Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Mir669o-201ENSMUST00000103898 96 ntBASIC0.84□□□□□ -2.27
Upf3aQ3ULJ3 Gm22784-201ENSMUST00000104088 132 ntBASIC0.84□□□□□ -2.27
Upf3aQ3ULJ3 Gm24392-201ENSMUST00000158136 103 ntBASIC0.84□□□□□ -2.27
Upf3aQ3ULJ3 Mir1931-201ENSMUST00000158589 119 ntBASIC0.84□□□□□ -2.27
Upf3aQ3ULJ3 Gm22888-201ENSMUST00000158640 77 ntBASIC0.84□□□□□ -2.27
Upf3aQ3ULJ3 Gm24667-201ENSMUST00000158938 103 ntBASIC0.84□□□□□ -2.27
Upf3aQ3ULJ3 Gm20391-201ENSMUST00000174722 106 ntBASIC0.84□□□□□ -2.27
Upf3aQ3ULJ3 Gm27545-201ENSMUST00000184755 202 ntBASIC0.84□□□□□ -2.27
Upf3aQ3ULJ3 Gm28862-201ENSMUST00000188246 163 ntBASIC0.84□□□□□ -2.27
Upf3aQ3ULJ3 Gm44301-201ENSMUST00000200362 143 ntBASIC0.84□□□□□ -2.27
Upf3aQ3ULJ3 AC125374.2-201ENSMUST00000214278 162 ntBASIC0.84□□□□□ -2.27
Upf3aQ3ULJ3 Gm24460-201ENSMUST00000082731 106 ntBASIC0.84□□□□□ -2.27
Upf3aQ3ULJ3 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.84□□□□□ -2.27
Upf3aQ3ULJ3 Gm13711-201ENSMUST00000119708 453 ntBASIC0.83□□□□□ -2.28
Upf3aQ3ULJ3 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Upf3aQ3ULJ3 Gm26358-201ENSMUST00000158215 97 ntBASIC0.83□□□□□ -2.28
Upf3aQ3ULJ3 Gm26402-201ENSMUST00000158499 113 ntBASIC0.83□□□□□ -2.28
Upf3aQ3ULJ3 Gm22802-201ENSMUST00000175621 89 ntBASIC0.83□□□□□ -2.28
Upf3aQ3ULJ3 Gm27905-201ENSMUST00000184005 207 ntBASIC0.83□□□□□ -2.28
Upf3aQ3ULJ3 Gm44358-201ENSMUST00000196301 98 ntBASIC0.83□□□□□ -2.28
Upf3aQ3ULJ3 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC0.83□□□□□ -2.28
Upf3aQ3ULJ3 Gm44563-201ENSMUST00000207958 178 ntBASIC0.83□□□□□ -2.28
Upf3aQ3ULJ3 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.83□□□□□ -2.28
Upf3aQ3ULJ3 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.83□□□□□ -2.28
Upf3aQ3ULJ3 Gm24423-201ENSMUST00000101982 106 ntBASIC0.82□□□□□ -2.28
Upf3aQ3ULJ3 Gm22689-201ENSMUST00000102452 110 ntBASIC0.82□□□□□ -2.28
Upf3aQ3ULJ3 Gm24579-201ENSMUST00000103964 144 ntBASIC0.82□□□□□ -2.28
Upf3aQ3ULJ3 Gm14792-201ENSMUST00000119725 258 ntBASIC0.82□□□□□ -2.28
Upf3aQ3ULJ3 Gm12837-201ENSMUST00000120131 373 ntBASIC0.82□□□□□ -2.28
Upf3aQ3ULJ3 Gm13801-201ENSMUST00000120750 160 ntBASIC0.82□□□□□ -2.28
Upf3aQ3ULJ3 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.82□□□□□ -2.28
Upf3aQ3ULJ3 Gm24909-201ENSMUST00000157290 280 ntBASIC0.82□□□□□ -2.28
Upf3aQ3ULJ3 Gm25424-201ENSMUST00000157612 58 ntBASIC0.82□□□□□ -2.28
Upf3aQ3ULJ3 Gm26482-201ENSMUST00000158015 62 ntBASIC0.82□□□□□ -2.28
Upf3aQ3ULJ3 Gm25011-201ENSMUST00000158398 126 ntBASIC0.82□□□□□ -2.28
Upf3aQ3ULJ3 Gm24323-201ENSMUST00000175342 77 ntBASIC0.82□□□□□ -2.28
Upf3aQ3ULJ3 Gm25235-201ENSMUST00000179933 107 ntBASIC0.82□□□□□ -2.28
Upf3aQ3ULJ3 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
Upf3aQ3ULJ3 Gm23451-201ENSMUST00000083328 122 ntBASIC0.82□□□□□ -2.28
Upf3aQ3ULJ3 Gm25650-201ENSMUST00000083784 162 ntBASIC0.82□□□□□ -2.28
Upf3aQ3ULJ3 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.82□□□□□ -2.28
Upf3aQ3ULJ3 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.81□□□□□ -2.28
Upf3aQ3ULJ3 Gm23219-201ENSMUST00000158123 87 ntBASIC0.81□□□□□ -2.28
Upf3aQ3ULJ3 Gm38183-201ENSMUST00000193189 205 ntBASIC0.81□□□□□ -2.28
Upf3aQ3ULJ3 Mir3970-201ENSMUST00000199287 90 ntBASIC0.81□□□□□ -2.28
Upf3aQ3ULJ3 Gm44977-201ENSMUST00000205283 420 ntBASIC0.81□□□□□ -2.28
Upf3aQ3ULJ3 Gm23140-201ENSMUST00000082487 107 ntBASIC0.81□□□□□ -2.28
Upf3aQ3ULJ3 Gm25851-201ENSMUST00000082794 107 ntBASIC0.81□□□□□ -2.28
Upf3aQ3ULJ3 Gm23679-201ENSMUST00000083161 119 ntBASIC0.81□□□□□ -2.28
Upf3aQ3ULJ3 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Upf3aQ3ULJ3 Gm22544-201ENSMUST00000104349 127 ntBASIC0.8□□□□□ -2.28
Upf3aQ3ULJ3 Mir880-201ENSMUST00000104809 78 ntBASIC0.8□□□□□ -2.28
Upf3aQ3ULJ3 Gm22553-201ENSMUST00000157797 295 ntBASIC0.8□□□□□ -2.28
Upf3aQ3ULJ3 Gm44052-201ENSMUST00000203382 396 ntBASIC0.8□□□□□ -2.28
Upf3aQ3ULJ3 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.8□□□□□ -2.28
Upf3aQ3ULJ3 Gm45508-201ENSMUST00000209298 299 ntBASIC0.8□□□□□ -2.28
Upf3aQ3ULJ3 Gm25855-201ENSMUST00000082787 72 ntBASIC0.8□□□□□ -2.28
Upf3aQ3ULJ3 Gm22515-201ENSMUST00000158273 305 ntBASIC0.79□□□□□ -2.28
Upf3aQ3ULJ3 Gm23114-201ENSMUST00000158478 117 ntBASIC0.79□□□□□ -2.28
Upf3aQ3ULJ3 Gm20630-201ENSMUST00000177387 551 ntBASIC0.79□□□□□ -2.28
Upf3aQ3ULJ3 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.79□□□□□ -2.28
Upf3aQ3ULJ3 Mir219b-201ENSMUST00000198317 65 ntBASIC0.79□□□□□ -2.28
Upf3aQ3ULJ3 Gm44396-201ENSMUST00000199843 114 ntBASIC0.79□□□□□ -2.28
Upf3aQ3ULJ3 Gm44057-201ENSMUST00000204547 96 ntBASIC0.79□□□□□ -2.28
Upf3aQ3ULJ3 Gm23735-201ENSMUST00000082551 134 ntBASIC0.79□□□□□ -2.28
Upf3aQ3ULJ3 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Upf3aQ3ULJ3 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.78□□□□□ -2.28
Upf3aQ3ULJ3 Gm25558-201ENSMUST00000158083 106 ntBASIC0.78□□□□□ -2.28
Upf3aQ3ULJ3 Mir6336-201ENSMUST00000183581 130 ntBASIC0.78□□□□□ -2.28
Upf3aQ3ULJ3 Gm38019-201ENSMUST00000195133 380 ntBASIC0.78□□□□□ -2.28
Upf3aQ3ULJ3 Gm44326-201ENSMUST00000198226 101 ntBASIC0.78□□□□□ -2.28
Upf3aQ3ULJ3 Gm19572-201ENSMUST00000214326 338 ntBASIC0.78□□□□□ -2.28
Upf3aQ3ULJ3 Gm22704-201ENSMUST00000083027 137 ntBASIC0.78□□□□□ -2.28
Upf3aQ3ULJ3 Mir181b-2-201ENSMUST00000083644 89 ntBASIC0.78□□□□□ -2.28
Upf3aQ3ULJ3 Gm24271-201ENSMUST00000102327 111 ntBASIC0.77□□□□□ -2.29
Upf3aQ3ULJ3 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.77□□□□□ -2.29
Upf3aQ3ULJ3 Gm20386-201ENSMUST00000174010 132 ntBASIC0.77□□□□□ -2.29
Upf3aQ3ULJ3 Gm23002-201ENSMUST00000179221 107 ntBASIC0.77□□□□□ -2.29
Upf3aQ3ULJ3 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.77□□□□□ -2.29
Upf3aQ3ULJ3 Mir654-201ENSMUST00000104787 84 ntBASIC0.76□□□□□ -2.29
Upf3aQ3ULJ3 Gm11388-201ENSMUST00000120908 159 ntBASIC0.76□□□□□ -2.29
Upf3aQ3ULJ3 Gm13797-201ENSMUST00000121792 120 ntBASIC0.76□□□□□ -2.29
Upf3aQ3ULJ3 Gm24000-201ENSMUST00000158063 89 ntBASIC0.76□□□□□ -2.29
Upf3aQ3ULJ3 Gm24006-201ENSMUST00000158462 132 ntBASIC0.76□□□□□ -2.29
Upf3aQ3ULJ3 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.76□□□□□ -2.29
Upf3aQ3ULJ3 Mir6350-201ENSMUST00000183639 105 ntBASIC0.76□□□□□ -2.29
Upf3aQ3ULJ3 Gm28669-201ENSMUST00000188400 100 ntBASIC0.76□□□□□ -2.29
Upf3aQ3ULJ3 Gm38323-201ENSMUST00000192450 210 ntBASIC0.76□□□□□ -2.29
Upf3aQ3ULJ3 Gm43898-201ENSMUST00000204456 424 ntBASIC0.76□□□□□ -2.29
Upf3aQ3ULJ3 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.76□□□□□ -2.29
Upf3aQ3ULJ3 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.75□□□□□ -2.29
Upf3aQ3ULJ3 Gm25538-201ENSMUST00000101943 107 ntBASIC0.75□□□□□ -2.29
Upf3aQ3ULJ3 Gm23126-201ENSMUST00000104260 134 ntBASIC0.75□□□□□ -2.29
Upf3aQ3ULJ3 Gm23321-201ENSMUST00000104465 126 ntBASIC0.75□□□□□ -2.29
Upf3aQ3ULJ3 Gm25787-201ENSMUST00000104709 92 ntBASIC0.75□□□□□ -2.29
Upf3aQ3ULJ3 Gm14883-201ENSMUST00000120179 157 ntBASIC0.75□□□□□ -2.29
Upf3aQ3ULJ3 Gm25949-201ENSMUST00000175333 114 ntBASIC0.75□□□□□ -2.29
Upf3aQ3ULJ3 Gm26073-201ENSMUST00000179906 127 ntBASIC0.75□□□□□ -2.29
Upf3aQ3ULJ3 Gm29490-201ENSMUST00000190923 342 ntBASIC0.75□□□□□ -2.29
Upf3aQ3ULJ3 Gm25142-201ENSMUST00000082698 107 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms