5M6W3 Gm24547-201ENSMUST00000158649 149 ntBASIC0.38□□□□□ -2.35
Clhc1Q5M6W3 Gm43563-201ENSMUST00000196761 198 ntBASIC0.38□□□□□ -2.35
Clhc1Q5M6W3 Gm30155-201ENSMUST00000223458 339 ntBASIC0.38□□□□□ -2.35
Clhc1Q5M6W3 Snora19-201ENSMUST00000082962 132 ntBASIC0.38□□□□□ -2.35
Clhc1Q5M6W3 Gm26326-201ENSMUST00000083070 129 ntBASIC0.38□□□□□ -2.35
Clhc1Q5M6W3 Gm22364-201ENSMUST00000083097 98 ntBASIC0.38□□□□□ -2.35
Clhc1Q5M6W3 Gm23658-201ENSMUST00000083233 132 ntBASIC0.38□□□□□ -2.35
Clhc1Q5M6W3 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
Clhc1Q5M6W3 Gm14671-201ENSMUST00000121790 262 ntBASIC0.37□□□□□ -2.35
Clhc1Q5M6W3 Gm25044-201ENSMUST00000158603 104 ntBASIC0.37□□□□□ -2.35
Clhc1Q5M6W3 Gm23008-201ENSMUST00000158946 80 ntBASIC0.37□□□□□ -2.35
Clhc1Q5M6W3 Gm26285-201ENSMUST00000177923 107 ntBASIC0.37□□□□□ -2.35
Clhc1Q5M6W3 Mir6985-201ENSMUST00000184641 61 ntBASIC0.37□□□□□ -2.35
Clhc1Q5M6W3 Gm44458-201ENSMUST00000196594 143 ntBASIC0.37□□□□□ -2.35
Clhc1Q5M6W3 Gm44462-201ENSMUST00000199696 129 ntBASIC0.37□□□□□ -2.35
Clhc1Q5M6W3 Gm44959-201ENSMUST00000209127 231 ntBASIC0.37□□□□□ -2.35
Clhc1Q5M6W3 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.37□□□□□ -2.35
Clhc1Q5M6W3 Gm23622-201ENSMUST00000082460 107 ntBASIC0.37□□□□□ -2.35
Clhc1Q5M6W3 Mir759-201ENSMUST00000103254 98 ntBASIC0.36□□□□□ -2.35
Clhc1Q5M6W3 Gm25878-201ENSMUST00000104327 93 ntBASIC0.36□□□□□ -2.35
Clhc1Q5M6W3 Gm38183-201ENSMUST00000193189 205 ntBASIC0.36□□□□□ -2.35
Clhc1Q5M6W3 Gm45471-201ENSMUST00000211270 281 ntBASIC0.36□□□□□ -2.35
Clhc1Q5M6W3 Snora20-201ENSMUST00000082703 128 ntBASIC0.36□□□□□ -2.35
Clhc1Q5M6W3 Gm24204-201ENSMUST00000082950 107 ntBASIC0.36□□□□□ -2.35
Clhc1Q5M6W3 Gm23321-201ENSMUST00000104465 126 ntBASIC0.35□□□□□ -2.35
Clhc1Q5M6W3 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC0.35□□□□□ -2.35
Clhc1Q5M6W3 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
Clhc1Q5M6W3 Gm12771-201ENSMUST00000120246 135 ntBASIC0.35□□□□□ -2.35
Clhc1Q5M6W3 Gm26479-201ENSMUST00000122620 106 ntBASIC0.35□□□□□ -2.35
Clhc1Q5M6W3 Gm25393-201ENSMUST00000157336 285 ntBASIC0.35□□□□□ -2.35
Clhc1Q5M6W3 Gm27723-201ENSMUST00000157398 63 ntBASIC0.35□□□□□ -2.35
Clhc1Q5M6W3 Gm23672-201ENSMUST00000157471 107 ntBASIC0.35□□□□□ -2.35
Clhc1Q5M6W3 Gm22553-201ENSMUST00000157797 295 ntBASIC0.35□□□□□ -2.35
Clhc1Q5M6W3 Gm22097-201ENSMUST00000157929 278 ntBASIC0.35□□□□□ -2.35
Clhc1Q5M6W3 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.35□□□□□ -2.35
Clhc1Q5M6W3 AC166341.3-201ENSMUST00000221861 114 ntBASIC0.35□□□□□ -2.35
Clhc1Q5M6W3 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.35□□□□□ -2.35
Clhc1Q5M6W3 Mir30a-201ENSMUST00000083471 71 ntBASIC0.35□□□□□ -2.35
Clhc1Q5M6W3 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.35□□□□□ -2.35
Clhc1Q5M6W3 Gm24171-201ENSMUST00000104126 131 ntBASIC0.34□□□□□ -2.36
Clhc1Q5M6W3 Gm24275-201ENSMUST00000116780 146 ntBASIC0.34□□□□□ -2.36
Clhc1Q5M6W3 Gm14884-201ENSMUST00000120456 196 ntBASIC0.34□□□□□ -2.36
Clhc1Q5M6W3 Gm6272-201ENSMUST00000121256 171 ntBASIC0.34□□□□□ -2.36
Clhc1Q5M6W3 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC0.34□□□□□ -2.36
Clhc1Q5M6W3 Gm44211-201ENSMUST00000204867 145 ntBASIC0.34□□□□□ -2.36
Clhc1Q5M6W3 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
Clhc1Q5M6W3 Gm22759-201ENSMUST00000102276 96 ntBASIC0.33□□□□□ -2.36
Clhc1Q5M6W3 Gm22469-201ENSMUST00000104118 133 ntBASIC0.33□□□□□ -2.36
Clhc1Q5M6W3 Gm22387-201ENSMUST00000158191 131 ntBASIC0.33□□□□□ -2.36
Clhc1Q5M6W3 Gm22118-201ENSMUST00000175593 171 ntBASIC0.33□□□□□ -2.36
