Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm26406-201ENSMUST00000158503 124 ntBASIC2.27□□□□□ -2.05
Col8a1Q00780 Gm25488-201ENSMUST00000158728 118 ntBASIC2.27□□□□□ -2.05
Col8a1Q00780 Mir3094-201ENSMUST00000175121 64 ntBASIC2.27□□□□□ -2.05
Col8a1Q00780 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.27□□□□□ -2.05
Col8a1Q00780 Mir7226-201ENSMUST00000184953 60 ntBASIC2.27□□□□□ -2.05
Col8a1Q00780 Gm28669-201ENSMUST00000188400 100 ntBASIC2.27□□□□□ -2.05
Col8a1Q00780 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.27□□□□□ -2.05
Col8a1Q00780 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.27□□□□□ -2.05
Col8a1Q00780 Gm22354-201ENSMUST00000083919 70 ntBASIC2.27□□□□□ -2.05
Col8a1Q00780 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.27□□□□□ -2.05
Col8a1Q00780 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Col8a1Q00780 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Col8a1Q00780 Snord78-201ENSMUST00000104032 66 ntBASIC2.26□□□□□ -2.05
Col8a1Q00780 Gm24126-201ENSMUST00000104111 106 ntBASIC2.26□□□□□ -2.05
Col8a1Q00780 Gm25878-201ENSMUST00000104327 93 ntBASIC2.26□□□□□ -2.05
Col8a1Q00780 Gm23803-201ENSMUST00000104610 132 ntBASIC2.26□□□□□ -2.05
Col8a1Q00780 Gm14674-201ENSMUST00000117816 342 ntBASIC2.26□□□□□ -2.05
Col8a1Q00780 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.26□□□□□ -2.05
Col8a1Q00780 Mir6997-201ENSMUST00000184313 71 ntBASIC2.26□□□□□ -2.05
Col8a1Q00780 Gm23790-201ENSMUST00000083013 107 ntBASIC2.26□□□□□ -2.05
Col8a1Q00780 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
Col8a1Q00780 Snord93-201ENSMUST00000175580 71 ntBASIC2.25□□□□□ -2.05
Col8a1Q00780 Gm27582-201ENSMUST00000184084 126 ntBASIC2.25□□□□□ -2.05
Col8a1Q00780 Gm44491-201ENSMUST00000196794 96 ntBASIC2.25□□□□□ -2.05
Col8a1Q00780 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.25□□□□□ -2.05
Col8a1Q00780 Mir322-201ENSMUST00000083484 95 ntBASIC2.25□□□□□ -2.05
Col8a1Q00780 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.25□□□□□ -2.05
Col8a1Q00780 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.25□□□□□ -2.05
Col8a1Q00780 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Col8a1Q00780 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Col8a1Q00780 Gm22772-201ENSMUST00000104451 121 ntBASIC2.24□□□□□ -2.05
Col8a1Q00780 Gm26473-201ENSMUST00000116763 127 ntBASIC2.24□□□□□ -2.05
Col8a1Q00780 Gm15272-201ENSMUST00000120865 233 ntBASIC2.24□□□□□ -2.05
Col8a1Q00780 Gm16355-201ENSMUST00000128606 231 ntBASIC2.24□□□□□ -2.05
Col8a1Q00780 Gm22416-201ENSMUST00000158590 88 ntBASIC2.24□□□□□ -2.05
Col8a1Q00780 Gm25119-201ENSMUST00000158815 88 ntBASIC2.24□□□□□ -2.05
Col8a1Q00780 Gm23548-201ENSMUST00000158963 106 ntBASIC2.24□□□□□ -2.05
Col8a1Q00780 Mir6406-201ENSMUST00000183592 120 ntBASIC2.24□□□□□ -2.05
Col8a1Q00780 Gm27446-201ENSMUST00000183963 89 ntBASIC2.24□□□□□ -2.05
Col8a1Q00780 Mir7017-201ENSMUST00000184894 62 ntBASIC2.24□□□□□ -2.05
Col8a1Q00780 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC2.24□□□□□ -2.05
Col8a1Q00780 Gm35736-201ENSMUST00000203681 313 ntBASIC2.24□□□□□ -2.05
Col8a1Q00780 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.24□□□□□ -2.05
Col8a1Q00780 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC2.24□□□□□ -2.05
Col8a1Q00780 Gm45288-201ENSMUST00000210236 151 ntBASIC2.24□□□□□ -2.05
Col8a1Q00780 Gm26326-201ENSMUST00000083070 129 ntBASIC2.24□□□□□ -2.05
Col8a1Q00780 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.23□□□□□ -2.05
Col8a1Q00780 Gm23950-201ENSMUST00000104026 129 ntBASIC2.23□□□□□ -2.05
Col8a1Q00780 Mir344e-201ENSMUST00000104677 66 ntBASIC2.23□□□□□ -2.05
Col8a1Q00780 Gm24632-201ENSMUST00000122770 323 ntBASIC2.23□□□□□ -2.05
Col8a1Q00780 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Col8a1Q00780 Gm24947-201ENSMUST00000158334 110 ntBASIC2.23□□□□□ -2.05
Col8a1Q00780 Mir7026-201ENSMUST00000184384 67 ntBASIC2.23□□□□□ -2.05
Col8a1Q00780 Gm27700-201ENSMUST00000185003 81 ntBASIC2.23□□□□□ -2.05
Col8a1Q00780 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.23□□□□□ -2.05
Col8a1Q00780 Gm25636-201ENSMUST00000082666 133 ntBASIC2.23□□□□□ -2.05
Col8a1Q00780 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Col8a1Q00780 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Col8a1Q00780 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.22□□□□□ -2.05
Col8a1Q00780 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
Col8a1Q00780 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Col8a1Q00780 Gm25945-201ENSMUST00000122484 135 ntBASIC2.22□□□□□ -2.05
Col8a1Q00780 Gm25558-201ENSMUST00000158083 106 ntBASIC2.22□□□□□ -2.05
Col8a1Q00780 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.22□□□□□ -2.05
Col8a1Q00780 Mir410-201ENSMUST00000083563 81 ntBASIC2.22□□□□□ -2.05
Col8a1Q00780 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Col8a1Q00780 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Col8a1Q00780 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.22□□□□□ -2.05
Col8a1Q00780 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Col8a1Q00780 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
Col8a1Q00780 Gm24907-201ENSMUST00000116932 128 ntBASIC2.21□□□□□ -2.06
Col8a1Q00780 Gm14671-201ENSMUST00000121790 262 ntBASIC2.21□□□□□ -2.06
Col8a1Q00780 Gm26099-201ENSMUST00000157248 109 ntBASIC2.21□□□□□ -2.06
Col8a1Q00780 Gm26150-201ENSMUST00000157426 151 ntBASIC2.21□□□□□ -2.06
Col8a1Q00780 Gm23588-201ENSMUST00000157659 99 ntBASIC2.21□□□□□ -2.06
Col8a1Q00780 Gm24736-201ENSMUST00000158862 130 ntBASIC2.21□□□□□ -2.06
Col8a1Q00780 Gm22129-201ENSMUST00000179034 107 ntBASIC2.21□□□□□ -2.06
Col8a1Q00780 Mir6377-201ENSMUST00000183760 114 ntBASIC2.21□□□□□ -2.06
Col8a1Q00780 Gm27786-201ENSMUST00000184337 70 ntBASIC2.21□□□□□ -2.06
Col8a1Q00780 Mir6928-201ENSMUST00000185166 70 ntBASIC2.21□□□□□ -2.06
Col8a1Q00780 Gm9156-201ENSMUST00000189660 463 ntBASIC2.21□□□□□ -2.06
Col8a1Q00780 Mir497-201ENSMUST00000200557 84 ntBASIC2.21□□□□□ -2.06
Col8a1Q00780 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.21□□□□□ -2.06
Col8a1Q00780 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC2.21□□□□□ -2.06
Col8a1Q00780 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Col8a1Q00780 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Col8a1Q00780 Gm22752-201ENSMUST00000102083 109 ntBASIC2.2□□□□□ -2.06
Col8a1Q00780 Mir542-201ENSMUST00000102186 85 ntBASIC2.2□□□□□ -2.06
Col8a1Q00780 Snora36b-201ENSMUST00000104383 132 ntBASIC2.2□□□□□ -2.06
Col8a1Q00780 Gm14937-201ENSMUST00000119709 208 ntBASIC2.2□□□□□ -2.06
Col8a1Q00780 Gm11792-201ENSMUST00000120640 168 ntBASIC2.2□□□□□ -2.06
Col8a1Q00780 Gm25887-201ENSMUST00000157777 84 ntBASIC2.2□□□□□ -2.06
Col8a1Q00780 Gm22803-201ENSMUST00000158049 283 ntBASIC2.2□□□□□ -2.06
Col8a1Q00780 Gm22540-201ENSMUST00000158168 117 ntBASIC2.2□□□□□ -2.06
Col8a1Q00780 Gm23349-201ENSMUST00000158432 98 ntBASIC2.2□□□□□ -2.06
Col8a1Q00780 Mir1931-201ENSMUST00000158589 119 ntBASIC2.2□□□□□ -2.06
Col8a1Q00780 Gm27330-201ENSMUST00000184689 132 ntBASIC2.2□□□□□ -2.06
Col8a1Q00780 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.2□□□□□ -2.06
Col8a1Q00780 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Col8a1Q00780 AC127302.3-201ENSMUST00000215480 2791 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 123.1 ms