Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm22279-201ENSMUST00000157200 93 ntBASIC2.48□□□□□ -2.01
Ebf1Q07802 Gm22535-201ENSMUST00000158174 119 ntBASIC2.48□□□□□ -2.01
Ebf1Q07802 Gm6788-201ENSMUST00000166459 270 ntBASIC2.48□□□□□ -2.01
Ebf1Q07802 Gm27399-201ENSMUST00000184250 78 ntBASIC2.48□□□□□ -2.01
Ebf1Q07802 Mir7009-201ENSMUST00000184519 64 ntBASIC2.48□□□□□ -2.01
Ebf1Q07802 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Ebf1Q07802 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.48□□□□□ -2.01
Ebf1Q07802 Gm45791-201ENSMUST00000212908 352 ntBASIC2.48□□□□□ -2.01
Ebf1Q07802 AC160962.3-201ENSMUST00000225914 112 ntBASIC2.48□□□□□ -2.01
Ebf1Q07802 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ebf1Q07802 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.48□□□□□ -2.01
Ebf1Q07802 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Ebf1Q07802 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.47□□□□□ -2.01
Ebf1Q07802 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Ebf1Q07802 Gm25878-201ENSMUST00000104327 93 ntBASIC2.47□□□□□ -2.01
Ebf1Q07802 Gm22451-201ENSMUST00000122803 151 ntBASIC2.47□□□□□ -2.01
Ebf1Q07802 Gm25371-201ENSMUST00000158162 101 ntBASIC2.47□□□□□ -2.01
Ebf1Q07802 Gm22387-201ENSMUST00000158191 131 ntBASIC2.47□□□□□ -2.01
Ebf1Q07802 Gm22429-201ENSMUST00000158553 130 ntBASIC2.47□□□□□ -2.01
Ebf1Q07802 Mir6905-201ENSMUST00000184228 70 ntBASIC2.47□□□□□ -2.01
Ebf1Q07802 Gm44477-201ENSMUST00000199661 110 ntBASIC2.47□□□□□ -2.01
Ebf1Q07802 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.47□□□□□ -2.01
Ebf1Q07802 Gm25627-201ENSMUST00000084003 153 ntBASIC2.47□□□□□ -2.01
Ebf1Q07802 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.47□□□□□ -2.01
Ebf1Q07802 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Ebf1Q07802 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Ebf1Q07802 Gm25091-201ENSMUST00000103997 71 ntBASIC2.46□□□□□ -2.02
Ebf1Q07802 Gm23951-201ENSMUST00000104029 132 ntBASIC2.46□□□□□ -2.02
Ebf1Q07802 Gm26420-201ENSMUST00000104273 103 ntBASIC2.46□□□□□ -2.02
Ebf1Q07802 Gm14937-201ENSMUST00000119709 208 ntBASIC2.46□□□□□ -2.02
Ebf1Q07802 Gm25544-201ENSMUST00000122676 120 ntBASIC2.46□□□□□ -2.02
Ebf1Q07802 Gm16355-201ENSMUST00000128606 231 ntBASIC2.46□□□□□ -2.02
Ebf1Q07802 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Ebf1Q07802 Gm26099-201ENSMUST00000157248 109 ntBASIC2.46□□□□□ -2.02
Ebf1Q07802 Gm22079-201ENSMUST00000157592 106 ntBASIC2.46□□□□□ -2.02
Ebf1Q07802 Gm22163-201ENSMUST00000158408 135 ntBASIC2.46□□□□□ -2.02
Ebf1Q07802 Gm7258-201ENSMUST00000179317 300 ntBASIC2.46□□□□□ -2.02
Ebf1Q07802 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.46□□□□□ -2.02
Ebf1Q07802 Gm26168-201ENSMUST00000083787 112 ntBASIC2.46□□□□□ -2.02
Ebf1Q07802 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
Ebf1Q07802 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.45□□□□□ -2.02
Ebf1Q07802 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.45□□□□□ -2.02
Ebf1Q07802 Gm25771-201ENSMUST00000158565 144 ntBASIC2.45□□□□□ -2.02
Ebf1Q07802 Mir7226-201ENSMUST00000184953 60 ntBASIC2.45□□□□□ -2.02
Ebf1Q07802 Mir3961-201ENSMUST00000198795 59 ntBASIC2.45□□□□□ -2.02
Ebf1Q07802 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.45□□□□□ -2.02
Ebf1Q07802 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Ebf1Q07802 Gm23654-201ENSMUST00000116758 126 ntBASIC2.44□□□□□ -2.02
Ebf1Q07802 Gm26473-201ENSMUST00000116763 127 ntBASIC2.44□□□□□ -2.02
Ebf1Q07802 Gm25558-201ENSMUST00000158083 106 ntBASIC2.44□□□□□ -2.02
