Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Snord98-201ENSMUST00000116819 65 ntBASIC-0.63□□□□□ -2.51
Cux1P53564 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC-0.63□□□□□ -2.51
Cux1P53564 Gm26022-201ENSMUST00000158663 108 ntBASIC-0.63□□□□□ -2.51
Cux1P53564 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.63□□□□□ -2.51
Cux1P53564 Gm5034-201ENSMUST00000199115 634 ntBASIC-0.63□□□□□ -2.51
Cux1P53564 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC-0.63□□□□□ -2.51
Cux1P53564 AC141438.3-201ENSMUST00000215632 202 ntBASIC-0.63□□□□□ -2.51
Cux1P53564 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
Cux1P53564 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC-0.63□□□□□ -2.51
Cux1P53564 Gm25207-201ENSMUST00000093745 107 ntBASIC-0.63□□□□□ -2.51
Cux1P53564 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC-0.63□□□□□ -2.51
Cux1P53564 Mir465c-2-201ENSMUST00000104757 81 ntBASIC-0.64□□□□□ -2.51
Cux1P53564 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.64□□□□□ -2.51
Cux1P53564 Gm25060-201ENSMUST00000157374 130 ntBASIC-0.64□□□□□ -2.51
Cux1P53564 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.64□□□□□ -2.51
Cux1P53564 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.64□□□□□ -2.51
Cux1P53564 Gm10105-201ENSMUST00000184601 270 ntBASIC-0.64□□□□□ -2.51
Cux1P53564 Gm43810-201ENSMUST00000201018 232 ntBASIC-0.64□□□□□ -2.51
Cux1P53564 Mir465c-1-201ENSMUST00000093560 81 ntBASIC-0.64□□□□□ -2.51
Cux1P53564 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.64□□□□□ -2.51
Cux1P53564 Gm24487-201ENSMUST00000178017 63 ntBASIC-0.64□□□□□ -2.51
Cux1P53564 Gm26073-201ENSMUST00000179906 127 ntBASIC-0.64□□□□□ -2.51
Cux1P53564 Mir721-201ENSMUST00000200230 88 ntBASIC-0.64□□□□□ -2.51
Cux1P53564 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC-0.65□□□□□ -2.51
Cux1P53564 Gm11386-201ENSMUST00000117761 347 ntBASIC-0.65□□□□□ -2.51
Cux1P53564 Gm22586-201ENSMUST00000157507 122 ntBASIC-0.65□□□□□ -2.51
Cux1P53564 Gm22387-201ENSMUST00000158191 131 ntBASIC-0.65□□□□□ -2.51
Cux1P53564 Gm23352-201ENSMUST00000158428 64 ntBASIC-0.65□□□□□ -2.51
Cux1P53564 Gm42857-201ENSMUST00000200823 339 ntBASIC-0.65□□□□□ -2.51
Cux1P53564 Gm36189-201ENSMUST00000204113 523 ntBASIC-0.65□□□□□ -2.51
Cux1P53564 Gm45673-201ENSMUST00000210293 358 ntBASIC-0.65□□□□□ -2.51
Cux1P53564 Gm24042-201ENSMUST00000083114 103 ntBASIC-0.65□□□□□ -2.51
Cux1P53564 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC-0.66□□□□□ -2.51
Cux1P53564 Gm22834-201ENSMUST00000102021 79 ntBASIC-0.66□□□□□ -2.52
Cux1P53564 Mir465b-1-201ENSMUST00000103940 79 ntBASIC-0.66□□□□□ -2.52
Cux1P53564 Mir465b-2-201ENSMUST00000104662 79 ntBASIC-0.66□□□□□ -2.52
Cux1P53564 Gm23111-201ENSMUST00000122652 105 ntBASIC-0.66□□□□□ -2.52
Cux1P53564 Gm23194-201ENSMUST00000158813 105 ntBASIC-0.66□□□□□ -2.52
Cux1P53564 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC-0.66□□□□□ -2.52
Cux1P53564 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.66□□□□□ -2.52
Cux1P53564 Gm26071-201ENSMUST00000083261 107 ntBASIC-0.66□□□□□ -2.52
Cux1P53564 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.66□□□□□ -2.52
Cux1P53564 Gm23041-201ENSMUST00000083868 106 ntBASIC-0.66□□□□□ -2.52
Cux1P53564 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.67□□□□□ -2.52
Cux1P53564 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-0.67□□□□□ -2.52
Cux1P53564 Gm13518-201ENSMUST00000120018 233 ntBASIC-0.67□□□□□ -2.52
Cux1P53564 Gm24198-201ENSMUST00000157812 108 ntBASIC-0.67□□□□□ -2.52
Cux1P53564 Gm25434-201ENSMUST00000158278 167 ntBASIC-0.67□□□□□ -2.52
Cux1P53564 Gm23182-201ENSMUST00000158688 135 ntBASIC-0.67□□□□□ -2.52
Cux1P53564 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.67□□□□□ -2.52
