Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm24598-201ENSMUST00000122510 74 ntBASIC2.22□□□□□ -2.05
Usp39Q3TIX9 Gm24911-201ENSMUST00000157292 136 ntBASIC2.22□□□□□ -2.05
Usp39Q3TIX9 Gm24559-201ENSMUST00000157519 121 ntBASIC2.22□□□□□ -2.05
Usp39Q3TIX9 Gm23113-201ENSMUST00000158477 99 ntBASIC2.22□□□□□ -2.05
Usp39Q3TIX9 Gm25488-201ENSMUST00000158728 118 ntBASIC2.22□□□□□ -2.05
Usp39Q3TIX9 Gm22264-201ENSMUST00000178200 107 ntBASIC2.22□□□□□ -2.05
Usp39Q3TIX9 Gm26864-201ENSMUST00000181346 156 ntBASIC2.22□□□□□ -2.05
Usp39Q3TIX9 Mir7232-201ENSMUST00000197929 74 ntBASIC2.22□□□□□ -2.05
Usp39Q3TIX9 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.22□□□□□ -2.05
Usp39Q3TIX9 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
Usp39Q3TIX9 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Usp39Q3TIX9 Gm23011-201ENSMUST00000104148 132 ntBASIC2.21□□□□□ -2.06
Usp39Q3TIX9 Gm15289-201ENSMUST00000117793 244 ntBASIC2.21□□□□□ -2.06
Usp39Q3TIX9 Snord11-201ENSMUST00000158468 84 ntBASIC2.21□□□□□ -2.06
Usp39Q3TIX9 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.21□□□□□ -2.06
Usp39Q3TIX9 Gm44491-201ENSMUST00000196794 96 ntBASIC2.21□□□□□ -2.06
Usp39Q3TIX9 Mir6925-201ENSMUST00000197857 70 ntBASIC2.21□□□□□ -2.06
Usp39Q3TIX9 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.21□□□□□ -2.06
Usp39Q3TIX9 Gm16976-205ENSMUST00000227324 226 ntBASIC2.21□□□□□ -2.06
Usp39Q3TIX9 Gm25796-201ENSMUST00000082645 163 ntBASIC2.21□□□□□ -2.06
Usp39Q3TIX9 Gm24661-201ENSMUST00000083205 104 ntBASIC2.21□□□□□ -2.06
Usp39Q3TIX9 Mir9-2-201ENSMUST00000083490 72 ntBASIC2.21□□□□□ -2.06
Usp39Q3TIX9 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
Usp39Q3TIX9 BC022960-201ENSMUST00000119987 1815 ntBASIC2.21□□□□□ -2.06
Usp39Q3TIX9 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.21□□□□□ -2.06
Usp39Q3TIX9 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.21□□□□□ -2.06
Usp39Q3TIX9 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.21□□□□□ -2.06
Usp39Q3TIX9 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Usp39Q3TIX9 Gm22031-201ENSMUST00000116945 126 ntBASIC2.2□□□□□ -2.06
Usp39Q3TIX9 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.2□□□□□ -2.06
Usp39Q3TIX9 Gm24632-201ENSMUST00000122770 323 ntBASIC2.2□□□□□ -2.06
Usp39Q3TIX9 Gm24769-201ENSMUST00000158506 129 ntBASIC2.2□□□□□ -2.06
Usp39Q3TIX9 Gm16561-201ENSMUST00000163001 192 ntBASIC2.2□□□□□ -2.06
Usp39Q3TIX9 Mir7009-201ENSMUST00000184519 64 ntBASIC2.2□□□□□ -2.06
Usp39Q3TIX9 Gm44477-201ENSMUST00000199661 110 ntBASIC2.2□□□□□ -2.06
Usp39Q3TIX9 AC129085.1-201ENSMUST00000225263 165 ntBASIC2.2□□□□□ -2.06
Usp39Q3TIX9 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
Usp39Q3TIX9 Gm22079-201ENSMUST00000157592 106 ntBASIC2.19□□□□□ -2.06
Usp39Q3TIX9 Gm23817-201ENSMUST00000158449 104 ntBASIC2.19□□□□□ -2.06
Usp39Q3TIX9 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC2.19□□□□□ -2.06
Usp39Q3TIX9 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.19□□□□□ -2.06
Usp39Q3TIX9 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.19□□□□□ -2.06
Usp39Q3TIX9 Gm22950-201ENSMUST00000082776 107 ntBASIC2.19□□□□□ -2.06
Usp39Q3TIX9 Gm23244-201ENSMUST00000083375 92 ntBASIC2.19□□□□□ -2.06
Usp39Q3TIX9 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Usp39Q3TIX9 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.18□□□□□ -2.06
Usp39Q3TIX9 Gm25091-201ENSMUST00000103997 71 ntBASIC2.18□□□□□ -2.06
Usp39Q3TIX9 Gm23951-201ENSMUST00000104029 132 ntBASIC2.18□□□□□ -2.06
Usp39Q3TIX9 Gm15069-201ENSMUST00000117792 192 ntBASIC2.18□□□□□ -2.06