Ebf1Q07802 Gm24771-201ENSMUST00000158508 137 ntBASIC2.44□□□□□ -2.02
Ebf1Q07802 Gm23190-201ENSMUST00000180307 64 ntBASIC2.44□□□□□ -2.02
Ebf1Q07802 Gm27878-201ENSMUST00000184000 106 ntBASIC2.44□□□□□ -2.02
Ebf1Q07802 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Ebf1Q07802 Gm44932-201ENSMUST00000206799 121 ntBASIC2.44□□□□□ -2.02
Ebf1Q07802 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2.44□□□□□ -2.02
Ebf1Q07802 Gm23244-201ENSMUST00000083375 92 ntBASIC2.44□□□□□ -2.02
Ebf1Q07802 Mir34a-201ENSMUST00000083559 102 ntBASIC2.44□□□□□ -2.02
Ebf1Q07802 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.44□□□□□ -2.02
Ebf1Q07802 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Ebf1Q07802 Mir547-201ENSMUST00000102051 78 ntBASIC2.43□□□□□ -2.02
Ebf1Q07802 Gm13433-201ENSMUST00000121701 240 ntBASIC2.43□□□□□ -2.02
Ebf1Q07802 Gm22517-201ENSMUST00000158265 136 ntBASIC2.43□□□□□ -2.02
Ebf1Q07802 Gm25978-201ENSMUST00000158698 90 ntBASIC2.43□□□□□ -2.02
Ebf1Q07802 Gm23005-201ENSMUST00000158950 136 ntBASIC2.43□□□□□ -2.02
Ebf1Q07802 Gm43722-201ENSMUST00000196054 124 ntBASIC2.43□□□□□ -2.02
Ebf1Q07802 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.43□□□□□ -2.02
Ebf1Q07802 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.43□□□□□ -2.02
Ebf1Q07802 Gm24038-201ENSMUST00000082872 159 ntBASIC2.43□□□□□ -2.02
Ebf1Q07802 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Ebf1Q07802 Mir344e-201ENSMUST00000104677 66 ntBASIC2.42□□□□□ -2.02
Ebf1Q07802 Gm14671-201ENSMUST00000121790 262 ntBASIC2.42□□□□□ -2.02
Ebf1Q07802 Gm23223-201ENSMUST00000158119 127 ntBASIC2.42□□□□□ -2.02
Ebf1Q07802 Gm22251-201ENSMUST00000083216 107 ntBASIC2.42□□□□□ -2.02
Ebf1Q07802 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.41□□□□□ -2.02
Ebf1Q07802 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.41□□□□□ -2.02
Ebf1Q07802 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Ebf1Q07802 Gm22196-201ENSMUST00000116865 109 ntBASIC2.41□□□□□ -2.02
Ebf1Q07802 Gm25945-201ENSMUST00000122484 135 ntBASIC2.41□□□□□ -2.02
Ebf1Q07802 Gm23600-201ENSMUST00000157260 71 ntBASIC2.41□□□□□ -2.02
Ebf1Q07802 Gm23898-201ENSMUST00000158111 103 ntBASIC2.41□□□□□ -2.02
Ebf1Q07802 Gm24212-201ENSMUST00000158258 132 ntBASIC2.41□□□□□ -2.02
Ebf1Q07802 Gm26498-201ENSMUST00000177799 79 ntBASIC2.41□□□□□ -2.02
Ebf1Q07802 Gm22264-201ENSMUST00000178200 107 ntBASIC2.41□□□□□ -2.02
Ebf1Q07802 Gm26230-201ENSMUST00000180141 79 ntBASIC2.41□□□□□ -2.02
Ebf1Q07802 Gm27991-201ENSMUST00000184804 137 ntBASIC2.41□□□□□ -2.02
Ebf1Q07802 Mir7215-201ENSMUST00000200383 51 ntBASIC2.41□□□□□ -2.02
Ebf1Q07802 Mir497-201ENSMUST00000200557 84 ntBASIC2.41□□□□□ -2.02
Ebf1Q07802 Mir301-201ENSMUST00000083655 86 ntBASIC2.41□□□□□ -2.02
Ebf1Q07802 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
Ebf1Q07802 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
Ebf1Q07802 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.4□□□□□ -2.02
Ebf1Q07802 BC022960-201ENSMUST00000119987 1815 ntBASIC2.4□□□□□ -2.02
Ebf1Q07802 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
Ebf1Q07802 Gm25094-201ENSMUST00000103992 131 ntBASIC2.4□□□□□ -2.03
Ebf1Q07802 Gm22796-201ENSMUST00000157234 106 ntBASIC2.4□□□□□ -2.03
Ebf1Q07802 Gm23390-201ENSMUST00000157393 106 ntBASIC2.4□□□□□ -2.03
Ebf1Q07802 Gm22338-201ENSMUST00000157715 129 ntBASIC2.4□□□□□ -2.03
Ebf1Q07802 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.4□□□□□ -2.03
Ebf1Q07802 Gm45544-201ENSMUST00000211130 88 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 140.6 ms