Protein–RNA interactions for Protein: Q08943

Ssrp1, FACT complex subunit SSRP1, mousemouse

Known RBP Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1Q08943 Gm24805-201ENSMUST00000082931 104 ntBASIC2.14□□□□□ -2.07
Ssrp1Q08943 Gm23100-201ENSMUST00000083455 141 ntBASIC2.14□□□□□ -2.07
Ssrp1Q08943 Gm22105-201ENSMUST00000116734 116 ntBASIC2.13□□□□□ -2.07
Ssrp1Q08943 Gm11856-201ENSMUST00000118712 276 ntBASIC2.13□□□□□ -2.07
Ssrp1Q08943 Gm25771-201ENSMUST00000158565 144 ntBASIC2.13□□□□□ -2.07
Ssrp1Q08943 Gm43381-201ENSMUST00000198553 165 ntBASIC2.13□□□□□ -2.07
Ssrp1Q08943 Gm44470-201ENSMUST00000203913 142 ntBASIC2.13□□□□□ -2.07
Ssrp1Q08943 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.13□□□□□ -2.07
Ssrp1Q08943 AC154328.1-201ENSMUST00000225875 307 ntBASIC2.13□□□□□ -2.07
Ssrp1Q08943 Gm25588-201ENSMUST00000082501 140 ntBASIC2.13□□□□□ -2.07
Ssrp1Q08943 Gm25855-201ENSMUST00000082787 72 ntBASIC2.13□□□□□ -2.07
Ssrp1Q08943 Gm23722-201ENSMUST00000083002 130 ntBASIC2.13□□□□□ -2.07
Ssrp1Q08943 Mir30d-201ENSMUST00000083503 82 ntBASIC2.13□□□□□ -2.07
Ssrp1Q08943 Gm26077-201ENSMUST00000104064 123 ntBASIC2.12□□□□□ -2.07
Ssrp1Q08943 Gm25915-201ENSMUST00000104265 126 ntBASIC2.12□□□□□ -2.07
Ssrp1Q08943 Gm22790-201ENSMUST00000157229 129 ntBASIC2.12□□□□□ -2.07
Ssrp1Q08943 Gm25425-201ENSMUST00000157611 96 ntBASIC2.12□□□□□ -2.07
Ssrp1Q08943 Gm25364-201ENSMUST00000158851 107 ntBASIC2.12□□□□□ -2.07
Ssrp1Q08943 Gm25750-201ENSMUST00000175483 112 ntBASIC2.12□□□□□ -2.07
Ssrp1Q08943 Gm27517-201ENSMUST00000184347 236 ntBASIC2.12□□□□□ -2.07
Ssrp1Q08943 Gm8219-201ENSMUST00000218309 242 ntBASIC2.12□□□□□ -2.07
Ssrp1Q08943 Snord61-201ENSMUST00000083176 71 ntBASIC2.12□□□□□ -2.07
Ssrp1Q08943 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Ssrp1Q08943 Mir669b-201ENSMUST00000102172 97 ntBASIC2.11□□□□□ -2.07
Ssrp1Q08943 Mir880-201ENSMUST00000104809 78 ntBASIC2.11□□□□□ -2.07
Ssrp1Q08943 Gm3788-201ENSMUST00000119949 136 ntBASIC2.11□□□□□ -2.07
Ssrp1Q08943 Gm14709-201ENSMUST00000121225 304 ntBASIC2.11□□□□□ -2.07
Ssrp1Q08943 Gm22227-201ENSMUST00000157356 259 ntBASIC2.11□□□□□ -2.07
Ssrp1Q08943 Gm26073-201ENSMUST00000179906 127 ntBASIC2.11□□□□□ -2.07
Ssrp1Q08943 Gm29613-201ENSMUST00000185846 313 ntBASIC2.11□□□□□ -2.07
Ssrp1Q08943 Gm29544-201ENSMUST00000188860 313 ntBASIC2.11□□□□□ -2.07
Ssrp1Q08943 Gm28808-201ENSMUST00000190978 313 ntBASIC2.11□□□□□ -2.07
Ssrp1Q08943 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.11□□□□□ -2.07
Ssrp1Q08943 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.11□□□□□ -2.07
Ssrp1Q08943 Gm23239-201ENSMUST00000083006 181 ntBASIC2.11□□□□□ -2.07
Ssrp1Q08943 Gm10172-201ENSMUST00000085929 558 ntBASIC2.11□□□□□ -2.07
Ssrp1Q08943 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Ssrp1Q08943 Snord90-201ENSMUST00000104568 111 ntBASIC2.1□□□□□ -2.07
Ssrp1Q08943 Gm23996-201ENSMUST00000158062 131 ntBASIC2.1□□□□□ -2.07
Ssrp1Q08943 Gm26291-201ENSMUST00000158889 137 ntBASIC2.1□□□□□ -2.07
Ssrp1Q08943 Mir6901-201ENSMUST00000185062 62 ntBASIC2.1□□□□□ -2.07
Ssrp1Q08943 Gm18665-201ENSMUST00000189783 270 ntBASIC2.1□□□□□ -2.07
Ssrp1Q08943 Gm44358-201ENSMUST00000196301 98 ntBASIC2.1□□□□□ -2.07
Ssrp1Q08943 Gm22884-201ENSMUST00000083127 140 ntBASIC2.1□□□□□ -2.07
Ssrp1Q08943 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.09□□□□□ -2.07
Ssrp1Q08943 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Ssrp1Q08943 Gm24478-201ENSMUST00000157439 158 ntBASIC2.09□□□□□ -2.07
Ssrp1Q08943 Gm21885-201ENSMUST00000178891 327 ntBASIC2.09□□□□□ -2.07
Ssrp1Q08943 Gm42855-201ENSMUST00000197388 253 ntBASIC2.09□□□□□ -2.07