Cux1P53564 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.67□□□□□ -2.52
Cux1P53564 AL772265.1-201ENSMUST00000214379 305 ntBASIC-0.67□□□□□ -2.52
Cux1P53564 AC164629.1-201ENSMUST00000220250 1113 ntBASIC-0.67□□□□□ -2.52
Cux1P53564 Gm24043-201ENSMUST00000083108 116 ntBASIC-0.67□□□□□ -2.52
Cux1P53564 n-R5s183-201ENSMUST00000083939 115 ntBASIC-0.67□□□□□ -2.52
Cux1P53564 Gm24164-201ENSMUST00000093663 104 ntBASIC-0.67□□□□□ -2.52
Cux1P53564 AC160115.1-201ENSMUST00000224678 1574 ntBASIC-0.67□□□□□ -2.52
Cux1P53564 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
Cux1P53564 Gm22814-201ENSMUST00000157452 104 ntBASIC-0.68□□□□□ -2.52
Cux1P53564 Gm23763-201ENSMUST00000158345 60 ntBASIC-0.68□□□□□ -2.52
Cux1P53564 Gm23025-201ENSMUST00000158769 111 ntBASIC-0.68□□□□□ -2.52
Cux1P53564 Gm24111-201ENSMUST00000175491 97 ntBASIC-0.68□□□□□ -2.52
Cux1P53564 Gm24415-201ENSMUST00000180218 107 ntBASIC-0.68□□□□□ -2.52
Cux1P53564 Mir6390-201ENSMUST00000184405 129 ntBASIC-0.68□□□□□ -2.52
Cux1P53564 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.68□□□□□ -2.52
Cux1P53564 Gm44977-201ENSMUST00000205283 420 ntBASIC-0.68□□□□□ -2.52
Cux1P53564 Gm45544-201ENSMUST00000211130 88 ntBASIC-0.68□□□□□ -2.52
Cux1P53564 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC-0.68□□□□□ -2.52
Cux1P53564 Gm26384-201ENSMUST00000102183 110 ntBASIC-0.69□□□□□ -2.52
Cux1P53564 Gm20462-201ENSMUST00000172623 408 ntBASIC-0.69□□□□□ -2.52
Cux1P53564 Gm28439-201ENSMUST00000187714 876 ntBASIC-0.69□□□□□ -2.52
Cux1P53564 Gm44473-201ENSMUST00000204039 152 ntBASIC-0.69□□□□□ -2.52
Cux1P53564 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.69□□□□□ -2.52
Cux1P53564 Gm45119-201ENSMUST00000207612 199 ntBASIC-0.69□□□□□ -2.52
Cux1P53564 AC147101.1-201ENSMUST00000217964 312 ntBASIC-0.69□□□□□ -2.52
Cux1P53564 Gm26123-201ENSMUST00000083363 135 ntBASIC-0.69□□□□□ -2.52
Cux1P53564 Gm14007-201ENSMUST00000118288 210 ntBASIC-0.69□□□□□ -2.52
Cux1P53564 Gm14671-201ENSMUST00000121790 262 ntBASIC-0.69□□□□□ -2.52
Cux1P53564 Gm27540-201ENSMUST00000184950 187 ntBASIC-0.69□□□□□ -2.52
Cux1P53564 Gm23232-201ENSMUST00000157300 105 ntBASIC-0.7□□□□□ -2.52
Cux1P53564 Gm24853-201ENSMUST00000158026 121 ntBASIC-0.7□□□□□ -2.52
Cux1P53564 Gm22435-201ENSMUST00000158552 128 ntBASIC-0.7□□□□□ -2.52
Cux1P53564 Gm28506-201ENSMUST00000189937 150 ntBASIC-0.7□□□□□ -2.52
Cux1P53564 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC-0.7□□□□□ -2.52
Cux1P53564 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.71□□□□□ -2.52
Cux1P53564 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-0.71□□□□□ -2.52
Cux1P53564 Gm27993-201ENSMUST00000184362 85 ntBASIC-0.71□□□□□ -2.52
Cux1P53564 Gm38268-201ENSMUST00000195813 193 ntBASIC-0.71□□□□□ -2.52
Cux1P53564 Gm23665-201ENSMUST00000158054 62 ntBASIC-0.72□□□□□ -2.52
Cux1P53564 Gm25444-201ENSMUST00000158999 113 ntBASIC-0.72□□□□□ -2.52
Cux1P53564 Gm24818-201ENSMUST00000175093 161 ntBASIC-0.72□□□□□ -2.52
Cux1P53564 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.72□□□□□ -2.52
Cux1P53564 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.72□□□□□ -2.52
Cux1P53564 Gm44057-201ENSMUST00000204547 96 ntBASIC-0.72□□□□□ -2.52
Cux1P53564 Gm25859-201ENSMUST00000083710 91 ntBASIC-0.72□□□□□ -2.52
Cux1P53564 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC-0.73□□□□□ -2.53
Cux1P53564 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.73□□□□□ -2.53
Cux1P53564 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.73□□□□□ -2.53
Cux1P53564 Gm23404-201ENSMUST00000082543 97 ntBASIC-0.73□□□□□ -2.53
Cux1P53564 Mir377-201ENSMUST00000083504 68 ntBASIC-0.73□□□□□ -2.53
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms