Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm22663-201ENSMUST00000158721 102 ntBASIC1.12□□□□□ -2.23
Trafd1Q3UDK1 Gm25749-201ENSMUST00000175485 111 ntBASIC1.12□□□□□ -2.23
Trafd1Q3UDK1 Gm20630-201ENSMUST00000177387 551 ntBASIC1.12□□□□□ -2.23
Trafd1Q3UDK1 Gm26426-201ENSMUST00000177866 123 ntBASIC1.12□□□□□ -2.23
Trafd1Q3UDK1 Gm26060-201ENSMUST00000180094 123 ntBASIC1.12□□□□□ -2.23
Trafd1Q3UDK1 Mir8119-201ENSMUST00000183371 129 ntBASIC1.12□□□□□ -2.23
Trafd1Q3UDK1 Gm44052-201ENSMUST00000203382 396 ntBASIC1.12□□□□□ -2.23
Trafd1Q3UDK1 Snord14a-201ENSMUST00000082807 87 ntBASIC1.12□□□□□ -2.23
Trafd1Q3UDK1 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Trafd1Q3UDK1 Snord19-201ENSMUST00000104609 76 ntBASIC1.11□□□□□ -2.23
Trafd1Q3UDK1 Gm11334-201ENSMUST00000121969 156 ntBASIC1.11□□□□□ -2.23
Trafd1Q3UDK1 Gm25654-201ENSMUST00000158467 88 ntBASIC1.11□□□□□ -2.23
Trafd1Q3UDK1 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.11□□□□□ -2.23
Trafd1Q3UDK1 Gm25069-201ENSMUST00000175238 86 ntBASIC1.11□□□□□ -2.23
Trafd1Q3UDK1 Gm25750-201ENSMUST00000175483 112 ntBASIC1.11□□□□□ -2.23
Trafd1Q3UDK1 Gm23141-201ENSMUST00000178682 94 ntBASIC1.11□□□□□ -2.23
Trafd1Q3UDK1 Gm27419-201ENSMUST00000184576 109 ntBASIC1.11□□□□□ -2.23
Trafd1Q3UDK1 Gm28344-201ENSMUST00000185704 279 ntBASIC1.11□□□□□ -2.23
Trafd1Q3UDK1 Gm25038-201ENSMUST00000082928 130 ntBASIC1.11□□□□□ -2.23
Trafd1Q3UDK1 Gm22743-201ENSMUST00000083445 133 ntBASIC1.11□□□□□ -2.23
Trafd1Q3UDK1 Gm26293-201ENSMUST00000104170 84 ntBASIC1.1□□□□□ -2.23
Trafd1Q3UDK1 Gm22149-201ENSMUST00000104442 136 ntBASIC1.1□□□□□ -2.23
Trafd1Q3UDK1 Gm23339-201ENSMUST00000158962 139 ntBASIC1.1□□□□□ -2.23
Trafd1Q3UDK1 Mir5104-201ENSMUST00000175319 94 ntBASIC1.1□□□□□ -2.23
Trafd1Q3UDK1 Mir7039-201ENSMUST00000183852 85 ntBASIC1.1□□□□□ -2.23
Trafd1Q3UDK1 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.1□□□□□ -2.23
Trafd1Q3UDK1 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.1□□□□□ -2.23
Trafd1Q3UDK1 Gm23245-201ENSMUST00000083370 135 ntBASIC1.1□□□□□ -2.23
Trafd1Q3UDK1 Mir384-201ENSMUST00000083565 88 ntBASIC1.1□□□□□ -2.23
Trafd1Q3UDK1 Gm24522-201ENSMUST00000083964 108 ntBASIC1.1□□□□□ -2.23
Trafd1Q3UDK1 Gm25170-201ENSMUST00000104191 129 ntBASIC1.09□□□□□ -2.23
Trafd1Q3UDK1 Gm23584-201ENSMUST00000157655 129 ntBASIC1.09□□□□□ -2.23
Trafd1Q3UDK1 Gm24942-201ENSMUST00000158328 114 ntBASIC1.09□□□□□ -2.23
Trafd1Q3UDK1 Mir1931-201ENSMUST00000158589 119 ntBASIC1.09□□□□□ -2.23
Trafd1Q3UDK1 Traj60-201ENSMUST00000167781 54 ntBASIC1.09□□□□□ -2.23
Trafd1Q3UDK1 Gm23060-201ENSMUST00000102345 109 ntBASIC1.08□□□□□ -2.24
Trafd1Q3UDK1 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Trafd1Q3UDK1 Gm11856-201ENSMUST00000118712 276 ntBASIC1.08□□□□□ -2.24
Trafd1Q3UDK1 Gm25768-201ENSMUST00000158570 98 ntBASIC1.08□□□□□ -2.24
Trafd1Q3UDK1 Gm25715-201ENSMUST00000158627 125 ntBASIC1.08□□□□□ -2.24
Trafd1Q3UDK1 Gm20391-201ENSMUST00000174722 106 ntBASIC1.08□□□□□ -2.24
Trafd1Q3UDK1 Mir3061-201ENSMUST00000175129 91 ntBASIC1.08□□□□□ -2.24
Trafd1Q3UDK1 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Trafd1Q3UDK1 Gm6003-201ENSMUST00000187903 463 ntBASIC1.08□□□□□ -2.24
Trafd1Q3UDK1 Gm44921-201ENSMUST00000205290 301 ntBASIC1.08□□□□□ -2.24
Trafd1Q3UDK1 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.08□□□□□ -2.24
Trafd1Q3UDK1 Gm25855-201ENSMUST00000082787 72 ntBASIC1.08□□□□□ -2.24
Trafd1Q3UDK1 Gm22884-201ENSMUST00000083127 140 ntBASIC1.08□□□□□ -2.24
Trafd1Q3UDK1 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.07□□□□□ -2.24
Trafd1Q3UDK1 Gm12449-201ENSMUST00000117572 234 ntBASIC1.07□□□□□ -2.24
Trafd1Q3UDK1 Gm14923-201ENSMUST00000118270 155 ntBASIC1.07□□□□□ -2.24
Trafd1Q3UDK1 Gm25783-201ENSMUST00000122525 190 ntBASIC1.07□□□□□ -2.24
Trafd1Q3UDK1 Gm24915-201ENSMUST00000157288 78 ntBASIC1.07□□□□□ -2.24
Trafd1Q3UDK1 Gm23542-201ENSMUST00000158208 96 ntBASIC1.07□□□□□ -2.24
Trafd1Q3UDK1 Gm22403-201ENSMUST00000174919 84 ntBASIC1.07□□□□□ -2.24
Trafd1Q3UDK1 Mir1954-201ENSMUST00000175595 86 ntBASIC1.07□□□□□ -2.24
Trafd1Q3UDK1 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.07□□□□□ -2.24
Trafd1Q3UDK1 Mir6381-201ENSMUST00000183426 87 ntBASIC1.07□□□□□ -2.24
Trafd1Q3UDK1 Mir7663-201ENSMUST00000183950 61 ntBASIC1.07□□□□□ -2.24
Trafd1Q3UDK1 Gm27656-201ENSMUST00000185055 80 ntBASIC1.07□□□□□ -2.24
Trafd1Q3UDK1 Gm36189-201ENSMUST00000204113 523 ntBASIC1.07□□□□□ -2.24
Trafd1Q3UDK1 Gm45268-201ENSMUST00000210046 370 ntBASIC1.07□□□□□ -2.24
Trafd1Q3UDK1 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.07□□□□□ -2.24
Trafd1Q3UDK1 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.06□□□□□ -2.24
Trafd1Q3UDK1 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.06□□□□□ -2.24
Trafd1Q3UDK1 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.06□□□□□ -2.24
Trafd1Q3UDK1 Gm22477-201ENSMUST00000122569 316 ntBASIC1.06□□□□□ -2.24
Trafd1Q3UDK1 Gm23655-201ENSMUST00000122627 105 ntBASIC1.06□□□□□ -2.24
Trafd1Q3UDK1 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC1.06□□□□□ -2.24
Trafd1Q3UDK1 Gm23996-201ENSMUST00000158062 131 ntBASIC1.06□□□□□ -2.24
Trafd1Q3UDK1 Gm25558-201ENSMUST00000158083 106 ntBASIC1.06□□□□□ -2.24
Trafd1Q3UDK1 Gm22888-201ENSMUST00000158640 77 ntBASIC1.06□□□□□ -2.24
Trafd1Q3UDK1 Gm23340-201ENSMUST00000158955 123 ntBASIC1.06□□□□□ -2.24
Trafd1Q3UDK1 Gm27668-201ENSMUST00000184188 120 ntBASIC1.06□□□□□ -2.24
Trafd1Q3UDK1 Gm37586-201ENSMUST00000193654 204 ntBASIC1.06□□□□□ -2.24
Trafd1Q3UDK1 Gm44057-201ENSMUST00000204547 96 ntBASIC1.06□□□□□ -2.24
Trafd1Q3UDK1 Gm18188-201ENSMUST00000219386 478 ntBASIC1.06□□□□□ -2.24
Trafd1Q3UDK1 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.06□□□□□ -2.24
Trafd1Q3UDK1 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.06□□□□□ -2.24
Trafd1Q3UDK1 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.05□□□□□ -2.24
Trafd1Q3UDK1 Snord89-201ENSMUST00000104516 110 ntBASIC1.05□□□□□ -2.24
Trafd1Q3UDK1 Gm14838-201ENSMUST00000118913 248 ntBASIC1.05□□□□□ -2.24
Trafd1Q3UDK1 Gm26279-201ENSMUST00000157095 102 ntBASIC1.05□□□□□ -2.24
Trafd1Q3UDK1 Gm23258-201ENSMUST00000158319 106 ntBASIC1.05□□□□□ -2.24
Trafd1Q3UDK1 Gm22164-201ENSMUST00000158413 106 ntBASIC1.05□□□□□ -2.24
Trafd1Q3UDK1 Gm26213-201ENSMUST00000158582 110 ntBASIC1.05□□□□□ -2.24
Trafd1Q3UDK1 Gm25935-201ENSMUST00000178746 107 ntBASIC1.05□□□□□ -2.24
Trafd1Q3UDK1 Gm28669-201ENSMUST00000188400 100 ntBASIC1.05□□□□□ -2.24
Trafd1Q3UDK1 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.05□□□□□ -2.24
Trafd1Q3UDK1 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.05□□□□□ -2.24
Trafd1Q3UDK1 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.05□□□□□ -2.24
Trafd1Q3UDK1 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.05□□□□□ -2.24
Trafd1Q3UDK1 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.05□□□□□ -2.24
Trafd1Q3UDK1 Gm23299-201ENSMUST00000082708 79 ntBASIC1.05□□□□□ -2.24
Trafd1Q3UDK1 Snord1a-201ENSMUST00000083160 74 ntBASIC1.05□□□□□ -2.24
Trafd1Q3UDK1 Gm22744-201ENSMUST00000083444 65 ntBASIC1.05□□□□□ -2.24
Trafd1Q3UDK1 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.05□□□□□ -2.24
Trafd1Q3UDK1 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Trafd1Q3UDK1 Mir466p-201ENSMUST00000103925 89 ntBASIC1.04□□□□□ -2.24
Trafd1Q3UDK1 Gm24867-201ENSMUST00000104161 107 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 149.2 ms