Ssrp1Q08943 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Ssrp1Q08943 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.09□□□□□ -2.07
Ssrp1Q08943 AC126939.3-201ENSMUST00000226061 166 ntBASIC2.09□□□□□ -2.07
Ssrp1Q08943 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
Ssrp1Q08943 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Ssrp1Q08943 Gm11334-201ENSMUST00000121969 156 ntBASIC2.08□□□□□ -2.08
Ssrp1Q08943 Gm22666-201ENSMUST00000158717 164 ntBASIC2.08□□□□□ -2.08
Ssrp1Q08943 Gm26337-201ENSMUST00000178000 79 ntBASIC2.08□□□□□ -2.08
Ssrp1Q08943 Mir489-201ENSMUST00000093599 107 ntBASIC2.08□□□□□ -2.08
Ssrp1Q08943 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
Ssrp1Q08943 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Ssrp1Q08943 Gm25090-201ENSMUST00000104000 132 ntBASIC2.07□□□□□ -2.08
Ssrp1Q08943 Gm22494-201ENSMUST00000104495 128 ntBASIC2.07□□□□□ -2.08
Ssrp1Q08943 Gm13433-201ENSMUST00000121701 240 ntBASIC2.07□□□□□ -2.08
Ssrp1Q08943 Gm24770-201ENSMUST00000158505 92 ntBASIC2.07□□□□□ -2.08
Ssrp1Q08943 Gm26213-201ENSMUST00000158582 110 ntBASIC2.07□□□□□ -2.08
Ssrp1Q08943 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.07□□□□□ -2.08
Ssrp1Q08943 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.06□□□□□ -2.08
Ssrp1Q08943 Gm23813-201ENSMUST00000175153 77 ntBASIC2.06□□□□□ -2.08
Ssrp1Q08943 Gm25035-201ENSMUST00000175414 77 ntBASIC2.06□□□□□ -2.08
Ssrp1Q08943 Gm27544-201ENSMUST00000185069 155 ntBASIC2.06□□□□□ -2.08
Ssrp1Q08943 Gm22683-201ENSMUST00000082854 137 ntBASIC2.06□□□□□ -2.08
Ssrp1Q08943 Gm26326-201ENSMUST00000083070 129 ntBASIC2.06□□□□□ -2.08
Ssrp1Q08943 Mir466b-3-201ENSMUST00000103806 81 ntBASIC2.05□□□□□ -2.08
Ssrp1Q08943 Mir669d-201ENSMUST00000104644 121 ntBASIC2.05□□□□□ -2.08
Ssrp1Q08943 Gm14674-201ENSMUST00000117816 342 ntBASIC2.05□□□□□ -2.08
Ssrp1Q08943 CT033781.2-201ENSMUST00000221113 153 ntBASIC2.05□□□□□ -2.08
Ssrp1Q08943 Mir223-201ENSMUST00000102112 110 ntBASIC2.04□□□□□ -2.08
Ssrp1Q08943 Gm25485-201ENSMUST00000104120 132 ntBASIC2.04□□□□□ -2.08
Ssrp1Q08943 Gm13588-201ENSMUST00000120026 135 ntBASIC2.04□□□□□ -2.08
Ssrp1Q08943 Gm22264-201ENSMUST00000178200 107 ntBASIC2.04□□□□□ -2.08
Ssrp1Q08943 Gm23922-201ENSMUST00000178792 79 ntBASIC2.04□□□□□ -2.08
Ssrp1Q08943 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC2.04□□□□□ -2.08
Ssrp1Q08943 Gm24657-201ENSMUST00000180085 79 ntBASIC2.04□□□□□ -2.08
Ssrp1Q08943 Gm22996-201ENSMUST00000180236 79 ntBASIC2.04□□□□□ -2.08
Ssrp1Q08943 AC164561.1-201ENSMUST00000220414 115 ntBASIC2.04□□□□□ -2.08
Ssrp1Q08943 Mir322-201ENSMUST00000083484 95 ntBASIC2.04□□□□□ -2.08
Ssrp1Q08943 Mir9-2-201ENSMUST00000083490 72 ntBASIC2.04□□□□□ -2.08
Ssrp1Q08943 Gm24523-201ENSMUST00000083965 132 ntBASIC2.04□□□□□ -2.08
Ssrp1Q08943 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Ssrp1Q08943 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Ssrp1Q08943 Gm22349-201ENSMUST00000157864 107 ntBASIC2.03□□□□□ -2.08
Ssrp1Q08943 Gm25769-201ENSMUST00000158569 127 ntBASIC2.03□□□□□ -2.08
Ssrp1Q08943 Snora20-201ENSMUST00000082703 128 ntBASIC2.03□□□□□ -2.08
Ssrp1Q08943 Gm24461-201ENSMUST00000082735 103 ntBASIC2.03□□□□□ -2.08
Ssrp1Q08943 Gm22576-201ENSMUST00000083733 104 ntBASIC2.03□□□□□ -2.08
Ssrp1Q08943 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Ssrp1Q08943 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Ssrp1Q08943 Gm14502-201ENSMUST00000118154 113 ntBASIC2.02□□□□□ -2.09
Ssrp1Q08943 Gm24141-201ENSMUST00000122776 115 ntBASIC2.02□□□□□ -2.09
Ssrp1Q08943 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 157 ms