Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.22□□□□□ -2.05
Shmt1P50431 mt-Tf-201ENSMUST00000082387 68 ntBASIC2.22□□□□□ -2.05
Shmt1P50431 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.21□□□□□ -2.06
Shmt1P50431 Gm26081-201ENSMUST00000104068 132 ntBASIC2.21□□□□□ -2.06
Shmt1P50431 Gm23011-201ENSMUST00000104148 132 ntBASIC2.21□□□□□ -2.06
Shmt1P50431 Gm6444-201ENSMUST00000119611 458 ntBASIC2.21□□□□□ -2.06
Shmt1P50431 Gm13588-201ENSMUST00000120026 135 ntBASIC2.21□□□□□ -2.06
Shmt1P50431 Gm7258-201ENSMUST00000179317 300 ntBASIC2.21□□□□□ -2.06
Shmt1P50431 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Shmt1P50431 Mir7026-201ENSMUST00000184384 67 ntBASIC2.21□□□□□ -2.06
Shmt1P50431 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC2.21□□□□□ -2.06
Shmt1P50431 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.21□□□□□ -2.06
Shmt1P50431 Gm25627-201ENSMUST00000084003 153 ntBASIC2.21□□□□□ -2.06
Shmt1P50431 Mir489-201ENSMUST00000093599 107 ntBASIC2.21□□□□□ -2.06
Shmt1P50431 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Shmt1P50431 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.21□□□□□ -2.06
Shmt1P50431 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Shmt1P50431 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
Shmt1P50431 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Shmt1P50431 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.2□□□□□ -2.06
Shmt1P50431 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.2□□□□□ -2.06
Shmt1P50431 Gm22213-201ENSMUST00000157564 119 ntBASIC2.2□□□□□ -2.06
Shmt1P50431 Gm23644-201ENSMUST00000157856 77 ntBASIC2.2□□□□□ -2.06
Shmt1P50431 Gm23859-201ENSMUST00000158383 64 ntBASIC2.2□□□□□ -2.06
Shmt1P50431 Gm22665-201ENSMUST00000158720 275 ntBASIC2.2□□□□□ -2.06
Shmt1P50431 Gm27443-201ENSMUST00000184660 98 ntBASIC2.2□□□□□ -2.06
Shmt1P50431 Gm42844-201ENSMUST00000200355 112 ntBASIC2.2□□□□□ -2.06
Shmt1P50431 Gm42960-201ENSMUST00000202160 241 ntBASIC2.2□□□□□ -2.06
Shmt1P50431 AC147101.2-201ENSMUST00000219756 184 ntBASIC2.2□□□□□ -2.06
Shmt1P50431 Snora69-201ENSMUST00000083708 131 ntBASIC2.2□□□□□ -2.06
Shmt1P50431 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.2□□□□□ -2.06
Shmt1P50431 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Shmt1P50431 Gm14568-201ENSMUST00000119321 294 ntBASIC2.19□□□□□ -2.06
Shmt1P50431 Gm15281-201ENSMUST00000125181 351 ntBASIC2.19□□□□□ -2.06
Shmt1P50431 Gm25884-201ENSMUST00000157782 62 ntBASIC2.19□□□□□ -2.06
Shmt1P50431 Gm24842-201ENSMUST00000158681 54 ntBASIC2.19□□□□□ -2.06
Shmt1P50431 Gm43512-201ENSMUST00000198495 176 ntBASIC2.19□□□□□ -2.06
Shmt1P50431 Mir3961-201ENSMUST00000198795 59 ntBASIC2.19□□□□□ -2.06
Shmt1P50431 Gm23509-201ENSMUST00000083080 160 ntBASIC2.19□□□□□ -2.06
Shmt1P50431 Mir9-2-201ENSMUST00000083490 72 ntBASIC2.19□□□□□ -2.06
Shmt1P50431 Mir301-201ENSMUST00000083655 86 ntBASIC2.19□□□□□ -2.06
Shmt1P50431 Mir466-201ENSMUST00000093591 73 ntBASIC2.19□□□□□ -2.06
Shmt1P50431 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Shmt1P50431 Gm26154-201ENSMUST00000102339 96 ntBASIC2.18□□□□□ -2.06
Shmt1P50431 Gm26339-201ENSMUST00000102368 99 ntBASIC2.18□□□□□ -2.06
Shmt1P50431 Gm14709-201ENSMUST00000121225 304 ntBASIC2.18□□□□□ -2.06
Shmt1P50431 Gm25558-201ENSMUST00000158083 106 ntBASIC2.18□□□□□ -2.06
Shmt1P50431 Mir1931-201ENSMUST00000158589 119 ntBASIC2.18□□□□□ -2.06
Shmt1P50431 Gm22708-201ENSMUST00000158987 103 ntBASIC2.18□□□□□ -2.06
Shmt1P50431 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.18□□□□□ -2.06
