Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 mt-Tc-201ENSMUST00000082400 66 ntBASIC-1.88□□□□□ -2.71
Ccdc88bQ4QRL3 Mir1191-201ENSMUST00000116883 120 ntBASIC-1.89□□□□□ -2.71
Ccdc88bQ4QRL3 Gm22332-201ENSMUST00000158072 126 ntBASIC-1.89□□□□□ -2.71
Ccdc88bQ4QRL3 Mir6350-201ENSMUST00000183639 105 ntBASIC-1.89□□□□□ -2.71
Ccdc88bQ4QRL3 Gm28766-201ENSMUST00000191086 234 ntBASIC-1.89□□□□□ -2.71
Ccdc88bQ4QRL3 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC-1.89□□□□□ -2.71
Ccdc88bQ4QRL3 Gm23691-201ENSMUST00000101878 107 ntBASIC-1.9□□□□□ -2.71
Ccdc88bQ4QRL3 Gm27817-201ENSMUST00000184302 233 ntBASIC-1.9□□□□□ -2.71
Ccdc88bQ4QRL3 Gm28767-201ENSMUST00000188601 114 ntBASIC-1.9□□□□□ -2.71
Ccdc88bQ4QRL3 Gm37918-201ENSMUST00000192071 120 ntBASIC-1.9□□□□□ -2.71
Ccdc88bQ4QRL3 Gm44473-201ENSMUST00000204039 152 ntBASIC-1.9□□□□□ -2.71
Ccdc88bQ4QRL3 Gm44464-201ENSMUST00000198010 138 ntBASIC-1.91□□□□□ -2.72
Ccdc88bQ4QRL3 Gm26446-201ENSMUST00000082455 103 ntBASIC-1.91□□□□□ -2.72
Ccdc88bQ4QRL3 Snord60-201ENSMUST00000082834 78 ntBASIC-1.91□□□□□ -2.72
Ccdc88bQ4QRL3 Gm25647-201ENSMUST00000101832 78 ntBASIC-1.92□□□□□ -2.72
Ccdc88bQ4QRL3 Gm25823-201ENSMUST00000101995 78 ntBASIC-1.92□□□□□ -2.72
Ccdc88bQ4QRL3 Gm23744-201ENSMUST00000104231 149 ntBASIC-1.92□□□□□ -2.72
Ccdc88bQ4QRL3 Gm14931-201ENSMUST00000111079 253 ntBASIC-1.92□□□□□ -2.72
Ccdc88bQ4QRL3 Gm15175-201ENSMUST00000117629 132 ntBASIC-1.92□□□□□ -2.72
Ccdc88bQ4QRL3 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.92□□□□□ -2.72
Ccdc88bQ4QRL3 Gm25432-201ENSMUST00000158284 66 ntBASIC-1.92□□□□□ -2.72
Ccdc88bQ4QRL3 Gm24220-201ENSMUST00000177753 79 ntBASIC-1.92□□□□□ -2.72
Ccdc88bQ4QRL3 Gm25988-201ENSMUST00000177759 79 ntBASIC-1.92□□□□□ -2.72
Ccdc88bQ4QRL3 Gm23471-201ENSMUST00000177886 79 ntBASIC-1.92□□□□□ -2.72
Ccdc88bQ4QRL3 Gm26488-201ENSMUST00000178225 79 ntBASIC-1.92□□□□□ -2.72
Ccdc88bQ4QRL3 Gm23449-201ENSMUST00000179208 79 ntBASIC-1.92□□□□□ -2.72
Ccdc88bQ4QRL3 Gm25221-201ENSMUST00000180051 79 ntBASIC-1.92□□□□□ -2.72
Ccdc88bQ4QRL3 AC150901.1-201ENSMUST00000208407 145 ntBASIC-1.92□□□□□ -2.72
Ccdc88bQ4QRL3 AC116589.7-201ENSMUST00000221061 239 ntBASIC-1.92□□□□□ -2.72
Ccdc88bQ4QRL3 AC164117.1-201ENSMUST00000221726 239 ntBASIC-1.92□□□□□ -2.72
Ccdc88bQ4QRL3 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC-1.93□□□□□ -2.72
Ccdc88bQ4QRL3 Gm24649-201ENSMUST00000157106 134 ntBASIC-1.93□□□□□ -2.72
Ccdc88bQ4QRL3 Snord116l14-201ENSMUST00000179875 94 ntBASIC-1.93□□□□□ -2.72