Clhc1Q5M6W3 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC0.33□□□□□ -2.36
Clhc1Q5M6W3 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.33□□□□□ -2.36
Clhc1Q5M6W3 Gm25814-201ENSMUST00000082754 107 ntBASIC0.33□□□□□ -2.36
Clhc1Q5M6W3 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.33□□□□□ -2.36
Clhc1Q5M6W3 Gm13725-201ENSMUST00000122139 207 ntBASIC0.32□□□□□ -2.36
Clhc1Q5M6W3 Gm22984-201ENSMUST00000122751 122 ntBASIC0.32□□□□□ -2.36
Clhc1Q5M6W3 Gm22983-201ENSMUST00000158308 104 ntBASIC0.32□□□□□ -2.36
Clhc1Q5M6W3 Gm23375-201ENSMUST00000175407 83 ntBASIC0.32□□□□□ -2.36
Clhc1Q5M6W3 Gm23416-201ENSMUST00000175520 95 ntBASIC0.32□□□□□ -2.36
Clhc1Q5M6W3 Gm45673-201ENSMUST00000210293 358 ntBASIC0.32□□□□□ -2.36
Clhc1Q5M6W3 AC164117.2-201ENSMUST00000222090 327 ntBASIC0.32□□□□□ -2.36
Clhc1Q5M6W3 Mir344-201ENSMUST00000083634 95 ntBASIC0.32□□□□□ -2.36
Clhc1Q5M6W3 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC0.31□□□□□ -2.36
Clhc1Q5M6W3 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.31□□□□□ -2.36
Clhc1Q5M6W3 Gm26152-201ENSMUST00000157427 101 ntBASIC0.31□□□□□ -2.36
Clhc1Q5M6W3 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.31□□□□□ -2.36
Clhc1Q5M6W3 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC0.31□□□□□ -2.36
Clhc1Q5M6W3 Gm24476-201ENSMUST00000157437 131 ntBASIC0.3□□□□□ -2.36
Clhc1Q5M6W3 Gm16307-201ENSMUST00000161269 210 ntBASIC0.3□□□□□ -2.36
Clhc1Q5M6W3 Gm22887-201ENSMUST00000178586 107 ntBASIC0.3□□□□□ -2.36
Clhc1Q5M6W3 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC0.3□□□□□ -2.36
Clhc1Q5M6W3 Gm37997-201ENSMUST00000193515 267 ntBASIC0.3□□□□□ -2.36
Clhc1Q5M6W3 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.3□□□□□ -2.36
Clhc1Q5M6W3 Gm44828-201ENSMUST00000203745 106 ntBASIC0.3□□□□□ -2.36
Clhc1Q5M6W3 Gm23969-201ENSMUST00000083324 74 ntBASIC0.3□□□□□ -2.36
Clhc1Q5M6W3 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.3□□□□□ -2.36
Clhc1Q5M6W3 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.29□□□□□ -2.36
Clhc1Q5M6W3 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
Clhc1Q5M6W3 Snord69-201ENSMUST00000104024 80 ntBASIC0.29□□□□□ -2.36
Clhc1Q5M6W3 Gm15289-201ENSMUST00000117793 244 ntBASIC0.29□□□□□ -2.36
Clhc1Q5M6W3 Gm15030-201ENSMUST00000119804 484 ntBASIC0.29□□□□□ -2.36
Clhc1Q5M6W3 Gm22706-201ENSMUST00000157907 112 ntBASIC0.29□□□□□ -2.36
Clhc1Q5M6W3 Gm26194-201ENSMUST00000175036 71 ntBASIC0.29□□□□□ -2.36
Clhc1Q5M6W3 Gm36189-201ENSMUST00000204113 523 ntBASIC0.29□□□□□ -2.36
Clhc1Q5M6W3 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.29□□□□□ -2.36
Clhc1Q5M6W3 Gm22149-201ENSMUST00000104442 136 ntBASIC0.28□□□□□ -2.36
Clhc1Q5M6W3 Gm13246-201ENSMUST00000120994 315 ntBASIC0.28□□□□□ -2.36
Clhc1Q5M6W3 Gm25318-201ENSMUST00000122554 314 ntBASIC0.28□□□□□ -2.36
Clhc1Q5M6W3 Gm25882-201ENSMUST00000157784 85 ntBASIC0.28□□□□□ -2.36
Clhc1Q5M6W3 Gm25300-201ENSMUST00000175284 84 ntBASIC0.28□□□□□ -2.36
Clhc1Q5M6W3 Gm26116-201ENSMUST00000175600 77 ntBASIC0.28□□□□□ -2.36
Clhc1Q5M6W3 Mir6905-201ENSMUST00000184228 70 ntBASIC0.28□□□□□ -2.36
Clhc1Q5M6W3 Gm38109-201ENSMUST00000195386 181 ntBASIC0.28□□□□□ -2.36
Clhc1Q5M6W3 Gm19572-201ENSMUST00000214326 338 ntBASIC0.28□□□□□ -2.36
Clhc1Q5M6W3 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.28□□□□□ -2.36
Clhc1Q5M6W3 Rny1-201ENSMUST00000083767 112 ntBASIC0.28□□□□□ -2.36
Clhc1Q5M6W3 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.28□□□□□ -2.37
Clhc1Q5M6W3 Gm25241-201ENSMUST00000174909 84 ntBASIC0.27□□□□□ -2.37
Clhc1Q5M6W3 Gm26217-201ENSMUST00000175212 84 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms