Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm28669-201ENSMUST00000188400 100 ntBASIC0.32□□□□□ -2.36
Trim43aQ3TL54 Gm37763-201ENSMUST00000193445 120 ntBASIC0.32□□□□□ -2.36
Trim43aQ3TL54 AC164297.5-201ENSMUST00000224365 198 ntBASIC0.32□□□□□ -2.36
Trim43aQ3TL54 Gm23412-201ENSMUST00000083017 107 ntBASIC0.32□□□□□ -2.36
Trim43aQ3TL54 Gm25138-201ENSMUST00000083248 136 ntBASIC0.32□□□□□ -2.36
Trim43aQ3TL54 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.32□□□□□ -2.36
Trim43aQ3TL54 Mir224-201ENSMUST00000083608 82 ntBASIC0.32□□□□□ -2.36
Trim43aQ3TL54 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC0.32□□□□□ -2.36
Trim43aQ3TL54 Gm23024-201ENSMUST00000158770 292 ntBASIC0.31□□□□□ -2.36
Trim43aQ3TL54 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.31□□□□□ -2.36
Trim43aQ3TL54 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.31□□□□□ -2.36
Trim43aQ3TL54 AC159619.2-201ENSMUST00000222924 401 ntBASIC0.31□□□□□ -2.36
Trim43aQ3TL54 Gm30155-201ENSMUST00000223458 339 ntBASIC0.31□□□□□ -2.36
Trim43aQ3TL54 n-R5s94-201ENSMUST00000082573 119 ntBASIC0.31□□□□□ -2.36
Trim43aQ3TL54 Snord42a-201ENSMUST00000082606 65 ntBASIC0.31□□□□□ -2.36
Trim43aQ3TL54 Gm24043-201ENSMUST00000083108 116 ntBASIC0.31□□□□□ -2.36
Trim43aQ3TL54 Gm23969-201ENSMUST00000083324 74 ntBASIC0.31□□□□□ -2.36
Trim43aQ3TL54 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.31□□□□□ -2.36
Trim43aQ3TL54 Gm26274-201ENSMUST00000157103 321 ntBASIC0.3□□□□□ -2.36
Trim43aQ3TL54 Gm25393-201ENSMUST00000157336 285 ntBASIC0.3□□□□□ -2.36
Trim43aQ3TL54 Gm22814-201ENSMUST00000157452 104 ntBASIC0.3□□□□□ -2.36
Trim43aQ3TL54 Gm44419-201ENSMUST00000203338 229 ntBASIC0.3□□□□□ -2.36
Trim43aQ3TL54 AC154296.2-201ENSMUST00000214696 545 ntBASIC0.3□□□□□ -2.36
Trim43aQ3TL54 Gm23404-201ENSMUST00000082543 97 ntBASIC0.3□□□□□ -2.36
Trim43aQ3TL54 Mir451a-201ENSMUST00000093557 72 ntBASIC0.3□□□□□ -2.36
Trim43aQ3TL54 Mir710-201ENSMUST00000102088 110 ntBASIC0.29□□□□□ -2.36
Trim43aQ3TL54 Gm23531-201ENSMUST00000104567 68 ntBASIC0.29□□□□□ -2.36
Trim43aQ3TL54 Gm45471-201ENSMUST00000211270 281 ntBASIC0.29□□□□□ -2.36
Trim43aQ3TL54 AC153526.1-201ENSMUST00000219750 190 ntBASIC0.29□□□□□ -2.36
Trim43aQ3TL54 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.29□□□□□ -2.36
Trim43aQ3TL54 Gm22421-201ENSMUST00000083058 107 ntBASIC0.29□□□□□ -2.36
Trim43aQ3TL54 Gm6985-201ENSMUST00000121255 271 ntBASIC0.28□□□□□ -2.36
Trim43aQ3TL54 Gm23982-201ENSMUST00000157141 106 ntBASIC0.28□□□□□ -2.36
Trim43aQ3TL54 Gm22088-201ENSMUST00000158341 117 ntBASIC0.28□□□□□ -2.36
Trim43aQ3TL54 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.28□□□□□ -2.36
Trim43aQ3TL54 Gm27607-201ENSMUST00000185162 122 ntBASIC0.28□□□□□ -2.36
Trim43aQ3TL54 Gm43563-201ENSMUST00000196761 198 ntBASIC0.28□□□□□ -2.36
Trim43aQ3TL54 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.28□□□□□ -2.36
Trim43aQ3TL54 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.28□□□□□ -2.36
Trim43aQ3TL54 Gm26326-201ENSMUST00000083070 129 ntBASIC0.28□□□□□ -2.36
Trim43aQ3TL54 Gm25878-201ENSMUST00000104327 93 ntBASIC0.27□□□□□ -2.37
Trim43aQ3TL54 Gm24476-201ENSMUST00000157437 131 ntBASIC0.27□□□□□ -2.37
Trim43aQ3TL54 Gm24015-201ENSMUST00000157725 232 ntBASIC0.27□□□□□ -2.37
Trim43aQ3TL54 Gm23640-201ENSMUST00000157860 104 ntBASIC0.27□□□□□ -2.37
Trim43aQ3TL54 Gm23853-201ENSMUST00000158375 104 ntBASIC0.27□□□□□ -2.37
Trim43aQ3TL54 Gm44057-201ENSMUST00000204547 96 ntBASIC0.27□□□□□ -2.37
Trim43aQ3TL54 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
Trim43aQ3TL54 Gm22021-201ENSMUST00000104353 107 ntBASIC0.26□□□□□ -2.37
Trim43aQ3TL54 Gm26415-201ENSMUST00000157673 292 ntBASIC0.26□□□□□ -2.37
Trim43aQ3TL54 Gm22706-201ENSMUST00000157907 112 ntBASIC0.26□□□□□ -2.37
Trim43aQ3TL54 Gm25718-201ENSMUST00000158632 118 ntBASIC0.26□□□□□ -2.37
Trim43aQ3TL54 Mir1933-201ENSMUST00000158930 88 ntBASIC0.26□□□□□ -2.37
Trim43aQ3TL54 Gm22801-201ENSMUST00000175624 84 ntBASIC0.26□□□□□ -2.37
Trim43aQ3TL54 Gm44211-201ENSMUST00000204867 145 ntBASIC0.26□□□□□ -2.37
Trim43aQ3TL54 Gm45544-201ENSMUST00000211130 88 ntBASIC0.26□□□□□ -2.37
Trim43aQ3TL54 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.26□□□□□ -2.37
Trim43aQ3TL54 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Trim43aQ3TL54 Gm12837-201ENSMUST00000120131 373 ntBASIC0.25□□□□□ -2.37
Trim43aQ3TL54 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.25□□□□□ -2.37
Trim43aQ3TL54 Gm23180-201ENSMUST00000158686 125 ntBASIC0.25□□□□□ -2.37
Trim43aQ3TL54 Mir6350-201ENSMUST00000183639 105 ntBASIC0.25□□□□□ -2.37
Trim43aQ3TL54 Gm28849-201ENSMUST00000188127 174 ntBASIC0.25□□□□□ -2.37
Trim43aQ3TL54 Mir6896-201ENSMUST00000198033 73 ntBASIC0.25□□□□□ -2.37
Trim43aQ3TL54 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC0.25□□□□□ -2.37
Trim43aQ3TL54 Snora20-201ENSMUST00000082703 128 ntBASIC0.25□□□□□ -2.37
Trim43aQ3TL54 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.25□□□□□ -2.37
Trim43aQ3TL54 Mir669f-201ENSMUST00000103850 121 ntBASIC0.24□□□□□ -2.37
Trim43aQ3TL54 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
Trim43aQ3TL54 Gm25318-201ENSMUST00000122554 314 ntBASIC0.24□□□□□ -2.37
Trim43aQ3TL54 Gm26090-201ENSMUST00000157897 128 ntBASIC0.24□□□□□ -2.37
Trim43aQ3TL54 Gm22983-201ENSMUST00000158308 104 ntBASIC0.24□□□□□ -2.37
Trim43aQ3TL54 Gm27997-201ENSMUST00000184942 69 ntBASIC0.24□□□□□ -2.37
Trim43aQ3TL54 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.24□□□□□ -2.37
Trim43aQ3TL54 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.24□□□□□ -2.37
Trim43aQ3TL54 Gm23994-201ENSMUST00000158059 88 ntBASIC0.23□□□□□ -2.37
Trim43aQ3TL54 Gm24211-201ENSMUST00000158264 107 ntBASIC0.23□□□□□ -2.37
Trim43aQ3TL54 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.23□□□□□ -2.37
Trim43aQ3TL54 Gm23416-201ENSMUST00000175520 95 ntBASIC0.23□□□□□ -2.37
Trim43aQ3TL54 Gm23571-201ENSMUST00000180073 127 ntBASIC0.23□□□□□ -2.37
Trim43aQ3TL54 Gm27717-201ENSMUST00000183933 151 ntBASIC0.23□□□□□ -2.37
Trim43aQ3TL54 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC0.23□□□□□ -2.37
Trim43aQ3TL54 Gm44959-201ENSMUST00000209127 231 ntBASIC0.23□□□□□ -2.37
Trim43aQ3TL54 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.23□□□□□ -2.37
Trim43aQ3TL54 Gm24527-201ENSMUST00000082920 107 ntBASIC0.23□□□□□ -2.37
Trim43aQ3TL54 Gm24204-201ENSMUST00000082950 107 ntBASIC0.23□□□□□ -2.37
Trim43aQ3TL54 Snora19-201ENSMUST00000082962 132 ntBASIC0.23□□□□□ -2.37
Trim43aQ3TL54 Gm23658-201ENSMUST00000083233 132 ntBASIC0.23□□□□□ -2.37
Trim43aQ3TL54 Gm23845-201ENSMUST00000083834 152 ntBASIC0.23□□□□□ -2.37
Trim43aQ3TL54 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.22□□□□□ -2.37
Trim43aQ3TL54 Gm14671-201ENSMUST00000121790 262 ntBASIC0.22□□□□□ -2.37
Trim43aQ3TL54 Gm24594-201ENSMUST00000122502 99 ntBASIC0.22□□□□□ -2.37
Trim43aQ3TL54 Gm22321-201ENSMUST00000157152 104 ntBASIC0.22□□□□□ -2.37
Trim43aQ3TL54 Gm22097-201ENSMUST00000157929 278 ntBASIC0.22□□□□□ -2.37
Trim43aQ3TL54 Gm25615-201ENSMUST00000177836 94 ntBASIC0.22□□□□□ -2.37
Trim43aQ3TL54 Gm44055-201ENSMUST00000204376 247 ntBASIC0.22□□□□□ -2.37
Trim43aQ3TL54 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.22□□□□□ -2.37
Trim43aQ3TL54 Gm22364-201ENSMUST00000083097 98 ntBASIC0.22□□□□□ -2.37
Trim43aQ3TL54 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
Trim43aQ3TL54 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.21□□□□□ -2.38
Trim43aQ3TL54 Gm24500-201ENSMUST00000158447 124 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 192.8 ms