Ccdc88bQ4QRL3 Gm42622-201ENSMUST00000197229 355 ntBASIC-1.93□□□□□ -2.72
Ccdc88bQ4QRL3 Gm25651-201ENSMUST00000083782 119 ntBASIC-1.93□□□□□ -2.72
Ccdc88bQ4QRL3 Gm26255-201ENSMUST00000122492 103 ntBASIC-1.94□□□□□ -2.72
Ccdc88bQ4QRL3 Gm22145-201ENSMUST00000157396 148 ntBASIC-1.94□□□□□ -2.72
Ccdc88bQ4QRL3 Gm23032-201ENSMUST00000157995 107 ntBASIC-1.94□□□□□ -2.72
Ccdc88bQ4QRL3 Gm26217-201ENSMUST00000175212 84 ntBASIC-1.94□□□□□ -2.72
Ccdc88bQ4QRL3 Gm36984-201ENSMUST00000192770 235 ntBASIC-1.94□□□□□ -2.72
Ccdc88bQ4QRL3 Gm37438-201ENSMUST00000192813 393 ntBASIC-1.94□□□□□ -2.72
Ccdc88bQ4QRL3 Gm29848-201ENSMUST00000203107 295 ntBASIC-1.94□□□□□ -2.72
Ccdc88bQ4QRL3 AC124346.1-201ENSMUST00000218539 364 ntBASIC-1.94□□□□□ -2.72
Ccdc88bQ4QRL3 Gm24030-201ENSMUST00000083931 164 ntBASIC-1.94□□□□□ -2.72
Ccdc88bQ4QRL3 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.94□□□□□ -2.72
Ccdc88bQ4QRL3 Mir543-201ENSMUST00000102286 76 ntBASIC-1.94□□□□□ -2.72
Ccdc88bQ4QRL3 Gm23892-201ENSMUST00000158105 130 ntBASIC-1.94□□□□□ -2.72
Ccdc88bQ4QRL3 Gm25771-201ENSMUST00000158565 144 ntBASIC-1.94□□□□□ -2.72
Ccdc88bQ4QRL3 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC-1.94□□□□□ -2.72
Ccdc88bQ4QRL3 Gm26238-201ENSMUST00000175538 117 ntBASIC-1.94□□□□□ -2.72
Ccdc88bQ4QRL3 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC-1.94□□□□□ -2.72
Ccdc88bQ4QRL3 Gm43026-201ENSMUST00000202972 325 ntBASIC-1.94□□□□□ -2.72
Ccdc88bQ4QRL3 Gm6369-201ENSMUST00000069626 412 ntBASIC-1.94□□□□□ -2.72
Ccdc88bQ4QRL3 Snord45b-201ENSMUST00000082797 71 ntBASIC-1.94□□□□□ -2.72
Ccdc88bQ4QRL3 Gm14536-201ENSMUST00000118324 138 ntBASIC-1.95□□□□□ -2.72
Ccdc88bQ4QRL3 Gm15027-201ENSMUST00000120922 138 ntBASIC-1.95□□□□□ -2.72
Ccdc88bQ4QRL3 Gm43381-201ENSMUST00000198553 165 ntBASIC-1.95□□□□□ -2.72
Ccdc88bQ4QRL3 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC-1.95□□□□□ -2.72
Ccdc88bQ4QRL3 AC173345.2-201ENSMUST00000222795 153 ntBASIC-1.95□□□□□ -2.72
Ccdc88bQ4QRL3 AC144733.1-201ENSMUST00000222893 1289 ntBASIC-1.95□□□□□ -2.72
Ccdc88bQ4QRL3 AC183092.1-201ENSMUST00000224301 153 ntBASIC-1.95□□□□□ -2.72
Ccdc88bQ4QRL3 Mir10a-201ENSMUST00000083585 110 ntBASIC-1.95□□□□□ -2.72
Ccdc88bQ4QRL3 Gm23113-201ENSMUST00000158477 99 ntBASIC-1.96□□□□□ -2.72
Ccdc88bQ4QRL3 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC-1.96□□□□□ -2.72
Ccdc88bQ4QRL3 Gm27749-201ENSMUST00000183651 125 ntBASIC-1.96□□□□□ -2.72
Ccdc88bQ4QRL3 Gm25186-201ENSMUST00000083909 108 ntBASIC-1.96□□□□□ -2.72
Ccdc88bQ4QRL3 Gm13725-201ENSMUST00000122139 207 ntBASIC-1.97□□□□□ -2.72