Shmt1P50431 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.18□□□□□ -2.06
Shmt1P50431 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Shmt1P50431 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.17□□□□□ -2.06
Shmt1P50431 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.17□□□□□ -2.06
Shmt1P50431 Gm24246-201ENSMUST00000157315 132 ntBASIC2.17□□□□□ -2.06
Shmt1P50431 Gm22558-201ENSMUST00000157326 95 ntBASIC2.17□□□□□ -2.06
Shmt1P50431 Gm24718-201ENSMUST00000157521 136 ntBASIC2.17□□□□□ -2.06
Shmt1P50431 Gm26345-201ENSMUST00000157534 120 ntBASIC2.17□□□□□ -2.06
Shmt1P50431 Gm22099-201ENSMUST00000157925 123 ntBASIC2.17□□□□□ -2.06
Shmt1P50431 Gm23854-201ENSMUST00000158378 108 ntBASIC2.17□□□□□ -2.06
Shmt1P50431 Gm25364-201ENSMUST00000158851 107 ntBASIC2.17□□□□□ -2.06
Shmt1P50431 Gm24177-201ENSMUST00000158927 131 ntBASIC2.17□□□□□ -2.06
Shmt1P50431 Gm22070-201ENSMUST00000178475 107 ntBASIC2.17□□□□□ -2.06
Shmt1P50431 Gm25646-201ENSMUST00000178527 79 ntBASIC2.17□□□□□ -2.06
Shmt1P50431 Mir7017-201ENSMUST00000184894 62 ntBASIC2.17□□□□□ -2.06
Shmt1P50431 Gm24038-201ENSMUST00000082872 159 ntBASIC2.17□□□□□ -2.06
Shmt1P50431 Gm42718-201ENSMUST00000197319 2681 ntBASIC2.17□□□□□ -2.06
Shmt1P50431 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.17□□□□□ -2.06
Shmt1P50431 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Shmt1P50431 Gm24894-201ENSMUST00000122744 118 ntBASIC2.16□□□□□ -2.06
Shmt1P50431 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Shmt1P50431 Gm23390-201ENSMUST00000157393 106 ntBASIC2.16□□□□□ -2.06
Shmt1P50431 Gm25889-201ENSMUST00000157775 107 ntBASIC2.16□□□□□ -2.06
Shmt1P50431 Gm23898-201ENSMUST00000158111 103 ntBASIC2.16□□□□□ -2.06
Shmt1P50431 Gm25771-201ENSMUST00000158565 144 ntBASIC2.16□□□□□ -2.06
Shmt1P50431 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.16□□□□□ -2.06
Shmt1P50431 Gm26864-201ENSMUST00000181346 156 ntBASIC2.16□□□□□ -2.06
Shmt1P50431 Mir6901-201ENSMUST00000185062 62 ntBASIC2.16□□□□□ -2.06
Shmt1P50431 Mir3569-201ENSMUST00000185080 58 ntBASIC2.16□□□□□ -2.06
Shmt1P50431 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2.16□□□□□ -2.06
Shmt1P50431 Mir34a-201ENSMUST00000083559 102 ntBASIC2.16□□□□□ -2.06
Shmt1P50431 Gm25684-201ENSMUST00000083941 107 ntBASIC2.16□□□□□ -2.06
Shmt1P50431 Snora2b-201ENSMUST00000084005 137 ntBASIC2.16□□□□□ -2.06
Shmt1P50431 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Shmt1P50431 Gm25878-201ENSMUST00000104327 93 ntBASIC2.15□□□□□ -2.07
Shmt1P50431 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.15□□□□□ -2.07
Shmt1P50431 Gm23342-201ENSMUST00000158958 115 ntBASIC2.15□□□□□ -2.07
Shmt1P50431 Gm25444-201ENSMUST00000158999 113 ntBASIC2.15□□□□□ -2.07
Shmt1P50431 Mir7009-201ENSMUST00000184519 64 ntBASIC2.15□□□□□ -2.07
Shmt1P50431 Gm25796-201ENSMUST00000082645 163 ntBASIC2.15□□□□□ -2.07
Shmt1P50431 Gm25357-201ENSMUST00000082745 72 ntBASIC2.15□□□□□ -2.07
Shmt1P50431 Snora33-201ENSMUST00000093556 129 ntBASIC2.15□□□□□ -2.07
Shmt1P50431 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Shmt1P50431 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.14□□□□□ -2.07
Shmt1P50431 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.14□□□□□ -2.07
Shmt1P50431 Gm24098-201ENSMUST00000102075 109 ntBASIC2.14□□□□□ -2.07
Shmt1P50431 Gm25381-201ENSMUST00000102078 109 ntBASIC2.14□□□□□ -2.07
Shmt1P50431 Gm25753-201ENSMUST00000116792 121 ntBASIC2.14□□□□□ -2.07
Shmt1P50431 Gm12086-201ENSMUST00000120863 228 ntBASIC2.14□□□□□ -2.07
Shmt1P50431 Gm16328-201ENSMUST00000126985 196 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 206.2 ms