Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm44326-201ENSMUST00000198226 101 ntBASIC1.72□□□□□ -2.13
Ercc3P49135 Gm43199-201ENSMUST00000200019 307 ntBASIC1.72□□□□□ -2.13
Ercc3P49135 Gm36189-201ENSMUST00000204113 523 ntBASIC1.72□□□□□ -2.13
Ercc3P49135 Gm44962-201ENSMUST00000206460 279 ntBASIC1.72□□□□□ -2.13
Ercc3P49135 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.72□□□□□ -2.13
Ercc3P49135 Gm23299-201ENSMUST00000082708 79 ntBASIC1.72□□□□□ -2.13
Ercc3P49135 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Ercc3P49135 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.71□□□□□ -2.14
Ercc3P49135 Gm23655-201ENSMUST00000122627 105 ntBASIC1.71□□□□□ -2.14
Ercc3P49135 Mir5104-201ENSMUST00000175319 94 ntBASIC1.71□□□□□ -2.14
Ercc3P49135 Gm46993-201ENSMUST00000220708 259 ntBASIC1.71□□□□□ -2.14
Ercc3P49135 Gm26225-201ENSMUST00000082508 135 ntBASIC1.71□□□□□ -2.14
Ercc3P49135 Gm22306-201ENSMUST00000082692 107 ntBASIC1.71□□□□□ -2.14
Ercc3P49135 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.71□□□□□ -2.14
Ercc3P49135 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.7□□□□□ -2.14
Ercc3P49135 Gm25538-201ENSMUST00000101943 107 ntBASIC1.7□□□□□ -2.14
Ercc3P49135 Gm23336-201ENSMUST00000117023 123 ntBASIC1.7□□□□□ -2.14
Ercc3P49135 Gm24895-201ENSMUST00000122742 74 ntBASIC1.7□□□□□ -2.14
Ercc3P49135 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.7□□□□□ -2.14
Ercc3P49135 Gm23277-201ENSMUST00000157914 136 ntBASIC1.7□□□□□ -2.14
Ercc3P49135 Gm25750-201ENSMUST00000175483 112 ntBASIC1.7□□□□□ -2.14
Ercc3P49135 Gm22862-201ENSMUST00000178593 121 ntBASIC1.7□□□□□ -2.14
Ercc3P49135 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Ercc3P49135 Gm42855-201ENSMUST00000197388 253 ntBASIC1.7□□□□□ -2.14
Ercc3P49135 Gm24929-201ENSMUST00000083403 139 ntBASIC1.7□□□□□ -2.14
Ercc3P49135 Gm26293-201ENSMUST00000104170 84 ntBASIC1.69□□□□□ -2.14
Ercc3P49135 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Ercc3P49135 Gm22477-201ENSMUST00000122569 316 ntBASIC1.69□□□□□ -2.14
Ercc3P49135 Gm24015-201ENSMUST00000157725 232 ntBASIC1.69□□□□□ -2.14
Ercc3P49135 Gm23898-201ENSMUST00000158111 103 ntBASIC1.69□□□□□ -2.14
Ercc3P49135 Mir7665-201ENSMUST00000184907 63 ntBASIC1.69□□□□□ -2.14
Ercc3P49135 Gm43602-201ENSMUST00000196772 300 ntBASIC1.69□□□□□ -2.14
Ercc3P49135 Gm22169-201ENSMUST00000083229 107 ntBASIC1.69□□□□□ -2.14
Ercc3P49135 Mir471-201ENSMUST00000093596 67 ntBASIC1.69□□□□□ -2.14
Ercc3P49135 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Ercc3P49135 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.68□□□□□ -2.14
Ercc3P49135 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Ercc3P49135 Gm23907-201ENSMUST00000104595 189 ntBASIC1.68□□□□□ -2.14
Ercc3P49135 Snord13-201ENSMUST00000157627 104 ntBASIC1.68□□□□□ -2.14
Ercc3P49135 Gm25267-201ENSMUST00000158522 63 ntBASIC1.68□□□□□ -2.14
Ercc3P49135 Traj60-201ENSMUST00000167781 54 ntBASIC1.68□□□□□ -2.14
Ercc3P49135 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.68□□□□□ -2.14
Ercc3P49135 Gm27465-201ENSMUST00000184290 91 ntBASIC1.68□□□□□ -2.14
Ercc3P49135 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.68□□□□□ -2.14
Ercc3P49135 Gm44057-201ENSMUST00000204547 96 ntBASIC1.68□□□□□ -2.14
Ercc3P49135 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC1.68□□□□□ -2.14
Ercc3P49135 Snord96a-201ENSMUST00000082791 81 ntBASIC1.68□□□□□ -2.14
Ercc3P49135 Gm26204-201ENSMUST00000082906 107 ntBASIC1.68□□□□□ -2.14
Ercc3P49135 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Ercc3P49135 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Ercc3P49135 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.67□□□□□ -2.14
Ercc3P49135 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.67□□□□□ -2.14
Ercc3P49135 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.67□□□□□ -2.14
Ercc3P49135 Gm22963-201ENSMUST00000157960 91 ntBASIC1.67□□□□□ -2.14
Ercc3P49135 Gm22802-201ENSMUST00000175621 89 ntBASIC1.67□□□□□ -2.14
Ercc3P49135 Mir6350-201ENSMUST00000183639 105 ntBASIC1.67□□□□□ -2.14
Ercc3P49135 Gm9251-201ENSMUST00000197202 628 ntBASIC1.67□□□□□ -2.14
Ercc3P49135 Gm43911-201ENSMUST00000203097 76 ntBASIC1.67□□□□□ -2.14
Ercc3P49135 Snord1a-201ENSMUST00000083160 74 ntBASIC1.67□□□□□ -2.14
Ercc3P49135 Mir490-201ENSMUST00000093567 84 ntBASIC1.67□□□□□ -2.14
Ercc3P49135 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.67□□□□□ -2.14
Ercc3P49135 Gm25495-201ENSMUST00000104431 131 ntBASIC1.66□□□□□ -2.14
Ercc3P49135 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Ercc3P49135 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.66□□□□□ -2.14
Ercc3P49135 Mir1931-201ENSMUST00000158589 119 ntBASIC1.66□□□□□ -2.14
Ercc3P49135 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Ercc3P49135 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.66□□□□□ -2.14
Ercc3P49135 Gm22686-201ENSMUST00000082847 100 ntBASIC1.66□□□□□ -2.14
Ercc3P49135 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.65□□□□□ -2.15
Ercc3P49135 Gm26049-201ENSMUST00000157313 108 ntBASIC1.65□□□□□ -2.15
Ercc3P49135 Gm22559-201ENSMUST00000157329 134 ntBASIC1.65□□□□□ -2.15
Ercc3P49135 Gm25663-201ENSMUST00000157698 135 ntBASIC1.65□□□□□ -2.15
Ercc3P49135 Gm24634-201ENSMUST00000158672 107 ntBASIC1.65□□□□□ -2.15
Ercc3P49135 Gm22403-201ENSMUST00000174919 84 ntBASIC1.65□□□□□ -2.15
Ercc3P49135 Mir1a-2-201ENSMUST00000198520 72 ntBASIC1.65□□□□□ -2.15
Ercc3P49135 Gm44921-201ENSMUST00000205290 301 ntBASIC1.65□□□□□ -2.15
Ercc3P49135 Gm24523-201ENSMUST00000083965 132 ntBASIC1.65□□□□□ -2.15
Ercc3P49135 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.65□□□□□ -2.15
Ercc3P49135 Gm24379-201ENSMUST00000122695 86 ntBASIC1.64□□□□□ -2.15
Ercc3P49135 Gm23106-201ENSMUST00000157554 101 ntBASIC1.64□□□□□ -2.15
Ercc3P49135 Gm22164-201ENSMUST00000158413 106 ntBASIC1.64□□□□□ -2.15
Ercc3P49135 Mir3061-201ENSMUST00000175129 91 ntBASIC1.64□□□□□ -2.15
Ercc3P49135 Gm27285-201ENSMUST00000183875 127 ntBASIC1.64□□□□□ -2.15
Ercc3P49135 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.64□□□□□ -2.15
Ercc3P49135 Gm22884-201ENSMUST00000083127 140 ntBASIC1.64□□□□□ -2.15
Ercc3P49135 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.63□□□□□ -2.15
Ercc3P49135 Gm25464-201ENSMUST00000175481 107 ntBASIC1.63□□□□□ -2.15
Ercc3P49135 Gm44483-201ENSMUST00000197203 97 ntBASIC1.63□□□□□ -2.15
Ercc3P49135 Mir721-201ENSMUST00000200230 88 ntBASIC1.63□□□□□ -2.15
Ercc3P49135 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.63□□□□□ -2.15
Ercc3P49135 Gm24494-201ENSMUST00000083804 81 ntBASIC1.63□□□□□ -2.15
Ercc3P49135 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
Ercc3P49135 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Ercc3P49135 Gm25759-201ENSMUST00000103988 129 ntBASIC1.62□□□□□ -2.15
Ercc3P49135 Gm26082-201ENSMUST00000104070 127 ntBASIC1.62□□□□□ -2.15
Ercc3P49135 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.62□□□□□ -2.15
Ercc3P49135 Gm22929-201ENSMUST00000175517 107 ntBASIC1.62□□□□□ -2.15
Ercc3P49135 Mir6962-201ENSMUST00000199512 63 ntBASIC1.62□□□□□ -2.15
Ercc3P49135 Gm18188-201ENSMUST00000219386 478 ntBASIC1.62□□□□□ -2.15
Ercc3P49135 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 112.2 ms