Ccdc88bQ4QRL3 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC-1.97□□□□□ -2.72
Ccdc88bQ4QRL3 Gm44960-201ENSMUST00000207403 141 ntBASIC-1.97□□□□□ -2.72
Ccdc88bQ4QRL3 AC069561.2-201ENSMUST00000217596 420 ntBASIC-1.97□□□□□ -2.72
Ccdc88bQ4QRL3 Gm23232-201ENSMUST00000157300 105 ntBASIC-1.98□□□□□ -2.73
Ccdc88bQ4QRL3 Gm22553-201ENSMUST00000157797 295 ntBASIC-1.98□□□□□ -2.73
Ccdc88bQ4QRL3 Gm22732-201ENSMUST00000158093 121 ntBASIC-1.98□□□□□ -2.73
Ccdc88bQ4QRL3 Gm22542-201ENSMUST00000158166 95 ntBASIC-1.98□□□□□ -2.73
Ccdc88bQ4QRL3 Gm27540-201ENSMUST00000184950 187 ntBASIC-1.98□□□□□ -2.73
Ccdc88bQ4QRL3 Gm45544-201ENSMUST00000211130 88 ntBASIC-1.98□□□□□ -2.73
Ccdc88bQ4QRL3 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC-1.98□□□□□ -2.73
Ccdc88bQ4QRL3 Gm26203-201ENSMUST00000082911 114 ntBASIC-1.98□□□□□ -2.73
Ccdc88bQ4QRL3 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC-1.99□□□□□ -2.73
Ccdc88bQ4QRL3 Gm12105-201ENSMUST00000120846 779 ntBASIC-1.99□□□□□ -2.73
Ccdc88bQ4QRL3 Gm16358-201ENSMUST00000146046 210 ntBASIC-1.99□□□□□ -2.73
Ccdc88bQ4QRL3 Gm25225-201ENSMUST00000158197 102 ntBASIC-1.99□□□□□ -2.73
Ccdc88bQ4QRL3 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC-1.99□□□□□ -2.73
Ccdc88bQ4QRL3 Gm25473-201ENSMUST00000180191 107 ntBASIC-1.99□□□□□ -2.73
Ccdc88bQ4QRL3 Gm28288-201ENSMUST00000191019 214 ntBASIC-1.99□□□□□ -2.73
Ccdc88bQ4QRL3 Gm38019-201ENSMUST00000195133 380 ntBASIC-1.99□□□□□ -2.73
Ccdc88bQ4QRL3 Gm43927-201ENSMUST00000204599 117 ntBASIC-1.99□□□□□ -2.73
Ccdc88bQ4QRL3 Gm24377-201ENSMUST00000104398 131 ntBASIC-2□□□□□ -2.73
Ccdc88bQ4QRL3 Gm16359-201ENSMUST00000124511 289 ntBASIC-2□□□□□ -2.73
Ccdc88bQ4QRL3 Gm25622-201ENSMUST00000157217 104 ntBASIC-2□□□□□ -2.73
Ccdc88bQ4QRL3 Gm25384-201ENSMUST00000157807 105 ntBASIC-2□□□□□ -2.73
Ccdc88bQ4QRL3 Gm44063-201ENSMUST00000203307 376 ntBASIC-2□□□□□ -2.73
Ccdc88bQ4QRL3 CT009550.5-201ENSMUST00000226286 382 ntBASIC-2□□□□□ -2.73
Ccdc88bQ4QRL3 Gm22805-201ENSMUST00000082739 107 ntBASIC-2□□□□□ -2.73
Ccdc88bQ4QRL3 Gm23308-201ENSMUST00000179475 107 ntBASIC-2.01□□□□□ -2.73
Ccdc88bQ4QRL3 Gm24137-201ENSMUST00000180055 79 ntBASIC-2.01□□□□□ -2.73
Ccdc88bQ4QRL3 Gm22391-201ENSMUST00000180356 79 ntBASIC-2.01□□□□□ -2.73
Ccdc88bQ4QRL3 Gm23848-201ENSMUST00000083826 106 ntBASIC-2.01□□□□□ -2.73
Ccdc88bQ4QRL3 Gm11388-201ENSMUST00000120908 159 ntBASIC-2.01□□□□□ -2.73
Ccdc88bQ4QRL3 AC125311.1-201ENSMUST00000226950 220 ntBASIC-2.01□□□□□ -2.73
Retrieved 100 of 76,532 protein–RNA pairs in 157 ms