Usp39Q3TIX9 Gm15068-201ENSMUST00000119796 192 ntBASIC2.18□□□□□ -2.06
Usp39Q3TIX9 Gm12013-201ENSMUST00000121971 155 ntBASIC2.18□□□□□ -2.06
Usp39Q3TIX9 Gm16355-201ENSMUST00000128606 231 ntBASIC2.18□□□□□ -2.06
Usp39Q3TIX9 Gm22554-201ENSMUST00000157798 147 ntBASIC2.18□□□□□ -2.06
Usp39Q3TIX9 Gm22510-201ENSMUST00000179304 79 ntBASIC2.18□□□□□ -2.06
Usp39Q3TIX9 Gm26336-201ENSMUST00000179449 79 ntBASIC2.18□□□□□ -2.06
Usp39Q3TIX9 Gm26390-201ENSMUST00000179628 79 ntBASIC2.18□□□□□ -2.06
Usp39Q3TIX9 Mir6905-201ENSMUST00000184228 70 ntBASIC2.18□□□□□ -2.06
Usp39Q3TIX9 Gm37557-201ENSMUST00000191640 139 ntBASIC2.18□□□□□ -2.06
Usp39Q3TIX9 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Usp39Q3TIX9 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.17□□□□□ -2.06
Usp39Q3TIX9 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Usp39Q3TIX9 Gm22083-201ENSMUST00000157586 102 ntBASIC2.17□□□□□ -2.06
Usp39Q3TIX9 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Usp39Q3TIX9 Gm25022-201ENSMUST00000102205 83 ntBASIC2.16□□□□□ -2.06
Usp39Q3TIX9 Gm14709-201ENSMUST00000121225 304 ntBASIC2.16□□□□□ -2.06
Usp39Q3TIX9 Gm25544-201ENSMUST00000122676 120 ntBASIC2.16□□□□□ -2.06
Usp39Q3TIX9 Gm15281-201ENSMUST00000125181 351 ntBASIC2.16□□□□□ -2.06
Usp39Q3TIX9 Gm26105-201ENSMUST00000157253 190 ntBASIC2.16□□□□□ -2.06
Usp39Q3TIX9 Gm26150-201ENSMUST00000157426 151 ntBASIC2.16□□□□□ -2.06
Usp39Q3TIX9 Mir467a-6-201ENSMUST00000177790 83 ntBASIC2.16□□□□□ -2.06
Usp39Q3TIX9 Mir467a-3-201ENSMUST00000178082 83 ntBASIC2.16□□□□□ -2.06
Usp39Q3TIX9 Mir467a-7-201ENSMUST00000178635 83 ntBASIC2.16□□□□□ -2.06
Usp39Q3TIX9 Gm8034-201ENSMUST00000178853 132 ntBASIC2.16□□□□□ -2.06
Usp39Q3TIX9 Mir467a-10-201ENSMUST00000179320 83 ntBASIC2.16□□□□□ -2.06
Usp39Q3TIX9 Mir467a-5-201ENSMUST00000179352 83 ntBASIC2.16□□□□□ -2.06
Usp39Q3TIX9 Mir467a-2-201ENSMUST00000179447 83 ntBASIC2.16□□□□□ -2.06
Usp39Q3TIX9 Mir467a-9-201ENSMUST00000179752 83 ntBASIC2.16□□□□□ -2.06
Usp39Q3TIX9 Mir467a-4-201ENSMUST00000179923 83 ntBASIC2.16□□□□□ -2.06
Usp39Q3TIX9 Mir467a-8-201ENSMUST00000180070 83 ntBASIC2.16□□□□□ -2.06
Usp39Q3TIX9 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.16□□□□□ -2.06
Usp39Q3TIX9 Gm28669-201ENSMUST00000188400 100 ntBASIC2.16□□□□□ -2.06
Usp39Q3TIX9 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Usp39Q3TIX9 Gm22683-201ENSMUST00000082854 137 ntBASIC2.16□□□□□ -2.06
Usp39Q3TIX9 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Usp39Q3TIX9 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.15□□□□□ -2.06
Usp39Q3TIX9 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Usp39Q3TIX9 Mir547-201ENSMUST00000102051 78 ntBASIC2.15□□□□□ -2.07
Usp39Q3TIX9 Gm14946-201ENSMUST00000119859 296 ntBASIC2.15□□□□□ -2.07
Usp39Q3TIX9 Gm16510-201ENSMUST00000153501 249 ntBASIC2.15□□□□□ -2.07
Usp39Q3TIX9 Gm22163-201ENSMUST00000158408 135 ntBASIC2.15□□□□□ -2.07
Usp39Q3TIX9 Gm25678-201ENSMUST00000174984 73 ntBASIC2.15□□□□□ -2.07
Usp39Q3TIX9 Gm23090-201ENSMUST00000177331 78 ntBASIC2.15□□□□□ -2.07
Usp39Q3TIX9 Gm37330-201ENSMUST00000192606 153 ntBASIC2.15□□□□□ -2.07
Usp39Q3TIX9 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.15□□□□□ -2.07
Usp39Q3TIX9 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.15□□□□□ -2.07
Usp39Q3TIX9 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC2.15□□□□□ -2.07
Usp39Q3TIX9 Gm24044-201ENSMUST00000083107 156 ntBASIC2.15□□□□□ -2.07
Usp39Q3TIX9 Gm22866-201ENSMUST00000083947 177 ntBASIC2.15□□□□□ -2.07
Usp39Q3TIX9 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.15□□□□□ -2.07
Usp39Q3TIX9 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 151 ms